Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11290_v3 Cicer arietinum L. HOM05D006356 ORTHO05D007903 0.0e+00 2520.3 1278 100.0
TPR.G13985 Trifolium pratense HOM05D006356 ORTHO05D007903 0.0e+00 2272.7 1269 90.9
Medtr1g115300 Medicago truncatula HOM05D006356 ORTHO05D007903 0.0e+00 2267.7 1276 88.6
Psat2g006960 Pisum sativum HOM05D006356 ORTHO05D007903 0.0e+00 2253.0 1269 88.7
LjContig00357g0007551 Lotus japonicus HOM05D006356 ORTHO05D007903 0.0e+00 2155.9 1278 83.9
Glyma.10G289800 Glycine max HOM05D006356 ORTHO05D007903 0.0e+00 2065.0 1268 82.0
arahy.Tifrunner.gnm1.ann1.C821YF Arachis hypogaea HOM05D006356 ORTHO05D007903 0.0e+00 2051.6 1278 80.0
VMungo0720G2582 Vigna mungo HOM05D006356 ORTHO05D007903 0.0e+00 1993.4 1267 78.9
Lalb_Chr21g0307391 Lupinus albus HOM05D006356 ORTHO05D007903 0.0e+00 1980.3 1257 78.8
Phvul.007G011700 Phaseolus vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1803.1 1128 80.1
Haze_17035 Corylus avellana HOM05D006356 ORTHO05D007903 0.0e+00 1746.1 1270 68.7
QL08p059009 Quercus lobata HOM05D006356 ORTHO05D007903 0.0e+00 1742.6 1270 68.7
Cfa001508 Carpinus fangiana HOM05D006356 ORTHO05D007903 0.0e+00 1732.2 1270 68.4
Potri.010G208400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1728.0 1282 67.2
CSS0015977 Camellia sinensis var. sinensis HOM05D006356 ORTHO05D007903 0.0e+00 1706.4 1258 68.0
RcHm_v2.0_Chr1g0366221 Rosa chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1706.0 1269 69.0
Atru.BG.253.p Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1705.6 1251 69.6
Potri.008G052400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1704.1 1254 68.1
FvH4_7g21920 Fragaria vesca HOM05D006356 ORTHO05D007903 0.0e+00 1702.2 1270 67.2
FAN01G2014 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1701.8 1270 67.2
Ciclev10030528m.g Citrus clementina HOM05D006356 ORTHO05D007903 0.0e+00 1701.0 1269 69.0
FAN06G1346 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1700.6 1270 67.2
Gohir.D10G224900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1700.6 1275 68.3
Sabra08G0037700 Salix brachista HOM05D006356 ORTHO05D007903 0.0e+00 1699.9 1254 67.9
FAN03G2412 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1698.3 1270 66.9
Prupe.2G231100 Prunus persica HOM05D006356 ORTHO05D007903 0.0e+00 1692.9 1269 69.0
FAN10G4053 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1688.7 1270 66.6
Gorai.011G255900 Gossypium raimondii HOM05D006356 ORTHO05D007903 0.0e+00 1688.7 1275 68.1
Duzib106G0492 Durio zibethinus HOM05D006356 ORTHO05D007903 0.0e+00 1684.5 1277 67.8
MD07G1193500 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1683.7 1275 67.7
Actinidia07718 Actinidia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1682.5 1275 67.3
FAN06G1693 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1680.6 1243 67.6
Thecc.10G046600 Theobroma cacao HOM05D006356 ORTHO05D007903 0.0e+00 1679.8 1275 67.9
Gohir.A10G215900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1672.1 1242 69.0
CANSAT56G2020 Cannabis sativa HOM05D006356 ORTHO05D007903 0.0e+00 1669.8 1276 67.0
TWI38G0752 Tripterygium wilfordii HOM05D006356 ORTHO05D007903 0.0e+00 1669.4 1269 66.5
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 0.0e+00 1659.4 1285 64.9
TAR369G0783 Trochodendron aralioides HOM05D006356 ORTHO05D007903 0.0e+00 1657.5 1276 65.8
MD01G1123800 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1652.5 1272 66.8
Rhsim09G0107200 Rhododendron simsii HOM05D006356 ORTHO05D007903 0.0e+00 1652.5 1271 64.9
vmacro07156 Vaccinium macrocarpon HOM05D006356 ORTHO05D007903 0.0e+00 1635.9 1268 64.6
ClCG09G020060 Citrullus lanatus HOM05D006356 ORTHO05D007903 0.0e+00 1612.4 1259 64.9
PGR044G1537 Punica granatum HOM05D006356 ORTHO05D007903 0.0e+00 1611.3 1276 63.2
MELO3C025450.2 Cucumis melo HOM05D006356 ORTHO05D007903 0.0e+00 1597.0 1259 63.9
Peaxi162Scf00015g01616 Petunia axillaris HOM05D006356 ORTHO05D007903 0.0e+00 1589.7 1254 64.0
Eucgr.J00045 Eucalyptus grandis HOM05D006356 ORTHO05D007903 0.0e+00 1580.1 1274 64.4
PGSC0003DMG400023520 Solanum tuberosum HOM05D006356 ORTHO05D007903 0.0e+00 1578.5 1255 63.7
Nitab4.5_0001831g0090 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1577.4 1276 63.1
Nitab4.5_0006342g0010 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1577.0 1301 61.7
CAN.G1013.4 Capsicum annuum HOM05D006356 ORTHO05D007903 0.0e+00 1572.8 1255 63.5
EL10Ac2g03426 Beta vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1569.7 1267 62.0
Hund20019 Selenicereus undatus HOM05D006356 ORTHO05D007903 0.0e+00 1567.7 1263 62.3
MBI14_g24317_MAGBIO Magnolia biondii HOM05D006356 ORTHO05D007903 0.0e+00 1567.0 1284 63.1
Nn2g12928 Nelumbo nucifera HOM05D006356 ORTHO05D007903 0.0e+00 1561.6 1280 61.4
Solyc05g054630.4 Solanum lycopersicum HOM05D006356 ORTHO05D007903 0.0e+00 1561.2 1255 62.8
DCAR_027666 Daucus carota HOM05D006356 ORTHO05D007903 0.0e+00 1559.3 1257 62.2
AUR62040952 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1556.2 1266 62.9
Ah.16g107390 Amaranthus hybridus HOM05D006356 ORTHO05D007903 0.0e+00 1555.4 1265 61.4
PSO675G9381 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1554.3 1276 62.5
Sopen05g033110 Solanum pennellii HOM05D006356 ORTHO05D007903 0.0e+00 1553.5 1242 63.2
Sc20g0002610 Simmondsia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1546.6 1267 61.6
PSO541G4186 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1542.7 1270 62.2
Cc02_g08190 Coffea canephora HOM05D006356 ORTHO05D007903 0.0e+00 1541.2 1273 61.7
GSVIVG01016590001 Vitis vinifera HOM05D006356 ORTHO05D007903 0.0e+00 1530.0 1269 62.1
Manes.07G113200 Manihot esculenta HOM05D006356 ORTHO05D007903 0.0e+00 1528.8 1098 69.2
Atru.chr12.503 Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1527.7 1093 70.4
THA.LOC104799353 Tarenaya hassleriana HOM05D006356 ORTHO05D007903 0.0e+00 1521.1 1267 62.4
Aqoxy4G02989 Aquilegia oxysepala HOM05D006356 ORTHO05D007903 0.0e+00 1520.0 1290 61.5
Migut.H00419 Erythranthe guttata HOM05D006356 ORTHO05D007903 0.0e+00 1500.7 1274 61.2
A10p24610 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1466.8 1259 59.3
BraA10t44524Z Brassica rapa HOM05D006356 ORTHO05D007903 0.0e+00 1466.8 1259 59.3
ECA233G4627 Erigeron canadensis HOM05D006356 ORTHO05D007903 0.0e+00 1466.8 1273 59.8
Thhalv10012453m.g Eutrema salsugineum HOM05D006356 ORTHO05D007903 0.0e+00 1462.2 1268 59.6
C09p63420 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1461.8 1260 59.8
SGA_v2.0_scaffold204G41568 Striga asiatica HOM05D006356 ORTHO05D007903 0.0e+00 1461.8 1264 59.2
BolC9t59188H Brassica oleracea HOM05D006356 ORTHO05D007903 0.0e+00 1457.2 1262 59.6
AL6G24290 Arabidopsis lyrata HOM05D006356 ORTHO05D007903 0.0e+00 1453.7 1267 59.0
Sp6g30340 Schrenkiella parvula HOM05D006356 ORTHO05D007903 0.0e+00 1445.3 1266 59.1
AT5G13680 Arabidopsis thaliana HOM05D006356 ORTHO05D007903 0.0e+00 1441.8 1281 58.4
AUR62038374 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1438.3 1134 64.2
Carub.0006s1184 Capsella rubella HOM05D006356 ORTHO05D007903 0.0e+00 1428.7 1266 58.6
CsaV3_5G026400 Cucumis sativus L. HOM05D006356 ORTHO05D007903 0.0e+00 1428.3 1105 64.1
Sed0005812 Sechium edule HOM05D006356 ORTHO05D007903 0.0e+00 1421.4 1090 65.2
Aa31sc144G30 Aethionema arabicum HOM05D006356 ORTHO05D007903 0.0e+00 1405.6 1297 55.8
Lsat_1_v5_gn_8_16481 Lactuca sativa HOM05D006356 ORTHO05D007903 0.0e+00 1404.8 1272 58.6
Dinv31432 Davidia involucrata HOM05D006356 ORTHO05D007903 0.0e+00 1401.0 1230 62.0
HanXRQChr08g0220321 Helianthus annuus HOM05D006356 ORTHO05D007903 0.0e+00 1397.9 1267 57.9
BcaC04g24267 Brassica carinata HOM05D006356 ORTHO05D007903 0.0e+00 1390.2 1268 57.0
Os07g0563700 Oryza sativa ssp. japonica HOM05D006356 ORTHO05D007903 0.0e+00 1379.4 1286 55.8
Zm00001eb082380 Zea mays HOM05D006356 ORTHO05D007903 0.0e+00 1359.4 1281 54.3
CARHR199760 Cardamine hirsuta HOM05D006356 ORTHO05D007903 0.0e+00 1348.2 1146 60.4
Oeu016021.3 Olea europaea HOM05D006356 ORTHO05D007903 0.0e+00 1321.2 1500 49.1
HPP92_012583 Vanilla planifolia HOM05D006356 ORTHO05D007903 0.0e+00 1274.2 1269 53.5
ATR0559G370 Amborella trichopoda HOM05D006356 ORTHO05D007903 0.0e+00 1273.8 1301 52.6
COL.COLO4_14974 Corchorus olitorius HOM05D006356 ORTHO05D007903 0.0e+00 1227.2 1270 52.9
CiPaw.01G284000 Carya illinoinensis HOM05D006356 ORTHO05D007903 0.0e+00 1193.3 884 67.2
CDE04G3644 Ceratophyllum demersum HOM05D006356 ORTHO05D007903 0.0e+00 1104.7 1278 49.8
Hma1.2p1_0533F.1_g173660 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 0.0e+00 1104.0 862 65.1
Cpa.g.sc1.373 Carica papaya HOM05D006356 ORTHO05D007903 0.0e+00 1091.3 853 63.7
SEGI_26197 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 0.0e+00 1077.4 1203 48.2
Hma1.2p1_0533F.1_g173650 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 2.7e-295 1019.2 754 67.9
Mapoly0015s0194 Marchantia polymorpha HOM05D006356 ORTHO05D007903 4.4e-253 879.0 1295 39.8
AagrBONN_evm.TU.Sc2ySwM_362.1673 Anthoceros agrestis HOM05D006356 ORTHO05D007903 4.4e-229 799.3 1154 40.1
SMO352G0087 Selaginella moellendorffii HOM05D006356 ORTHO05D007903 1.7e-228 797.3 1272 39.4
Pp3c8_3890 Physcomitrium patens HOM05D006356 ORTHO05D007903 6.1e-223 778.9 1158 40.2
unitig_736.g22670 Utricularia gibba HOM05D006356 ORTHO05D007903 3.4e-221 773.1 794 50.3
SEGI_10512 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 1.3e-209 734.6 770 51.8
CBR_g230 Chara braunii HOM05D006356 ORTHO05D007903 5.3e-158 563.1 1507 30.1
arahy.Tifrunner.gnm1.ann1.1A0WRJ Arachis hypogaea HOM05D006356 ORTHO05D007903 1.2e-141 508.8 331 74.6
unitig_736.g22669 Utricularia gibba HOM05D006356 ORTHO05D007903 8.5e-140 502.7 457 59.3
Cpa.g.sc1.372 Carica papaya HOM05D006356 ORTHO05D007903 1.0e-132 479.2 355 68.7
Psat2g034240 Pisum sativum HOM05D006356 ORTHO05D007903 6.7e-129 466.5 626 47.0
MCO05G525 Micromonas commoda HOM05D006356 ORTHO05D007903 2.1e-90 338.6 1369 27.1
Psat0s3149g0040 Pisum sativum HOM05D006356 ORTHO05D007903 6.2e-90 337.0 208 81.2
Psat0s3149g0080 Pisum sativum HOM05D006356 ORTHO05D007903 8.9e-89 333.2 230 74.3
Cre08.g372500 Chlamydomonas reinhardtii HOM05D006356 ORTHO05D007903 5.8e-88 330.5 1533 26.2
Nn4g26017 Nelumbo nucifera HOM05D006356 ORTHO05D007903 3.1e-81 308.1 249 57.4
TAR225G0003 Trochodendron aralioides HOM05D002467 ORTHO05D003907 9.6e-67 260.0 1167 25.3
Hma1.2p1_0529F.1_g173120 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 3.8e-63 248.1 196 66.8
Actinidia02967 Actinidia chinensis HOM05D006356 ORTHO05D007903 4.9e-63 247.7 260 55.0
Psat6g224200 Pisum sativum HOM05D006356 ORTHO05D007903 6.9e-57 227.3 167 73.7
Psat0s4636g0040 Pisum sativum HOM05D006356 ORTHO05D007903 1.3e-52 213.0 132 83.3
Hma1.2p1_0248F.1_g102020 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 1.3e-47 196.4 167 63.5
Lj5g0016728 Lotus japonicus HOM05D006356 ORTHO05D007903 1.7e-47 196.1 138 75.4
PRCOL_00001522 Prasinoderma coloniale HOM05D006356 ORTHO05D007903 5.5e-46 191.0 1356 24.9
AUR62038375 Chenopodium quinoa HOM05D006356 ORTHO05D007903 3.3e-27 128.6 110 59.1


User provided reference genes

Program Settings