Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10190_v3 Cicer arietinum L. HOM05D007256 ORTHO05D009109 3.6e-75 284.6 128 100.0
TPR.G2616 Trifolium pratense HOM05D007256 ORTHO05D009109 4.3e-52 208.0 131 74.0
Psat1g134200 Pisum sativum HOM05D007256 ORTHO05D009109 3.7e-51 204.9 129 76.7
TPR.G2644 Trifolium pratense HOM05D007256 ORTHO05D009109 1.2e-49 199.9 136 73.5
Medtr1g084750 Medicago truncatula HOM05D007256 ORTHO05D009109 1.1e-47 193.4 132 68.9
Lj5g0000046 Lotus japonicus HOM05D007256 ORTHO05D009109 2.5e-44 182.2 140 63.6
Lalb_Chr02g0147641 Lupinus albus HOM05D007256 ORTHO05D009109 5.7e-44 181.0 134 64.2
arahy.Tifrunner.gnm1.ann1.Q851GZ Arachis hypogaea HOM05D007256 ORTHO05D009109 1.6e-43 179.5 140 59.3
Phvul.007G203900 Phaseolus vulgaris HOM05D007256 ORTHO05D009109 1.6e-43 179.5 134 64.2
VMungo0720G0365 Vigna mungo HOM05D007256 ORTHO05D009109 2.8e-43 178.7 134 64.9
arahy.Tifrunner.gnm1.ann1.H7RZSB Arachis hypogaea HOM05D007256 ORTHO05D009109 1.8e-42 176.0 140 59.3
Glyma.10G144700 Glycine max HOM05D007256 ORTHO05D009109 1.5e-41 172.9 131 64.1
Nitab4.5_0005710g0050 Nicotiana tabacum HOM05D007256 ORTHO05D009109 6.5e-40 167.5 130 58.5
CAN.G1374.8 Capsicum annuum HOM05D007256 ORTHO05D009109 3.2e-39 165.2 130 56.2
PGSC0003DMG400002748 Solanum tuberosum HOM05D007256 ORTHO05D009109 1.6e-38 162.9 130 56.2
Aqoxy2G02591 Aquilegia oxysepala HOM05D007256 ORTHO05D009109 3.0e-37 158.7 132 56.8
CiPaw.07G034000 Carya illinoinensis HOM05D007256 ORTHO05D009109 5.1e-37 157.9 131 58.8
Nitab4.5_0002783g0030 Nicotiana tabacum HOM05D007256 ORTHO05D009109 8.8e-37 157.1 149 50.3
TAR362G0938 Trochodendron aralioides HOM05D007256 ORTHO05D009109 4.3e-36 154.8 154 51.9
GSVIVG01031300001 Vitis vinifera HOM05D007256 ORTHO05D009109 4.3e-36 154.8 155 51.6
Solyc01g100990.3 Solanum lycopersicum HOM05D007256 ORTHO05D009109 5.7e-36 154.5 151 48.3
Nn4g25434 Nelumbo nucifera HOM05D007256 ORTHO05D009109 9.7e-36 153.7 150 51.3
Hma1.2p1_0052F.1_g030520 Hydrangea macrophylla HOM05D007256 ORTHO05D009109 1.3e-35 153.3 135 53.3
Peaxi162Scf00357g00431 Petunia axillaris HOM05D007256 ORTHO05D009109 3.7e-35 151.8 150 50.7
Sopen01g044450 Solanum pennellii HOM05D007256 ORTHO05D009109 3.7e-35 151.8 151 47.7
CANSAT54G0501 Cannabis sativa HOM05D007256 ORTHO05D009109 8.2e-35 150.6 153 51.0
Thecc.05G327400 Theobroma cacao HOM05D007256 ORTHO05D009109 1.1e-34 150.2 141 53.9
Gohir.D13G028200 Gossypium hirsutum HOM05D007256 ORTHO05D009109 1.8e-34 149.4 137 51.8
Gorai.013G032200 Gossypium raimondii HOM05D007256 ORTHO05D009109 1.8e-34 149.4 137 51.8
FvH4_6g08160 Fragaria vesca HOM05D007256 ORTHO05D009109 3.1e-34 148.7 140 55.0
CsaV3_1G037970 Cucumis sativus L. HOM05D007256 ORTHO05D009109 4.1e-34 148.3 157 47.8
Gohir.A13G030200 Gossypium hirsutum HOM05D007256 ORTHO05D009109 6.9e-34 147.5 137 51.1
Haze_04019 Corylus avellana HOM05D007256 ORTHO05D009109 9.1e-34 147.1 153 49.0
Prupe.6G307100 Prunus persica HOM05D007256 ORTHO05D009109 9.1e-34 147.1 152 50.7
FAN14G3866 Fragaria x ananassa HOM05D007256 ORTHO05D009109 1.2e-33 146.7 145 52.4
Ciclev10012993m.g Citrus clementina HOM05D007256 ORTHO05D009109 1.5e-33 146.4 159 49.1
COL.COLO4_05498 Corchorus olitorius HOM05D007256 ORTHO05D009109 1.5e-33 146.4 135 50.4
HanXRQChr14g0433581 Helianthus annuus HOM05D007256 ORTHO05D009109 1.5e-33 146.4 145 49.7
Cfa006739 Carpinus fangiana HOM05D007256 ORTHO05D009109 2.0e-33 146.0 131 54.2
FAN09G0386 Fragaria x ananassa HOM05D007256 ORTHO05D009109 2.0e-33 146.0 152 50.7
Lsat_1_v5_gn_2_17440 Lactuca sativa HOM05D007256 ORTHO05D009109 2.0e-33 146.0 143 50.3
QL03p009011 Quercus lobata HOM05D007256 ORTHO05D009109 4.5e-33 144.8 153 48.4
Duzib177G1002 Durio zibethinus HOM05D007256 ORTHO05D009109 5.9e-33 144.4 137 51.1
PSO210G0513 Papaver somniferum HOM05D007256 ORTHO05D009109 5.9e-33 144.4 156 49.4
Oeu060662.1 Olea europaea HOM05D007256 ORTHO05D009109 7.7e-33 144.1 160 45.6
MD12G1202300 Malus domestica HOM05D007256 ORTHO05D009109 1.0e-32 143.7 146 51.4
Eucgr.B01795 Eucalyptus grandis HOM05D007256 ORTHO05D009109 1.3e-32 143.3 151 47.7
RcHm_v2.0_Chr3g0458031 Rosa chinensis HOM05D007256 ORTHO05D009109 1.7e-32 142.9 152 49.3
FAN02G0906 Fragaria x ananassa HOM05D007256 ORTHO05D009109 2.2e-32 142.5 152 50.0
TWI12G0874 Tripterygium wilfordii HOM05D007256 ORTHO05D009109 2.2e-32 142.5 157 47.1
ClCG03G017800 Citrullus lanatus HOM05D007256 ORTHO05D009109 2.9e-32 142.1 155 47.7
SGA_v2.0_scaffold438G51636 Striga asiatica HOM05D007256 ORTHO05D009109 3.8e-32 141.7 136 50.7
EL10Ac4g09530 Beta vulgaris HOM05D007256 ORTHO05D009109 5.0e-32 141.4 138 52.2
DCAR_002110 Daucus carota HOM05D007256 ORTHO05D009109 5.0e-32 141.4 149 49.0
Migut.B00859 Erythranthe guttata HOM05D007256 ORTHO05D009109 8.5e-32 140.6 152 47.4
Zm00001eb333750 Zea mays HOM05D007256 ORTHO05D009109 8.5e-32 140.6 167 43.7
QL03p009202 Quercus lobata HOM05D007256 ORTHO05D009109 1.1e-31 140.2 153 47.1
PSO761G0366 Papaver somniferum HOM05D007256 ORTHO05D009109 1.4e-31 139.8 156 48.7
Atru.chr12.1603 Acer truncatum HOM05D007256 ORTHO05D009109 3.2e-31 138.7 179 42.5
Cc02_g35540 Coffea canephora HOM05D007256 ORTHO05D009109 3.2e-31 138.7 141 46.8
CDE08G0276 Ceratophyllum demersum HOM05D007256 ORTHO05D009109 5.5e-31 137.9 132 54.5
MSTRG.20366 Avicennia marina HOM05D007256 ORTHO05D009109 7.2e-31 137.5 159 44.7
MELO3C015247.2 Cucumis melo HOM05D000487 ORTHO05D000405 1.6e-30 136.3 153 45.8
Manes.08G108700 Manihot esculenta HOM05D007256 ORTHO05D009109 2.7e-30 135.6 157 44.6
ECA238G0534 Erigeron canadensis HOM05D007256 ORTHO05D009109 4.7e-30 134.8 159 44.7
Sed0013353 Sechium edule HOM05D007256 ORTHO05D009109 4.7e-30 134.8 153 46.4
SalBow7G1589 Salvia bowleyana HOM05D007256 ORTHO05D009109 1.0e-29 133.7 178 41.0
AUR62006795 Chenopodium quinoa HOM05D007256 ORTHO05D009109 1.4e-29 133.3 147 47.6
Duzib177G0019 Durio zibethinus HOM05D007256 ORTHO05D009109 1.4e-29 133.3 158 43.7
Potri.013G004801 Populus trichocarpa HOM05D007256 ORTHO05D009109 2.3e-29 132.5 152 46.1
QL03p009259 Quercus lobata HOM05D007256 ORTHO05D009109 6.7e-29 131.0 153 47.1
Os01g0252200 Oryza sativa ssp. japonica HOM05D007256 ORTHO05D009109 1.5e-28 129.8 168 42.3
Gorai.001G184000 Gossypium raimondii HOM05D007256 ORTHO05D009109 2.0e-28 129.4 136 47.1
unitig_699.g19800 Utricularia gibba HOM05D007256 ORTHO05D009109 7.4e-28 127.5 176 41.5
Sabra13G0003900 Salix brachista HOM05D007256 ORTHO05D009109 9.7e-28 127.1 151 46.4
SEGI_23053 Sequoiadendron giganteum HOM05D007256 ORTHO05D009109 3.7e-27 125.2 158 41.8
Pp3c18_1910 Physcomitrium patens HOM05D007256 ORTHO05D009109 8.2e-27 124.0 134 46.3
Cpa.g.sc48.207 Carica papaya HOM05D007256 ORTHO05D009109 4.5e-25 118.2 142 45.1
AL6G38610 Arabidopsis lyrata HOM05D007256 ORTHO05D009109 7.7e-25 117.5 151 43.0
HPP92_001218 Vanilla planifolia HOM05D007256 ORTHO05D009109 7.7e-25 117.5 137 44.5
BcaB04g19715 Brassica carinata HOM05D007256 ORTHO05D009109 1.3e-24 116.7 149 44.3
A09p05700 Brassica napus HOM05D007256 ORTHO05D009109 2.9e-24 115.5 152 42.1
Thhalv10005088m.g Eutrema salsugineum HOM05D007256 ORTHO05D009109 5.0e-24 114.8 148 43.9
Hund07289 Selenicereus undatus HOM05D007256 ORTHO05D009109 5.0e-24 114.8 236 30.9
THA.LOC104821748 Tarenaya hassleriana HOM05D007256 ORTHO05D009109 1.5e-23 113.2 147 42.2
Sp2g21240 Schrenkiella parvula HOM05D007256 ORTHO05D009109 1.9e-23 112.8 131 46.6
Aa31LG11G9900 Aethionema arabicum HOM05D007256 ORTHO05D009109 1.2e-22 110.2 135 45.9
AT5G26749 Arabidopsis thaliana HOM05D007256 ORTHO05D009109 1.6e-22 109.8 168 38.7
Mapoly0054s0011 Marchantia polymorpha HOM05D007256 ORTHO05D009109 2.7e-22 109.0 152 38.8
BcaC04g23634 Brassica carinata HOM05D007256 ORTHO05D009109 6.1e-22 107.8 150 41.3
C09p06290 Brassica napus HOM05D007256 ORTHO05D009109 6.1e-22 107.8 150 41.3
BraA09t36210Z Brassica rapa HOM05D007256 ORTHO05D009109 3.0e-21 105.5 169 39.6
vmacro19770 Vaccinium macrocarpon HOM05D007256 ORTHO05D009109 9.7e-20 100.5 221 30.3
Gohir.D01G139700 Gossypium hirsutum HOM05D007256 ORTHO05D009109 1.7e-19 99.8 109 46.8
BolC9t53549H Brassica oleracea HOM05D007256 ORTHO05D009109 8.2e-19 97.4 166 37.3
ATR0693G354 Amborella trichopoda HOM05D007256 ORTHO05D009109 1.1e-18 97.1 78 52.6
FAN05G3272 Fragaria x ananassa HOM05D000487 ORTHO05D000405 9.1e-18 94.0 94 52.1
Aqoxy4G00797 Aquilegia oxysepala HOM05D007256 ORTHO05D009109 3.5e-17 92.0 128 42.2
Sc09g0002500 Simmondsia chinensis HOM05D007256 ORTHO05D009109 1.0e-16 90.5 84 47.6
PGR042G2181 Punica granatum HOM05D007256 ORTHO05D009109 1.6e-14 83.2 90 46.7
Glyma.20G093702 Glycine max HOM05D007256 ORTHO05D009109 4.7e-14 81.6 68 64.7
Carub.0006s2440 Capsella rubella HOM05D007256 ORTHO05D009109 8.8e-13 77.4 81 44.4
Ah.10g027130 Amaranthus hybridus HOM05D007256 ORTHO05D009109 7.0e-10 67.8 68 45.6
Rhsim05G0121300 Rhododendron simsii HOM05D007256 ORTHO05D009109 1.2e-09 67.0 58 55.2
HPP92_001189 Vanilla planifolia HOM05D007256 ORTHO05D009109 4.5e-09 65.1 41 61.0
Nitab4.5_0000185g0380 Nicotiana tabacum HOM05D007256 ORTHO05D009109 1.0e-08 63.9 39 71.8
SHI06526 Sapria himalayana HOM05D007256 ORTHO05D009109 1.2e-06 57.0 43 48.8
CARHR186830 Cardamine hirsuta HOM05D007256 ORTHO05D009109 8.0e-06 54.3 41 58.5


User provided reference genes

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