Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10408_v3 Cicer arietinum L. HOM05D003810 ORTHO05D004416 0.0e+00 1208.4 616 100.0
TPR.G13386 Trifolium pratense HOM05D003810 ORTHO05D004416 1.0e-295 1019.6 616 85.9
Medtr1g090110 Medicago truncatula HOM05D003810 ORTHO05D004416 9.0e-289 996.5 615 83.9
Psat6g170400 Pisum sativum HOM05D003810 ORTHO05D004416 2.9e-287 991.5 616 83.3
Phvul.007G134900 Phaseolus vulgaris HOM05D003810 ORTHO05D004416 1.1e-286 989.6 617 82.7
VMungo0720G2836 Vigna mungo HOM05D003810 ORTHO05D004416 6.1e-285 983.8 618 82.4
Lj5g0018758 Lotus japonicus HOM05D003810 ORTHO05D004416 1.3e-282 976.1 611 82.7
Glyma.20G197500 Glycine max HOM05D003810 ORTHO05D004416 9.0e-281 969.9 616 80.4
arahy.Tifrunner.gnm1.ann1.KKS8QY Arachis hypogaea HOM05D003810 ORTHO05D004416 2.3e-276 955.3 612 80.7
Medtr6g071555 Medicago truncatula HOM05D003810 ORTHO05D004416 1.5e-264 916.0 616 78.7
Glyma.10G193000 Glycine max HOM05D003810 ORTHO05D004416 5.2e-260 901.0 616 76.9
arahy.Tifrunner.gnm1.ann1.60T2A8 Arachis hypogaea HOM05D003810 ORTHO05D004416 1.2e-256 889.8 612 76.3
CANSAT11G0157 Cannabis sativa HOM05D003810 ORTHO05D004416 1.9e-217 759.6 630 62.9
Cfa016940 Carpinus fangiana HOM05D003810 ORTHO05D004416 3.2e-217 758.8 632 63.0
Sed0019869 Sechium edule HOM05D003810 ORTHO05D004416 7.8e-216 754.2 623 62.6
CsaV3_4G027560 Cucumis sativus L. HOM05D003810 ORTHO05D004416 2.3e-215 752.7 623 62.8
MELO3C020474.2 Cucumis melo HOM05D003810 ORTHO05D004416 3.3e-214 748.8 623 62.4
QL08p001596 Quercus lobata HOM05D003810 ORTHO05D004416 3.3e-214 748.8 640 62.3
GSVIVG01014785001 Vitis vinifera HOM05D003810 ORTHO05D004416 3.7e-210 735.3 631 62.4
Thecc.09G267400 Theobroma cacao HOM05D003810 ORTHO05D004416 4.9e-210 734.9 626 61.0
Haze_09895 Corylus avellana HOM05D003810 ORTHO05D004416 5.4e-209 731.5 628 62.3
RcHm_v2.0_Chr7g0221221 Rosa chinensis HOM05D003810 ORTHO05D004416 7.1e-209 731.1 623 60.2
Gohir.D07G118250 Gossypium hirsutum HOM05D003810 ORTHO05D004416 2.3e-207 726.1 626 60.4
CiPaw.11G208700 Carya illinoinensis HOM05D003810 ORTHO05D004416 1.1e-206 723.8 624 61.9
Duzib150G1314 Durio zibethinus HOM05D003810 ORTHO05D004416 7.3e-206 721.1 626 60.5
Prupe.1G583500 Prunus persica HOM05D003810 ORTHO05D004416 9.6e-206 720.7 633 60.3
Gorai.001G127200 Gossypium raimondii HOM05D003810 ORTHO05D004416 1.2e-205 720.3 627 60.3
MD15G1441400 Malus domestica HOM05D003810 ORTHO05D004416 5.8e-203 711.4 621 61.7
FAN04G0096 Fragaria x ananassa HOM05D003810 ORTHO05D004416 4.6e-200 701.8 625 58.9
ClCG04G003010 Citrullus lanatus HOM05D003810 ORTHO05D004416 1.5e-195 686.8 624 58.5
CSS0024914 Camellia sinensis var. sinensis HOM05D003810 ORTHO05D004416 4.9e-194 681.8 631 58.3
Ciclev10007802m.g Citrus clementina HOM05D003810 ORTHO05D004416 3.2e-193 679.1 630 57.6
Rhsim04G0009500 Rhododendron simsii HOM05D003810 ORTHO05D004416 7.1e-193 677.9 629 57.6
Eucgr.J01409 Eucalyptus grandis HOM05D003810 ORTHO05D004416 6.0e-192 674.9 630 56.3
COL.COLO4_25217 Corchorus olitorius HOM05D003810 ORTHO05D004416 3.9e-191 672.2 623 58.3
FAN08G2973 Fragaria x ananassa HOM05D003810 ORTHO05D004416 3.9e-191 672.2 625 57.6
MSTRG.13036 Avicennia marina HOM05D003810 ORTHO05D004416 1.6e-189 666.8 631 56.7
FAN18G3759 Fragaria x ananassa HOM05D003810 ORTHO05D004416 1.6e-189 666.8 748 49.7
Atru.chr2.3847 Acer truncatum HOM05D003810 ORTHO05D004416 1.4e-188 663.7 629 57.2
HanXRQChr05g0160211 Helianthus annuus HOM05D003810 ORTHO05D004416 2.6e-187 659.4 621 56.4
PGR042G2745 Punica granatum HOM05D003810 ORTHO05D004416 1.1e-185 654.1 632 54.7
FvH4_5g28910 Fragaria vesca HOM05D003810 ORTHO05D004416 2.7e-184 649.4 560 59.3
Cc00_g20590 Coffea canephora HOM05D003810 ORTHO05D004416 1.3e-183 647.1 626 56.5
Dinv40895 Davidia involucrata HOM05D003810 ORTHO05D004416 1.8e-183 646.7 599 59.3
Hma1.2p1_0193F.1_g084130 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 8.7e-183 644.4 647 55.5
Atru.chr12.1053 Acer truncatum HOM05D003810 ORTHO05D004416 2.5e-182 642.9 619 56.5
Sc14g0003560 Simmondsia chinensis HOM05D003810 ORTHO05D004416 1.8e-180 636.7 626 55.1
TWI23G0485 Tripterygium wilfordii HOM05D003810 ORTHO05D004416 6.9e-180 634.8 629 54.5
Lalb_Chr06g0169751 Lupinus albus HOM05D003810 ORTHO05D004416 3.4e-179 632.5 419 77.8
ECA246G2898 Erigeron canadensis HOM05D003810 ORTHO05D004416 2.2e-178 629.8 627 54.1
THA.LOC104815683 Tarenaya hassleriana HOM05D003810 ORTHO05D004416 2.2e-178 629.8 628 55.3
Peaxi162Scf00212g00616 Petunia axillaris HOM05D003810 ORTHO05D004416 3.8e-178 629.0 631 53.6
Cpa.g.sc181.12 Carica papaya HOM05D003810 ORTHO05D004416 6.5e-178 628.2 593 57.3
Actinidia00838 Actinidia chinensis HOM05D003810 ORTHO05D004416 8.4e-178 627.9 583 58.3
Nitab4.5_0001622g0070 Nicotiana tabacum HOM05D003810 ORTHO05D004416 8.4e-178 627.9 626 54.5
vmacro22299 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 8.4e-178 627.9 761 48.6
PSO782G5597 Papaver somniferum HOM05D003810 ORTHO05D004416 9.3e-177 624.4 626 54.6
PSO063G0853 Papaver somniferum HOM05D003810 ORTHO05D004416 1.2e-176 624.0 626 54.6
Aqoxy3G00950 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 2.1e-176 623.2 635 54.3
AL1G63840 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 3.5e-176 622.5 624 54.6
CAN.G492.44 Capsicum annuum HOM05D003810 ORTHO05D004416 4.6e-176 622.1 631 53.4
Nitab4.5_0000611g0250 Nicotiana tabacum HOM05D003810 ORTHO05D004416 1.0e-175 620.9 626 54.0
Aa31LG10G490 Aethionema arabicum HOM05D003810 ORTHO05D004416 3.9e-175 619.0 625 53.6
Sp5g24310 Schrenkiella parvula HOM05D003810 ORTHO05D004416 8.7e-175 617.8 615 54.1
AUR62017624 Chenopodium quinoa HOM05D003810 ORTHO05D004416 1.5e-174 617.1 620 55.3
Sopen10g001850 Solanum pennellii HOM05D003810 ORTHO05D004416 1.5e-174 617.1 626 53.8
Solyc10g005900.3 Solanum lycopersicum HOM05D003810 ORTHO05D004416 2.5e-174 616.3 626 53.8
Carub.0001s4426 Capsella rubella HOM05D003810 ORTHO05D004416 1.3e-173 614.0 625 53.4
BcaB05g24435 Brassica carinata HOM05D003810 ORTHO05D004416 1.6e-173 613.6 615 54.3
Thhalv10011333m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 2.1e-173 613.2 633 53.2
CARHR045410 Cardamine hirsuta HOM05D003810 ORTHO05D004416 1.4e-172 610.5 628 53.2
MBI15_g00877_MAGBIO Magnolia biondii HOM05D003810 ORTHO05D004416 1.5e-171 607.1 629 54.2
BcaC03g15064 Brassica carinata HOM05D003810 ORTHO05D004416 4.5e-171 605.5 613 53.8
Migut.H01729 Erythranthe guttata HOM05D003810 ORTHO05D004416 4.5e-171 605.5 620 53.4
ATR0751G036 Amborella trichopoda HOM05D003810 ORTHO05D004416 7.6e-171 604.7 622 53.1
C02p26210 Brassica napus HOM05D003810 ORTHO05D004416 2.9e-170 602.8 613 53.7
BolC2t08687H Brassica oleracea HOM05D003810 ORTHO05D004416 2.9e-170 602.8 613 53.7
Ah.01g013210 Amaranthus hybridus HOM05D003810 ORTHO05D004416 1.4e-169 600.5 634 53.9
Sabra07G0088100 Salix brachista HOM05D003810 ORTHO05D004416 2.5e-169 599.7 695 49.9
AT3G61420 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 4.2e-169 599.0 612 53.6
A02p15760 Brassica napus HOM05D003810 ORTHO05D004416 4.2e-169 599.0 614 53.3
Manes.02G224100 Manihot esculenta HOM05D003810 ORTHO05D004416 9.3e-169 597.8 577 56.5
BraA02t06637Z Brassica rapa HOM05D003810 ORTHO05D004416 1.6e-168 597.0 614 53.3
Nn2g14662 Nelumbo nucifera HOM05D003810 ORTHO05D004416 3.6e-168 595.9 636 52.8
DCAR_017597 Daucus carota HOM05D003810 ORTHO05D004416 7.9e-168 594.7 630 52.5
vmacro09609 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 3.9e-167 592.4 732 48.0
Oeu062684.4 Olea europaea HOM05D003810 ORTHO05D004416 2.5e-166 589.7 725 48.0
EL10Ac9g22878 Beta vulgaris HOM05D003810 ORTHO05D004416 4.3e-166 589.0 641 52.3
AL5G43720 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 5.3e-164 582.0 604 53.3
Aqoxy2G00893 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 9.0e-164 581.3 637 52.1
Lsat_1_v5_gn_1_66020 Lactuca sativa HOM05D003810 ORTHO05D004416 1.4e-159 567.4 633 51.7
Os08g0338200 Oryza sativa ssp. japonica HOM05D003810 ORTHO05D004416 1.4e-159 567.4 626 50.0
HPP92_028601 Vanilla planifolia HOM05D003810 ORTHO05D004416 3.9e-159 565.8 623 51.5
AUR62015172 Chenopodium quinoa HOM05D003810 ORTHO05D004416 1.1e-156 557.8 620 52.6
Lj3A773G17 Lonicera japonica HOM05D003810 ORTHO05D004416 3.1e-156 556.2 640 50.0
FAN14G4445 Fragaria x ananassa HOM05D003810 ORTHO05D004416 1.7e-154 550.4 628 50.0
Potri.007G107400 Populus trichocarpa HOM05D003810 ORTHO05D004416 2.7e-152 543.1 564 53.9
AT1G55750 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 3.9e-151 539.3 555 53.5
CDE04G2581 Ceratophyllum demersum HOM05D003810 ORTHO05D004416 5.2e-151 538.9 635 50.2
unitig_61.g26129 Utricularia gibba HOM05D003810 ORTHO05D004416 4.1e-148 529.3 618 48.9
SGA_v2.0_scaffold146G36126 Striga asiatica HOM05D003810 ORTHO05D004416 2.5e-145 520.0 616 48.7
SGA_v2.0_scaffold42G15939 Striga asiatica HOM05D003810 ORTHO05D004416 2.3e-143 513.5 695 44.3
Lj3C711T10 Lonicera japonica HOM05D003810 ORTHO05D004416 4.8e-141 505.8 508 54.7
Dinv10375 Davidia involucrata HOM05D003810 ORTHO05D004416 8.2e-141 505.0 618 49.5
Lsat_1_v5_gn_9_33460 Lactuca sativa HOM05D003810 ORTHO05D004416 1.8e-135 487.3 630 46.3
Aqoxy7G03331 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 3.0e-135 486.5 512 52.3
Duzib168G0397 Durio zibethinus HOM05D003810 ORTHO05D004416 8.8e-135 485.0 456 57.0
FvH4_6g25000 Fragaria vesca HOM05D003810 ORTHO05D004416 9.5e-129 464.9 435 56.3
Gohir.A07G114448 Gossypium hirsutum HOM05D003810 ORTHO05D004416 1.8e-124 450.7 383 60.8
TAR629G3163 Trochodendron aralioides HOM05D003810 ORTHO05D004416 8.6e-122 441.8 467 53.1
Zm00001eb172700 Zea mays HOM05D003810 ORTHO05D004416 2.5e-121 440.3 494 49.4
Prupe.5G213500 Prunus persica HOM05D003810 ORTHO05D004416 1.2e-118 431.4 495 50.9
BcaB07g33855 Brassica carinata HOM05D003810 ORTHO05D004416 1.7e-117 427.6 580 45.2
Mapoly0009s0093 Marchantia polymorpha HOM05D003810 ORTHO05D004416 2.2e-117 427.2 638 41.1
CiPaw.14G066900 Carya illinoinensis HOM05D003810 ORTHO05D004416 1.4e-116 424.5 374 60.2
Pp3c26_14480 Physcomitrium patens HOM05D003810 ORTHO05D004416 2.4e-116 423.7 626 39.6
AagrBONN_evm.TU.Sc2ySwM_117.3105 Anthoceros agrestis HOM05D003810 ORTHO05D004416 7.0e-116 422.2 630 39.7
TAR627G1185 Trochodendron aralioides HOM05D003810 ORTHO05D004416 2.3e-114 417.2 393 58.3
Lj1A897G41 Lonicera japonica HOM05D003810 ORTHO05D004416 2.8e-112 410.2 423 53.7
Prupe.5G046900 Prunus persica HOM05D003810 ORTHO05D004416 1.1e-108 398.3 497 49.3
Potri.005G061432 Populus trichocarpa HOM05D003810 ORTHO05D004416 4.4e-102 376.3 393 54.2
QL04p000617 Quercus lobata HOM05D003810 ORTHO05D004416 2.9e-101 373.6 440 51.4
Lalb_Chr06g0169761 Lupinus albus HOM05D003810 ORTHO05D004416 1.8e-95 354.4 200 87.5
CARHR219980 Cardamine hirsuta HOM05D003810 ORTHO05D004416 6.8e-95 352.4 397 50.6
FAN02G0111 Fragaria x ananassa HOM05D003810 ORTHO05D004416 2.2e-93 347.4 490 44.9
Thhalv10011448m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 4.9e-93 346.3 565 41.4
BcaC08g42928 Brassica carinata HOM05D003810 ORTHO05D004416 1.0e-90 338.6 514 43.2
FAN02G0356 Fragaria x ananassa HOM05D003810 ORTHO05D004416 9.6e-89 332.0 464 44.6
SMO228G0023 Selaginella moellendorffii HOM05D003810 ORTHO05D004416 2.6e-86 323.9 618 35.0
Lj3g0026478 Lotus japonicus HOM05D003810 ORTHO05D004416 4.4e-86 323.2 324 59.6
MD08G1246300 Malus domestica HOM05D003810 ORTHO05D004416 1.2e-83 315.1 256 63.7
RcHm_v2.0_Chr2g0090241 Rosa chinensis HOM05D003810 ORTHO05D004416 5.6e-73 279.6 536 38.8
FAN02G2818 Fragaria x ananassa HOM05D003810 ORTHO05D004416 3.7e-72 276.9 325 48.0
FAN09G2262 Fragaria x ananassa HOM05D003810 ORTHO05D004416 9.9e-70 268.9 401 42.1
Gohir.A07G114432 Gossypium hirsutum HOM05D003810 ORTHO05D004416 3.8e-69 266.9 217 62.2
Lj1A897G42 Lonicera japonica HOM05D003810 ORTHO05D004416 1.0e-66 258.8 197 65.5
FAN05G0299 Fragaria x ananassa HOM05D003810 ORTHO05D010162 8.2e-64 249.2 230 57.8
Potri.005G061366 Populus trichocarpa HOM05D003810 ORTHO05D004416 1.2e-62 245.4 206 60.2
BolC6t35297H Brassica oleracea HOM05D003810 ORTHO05D004416 2.6e-62 244.2 341 44.3
TAR627G1127 Trochodendron aralioides HOM05D003810 ORTHO05D004416 1.9e-60 238.0 187 62.6
CiPaw.14G066700 Carya illinoinensis HOM05D003810 ORTHO05D004416 4.3e-57 226.9 209 58.9
MD08G1246400 Malus domestica HOM05D003810 ORTHO05D004416 1.1e-52 212.2 165 63.6
SHI21694 Sapria himalayana HOM05D003810 ORTHO05D004416 4.6e-51 206.8 176 55.7
Hma1.2p1_2995F.1_g331440 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 1.9e-49 201.4 391 37.6
TPR.G30194 Trifolium pratense HOM05D003810 ORTHO05D004416 2.8e-48 197.6 197 58.9
CBR_g28523 Chara braunii HOM05D000019 ORTHO05D000002 7.7e-46 189.5 252 41.7
CAN.G306.2 Capsicum annuum HOM05D003810 ORTHO05D004416 5.0e-45 186.8 174 57.5
CAN.G306.3 Capsicum annuum HOM05D003810 ORTHO05D004416 5.0e-45 186.8 174 57.5
Hma1.2p1_2995F.1_g331430 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 9.1e-39 166.0 186 52.7
HPP92_016056 Vanilla planifolia HOM05D003810 ORTHO05D004416 9.1e-39 166.0 118 67.8
Rhsim05G0134800 Rhododendron simsii HOM05D003492 ORTHO05D005115 5.9e-38 163.3 371 34.8
Hund17709 Selenicereus undatus HOM05D003810 ORTHO05D004416 5.9e-30 136.7 371 29.9
Actinidia03659 Actinidia chinensis HOM05D003810 ORTHO05D004416 1.0e-29 136.0 138 56.5
ECA233G1945 Erigeron canadensis HOM05D000449 ORTHO05D003939 5.0e-29 133.7 263 36.1
QL12p013194 Quercus lobata HOM05D003810 ORTHO05D004416 7.2e-28 129.8 210 41.4
SMO031G0001 Selaginella moellendorffii HOM05D003810 ORTHO05D004416 9.7e-25 119.4 122 44.3
Oeu005536.2 Olea europaea HOM05D003810 ORTHO05D004416 4.8e-24 117.1 160 45.0
CAN.G790.44 Capsicum annuum HOM05D000872 ORTHO05D000777 1.5e-20 105.5 194 38.1
SHI21692 Sapria himalayana HOM05D003810 ORTHO05D004416 1.5e-20 105.5 103 54.4
TPR.G30768 Trifolium pratense HOM05D003810 ORTHO05D004416 2.7e-19 101.3 68 73.5
MCO14G434 Micromonas commoda HOM05D003810 ORTHO05D004416 3.6e-19 100.9 745 22.8
CAN.G312.5 Capsicum annuum HOM05D003810 ORTHO05D000001 1.2e-17 95.9 167 40.1
CAN.G289.45 Capsicum annuum HOM05D002177 ORTHO05D004416 5.7e-17 93.6 80 55.0
CAN.G1328.7 Capsicum annuum HOM05D003810 ORTHO05D004416 1.3e-16 92.4 76 59.2
SalBow3G3831 Salvia bowleyana HOM05D003810 ORTHO05D004416 1.3e-16 92.4 131 42.7
TAR629G2180 Trochodendron aralioides HOM05D003810 ORTHO05D004416 3.7e-16 90.9 65 64.6
SHI21696 Sapria himalayana HOM05D003810 ORTHO05D004416 1.8e-15 88.6 108 46.3
CAN.G1057.19 Capsicum annuum HOM05D000222 ORTHO05D004416 7.0e-15 86.7 156 37.8
Sabra05G0051600 Salix brachista HOM05D003810 ORTHO05D004416 2.0e-14 85.1 198 36.4
PRCOL_00004489 Prasinoderma coloniale HOM05D003810 ORTHO05D004416 7.7e-14 83.2 553 23.0
SGA_v2.0_scaffold126G33829 Striga asiatica HOM05D003810 ORTHO05D004416 1.0e-13 82.8 210 31.4
ClCG09G022970 Citrullus lanatus HOM05D003810 ORTHO05D004416 2.5e-12 78.2 66 59.1
CDE07G1690 Ceratophyllum demersum HOM05D003810 ORTHO05D004416 9.5e-12 76.3 167 35.9
MD08G1246200 Malus domestica HOM05D003810 ORTHO05D004416 1.6e-11 75.5 151 42.4
SalBow3G0229 Salvia bowleyana HOM05D003810 ORTHO05D004416 8.0e-11 73.2 105 43.8
Hund08475 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.0e-10 72.8 101 40.6
CAN.G11.19 Capsicum annuum HOM05D003810 ORTHO05D004416 1.4e-10 72.4 56 58.9
CAN.G479.68 Capsicum annuum HOM05D000222 ORTHO05D004387 3.4e-09 67.8 52 59.6
Hund17711 Selenicereus undatus HOM05D003810 ORTHO05D004416 6.3e-08 63.5 50 66.0
CAN.G523.5 Capsicum annuum HOM05D000222 ORTHO05D012343 1.4e-07 62.4 63 49.2
Lsat_1_v5_gn_2_75840 Lactuca sativa HOM05D001134 ORTHO05D004416 5.4e-07 60.5 96 39.6
CAN.G1077.9 Capsicum annuum HOM05D000222 ORTHO05D012343 1.2e-06 59.3 159 30.8
Nitab4.5_0001303g0160 Nicotiana tabacum HOM05D003810 ORTHO05D004416 3.5e-06 57.8 45 62.2
Cre10.g466550 Chlamydomonas reinhardtii HOM05D003810 ORTHO05D004416 4.5e-06 57.4 141 29.8


User provided reference genes

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