Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09360_v3 Cicer arietinum L. HOM05D002081 ORTHO05D002088 1.6e-88 329.3 161 100.0
Ca_09361_v3 Cicer arietinum L. HOM05D002081 ORTHO05D002088 1.6e-88 329.3 161 100.0
Ca_09352_v3 Cicer arietinum L. HOM05D002081 ORTHO05D002088 2.1e-64 249.2 152 83.6
Medtr7g113620 Medicago truncatula HOM05D002081 ORTHO05D002088 8.4e-53 210.7 153 73.2
Psat3g010720 Pisum sativum HOM05D002081 ORTHO05D002088 2.7e-51 205.7 154 71.4
Lj1g0022131 Lotus japonicus HOM05D002081 ORTHO05D002088 1.3e-50 203.4 152 70.4
Phvul.006G092500 Phaseolus vulgaris HOM05D002081 ORTHO05D002088 2.0e-46 189.5 151 66.2
VMungo0540G2070 Vigna mungo HOM05D002081 ORTHO05D002088 2.0e-46 189.5 151 66.2
Glyma.03G238400 Glycine max HOM05D002081 ORTHO05D002088 3.4e-46 188.7 151 66.2
TPR.G33220 Trifolium pratense HOM05D002081 ORTHO05D002088 9.9e-46 187.2 154 66.9
Glyma.19G235900 Glycine max HOM05D002081 ORTHO05D002088 8.4e-45 184.1 151 64.9
Lalb_Chr18g0045591 Lupinus albus HOM05D002081 ORTHO05D002088 1.9e-44 183.0 154 63.6
Cfa015110 Carpinus fangiana HOM05D002081 ORTHO05D002088 2.4e-44 182.6 151 62.3
QL03p041970 Quercus lobata HOM05D002081 ORTHO05D002088 1.6e-43 179.9 152 61.2
unitig_0.g1112 Utricularia gibba HOM05D002081 ORTHO05D002088 6.0e-43 177.9 151 62.3
SalBow2G0074 Salvia bowleyana HOM05D002081 ORTHO05D002088 1.3e-42 176.8 152 60.5
Duzib177G0896 Durio zibethinus HOM05D002081 ORTHO05D002088 1.8e-42 176.4 151 60.9
Dinv40279 Davidia involucrata HOM05D002081 ORTHO05D002088 2.3e-42 176.0 152 60.5
RcHm_v2.0_Chr3g0454661 Rosa chinensis HOM05D002081 ORTHO05D002088 3.0e-42 175.6 152 59.9
Potri.005G033900 Populus trichocarpa HOM05D002081 ORTHO05D002088 3.9e-42 175.3 150 62.7
Sabra05G0035900 Salix brachista HOM05D002081 ORTHO05D002088 3.9e-42 175.3 149 62.4
Potri.013G023400 Populus trichocarpa HOM05D002081 ORTHO05D002088 5.1e-42 174.9 148 61.5
arahy.Tifrunner.gnm1.ann1.A3AWFZ Arachis hypogaea HOM05D002081 ORTHO05D002088 6.7e-42 174.5 151 61.6
arahy.Tifrunner.gnm1.ann1.NHE1TC Arachis hypogaea HOM05D002081 ORTHO05D002088 6.7e-42 174.5 151 61.6
FvH4_6g05750 Fragaria vesca HOM05D002081 ORTHO05D002088 8.7e-42 174.1 152 59.9
FAN05G1483 Fragaria x ananassa HOM05D002081 ORTHO05D002088 8.7e-42 174.1 152 59.9
FAN05G4253 Fragaria x ananassa HOM05D002081 ORTHO05D002088 8.7e-42 174.1 152 59.9
FAN09G0634 Fragaria x ananassa HOM05D002081 ORTHO05D002088 8.7e-42 174.1 152 59.9
FAN14G1729 Fragaria x ananassa HOM05D002081 ORTHO05D002088 8.7e-42 174.1 152 59.9
FAN14G5292 Fragaria x ananassa HOM05D002081 ORTHO05D002088 8.7e-42 174.1 152 59.9
MD12G1220100 Malus domestica HOM05D002081 ORTHO05D002088 8.7e-42 174.1 152 61.2
Dinv23946 Davidia involucrata HOM05D002081 ORTHO05D002088 1.1e-41 173.7 152 59.9
Nitab4.5_0005388g0090 Nicotiana tabacum HOM05D002081 ORTHO05D002088 1.1e-41 173.7 152 61.2
Prupe.6G326800 Prunus persica HOM05D002081 ORTHO05D002088 1.5e-41 173.3 152 60.5
TWI56G1185 Tripterygium wilfordii HOM05D002081 ORTHO05D002088 1.9e-41 172.9 151 60.9
Migut.I00760 Erythranthe guttata HOM05D002081 ORTHO05D002088 2.5e-41 172.6 152 59.9
Peaxi162Scf00037g00230 Petunia axillaris HOM05D002081 ORTHO05D002088 2.5e-41 172.6 152 60.5
MELO3C015325.2 Cucumis melo HOM05D002081 ORTHO05D002088 3.3e-41 172.2 155 60.0
FAN02G1310 Fragaria x ananassa HOM05D002081 ORTHO05D002088 3.3e-41 172.2 152 59.2
MD04G1206000 Malus domestica HOM05D002081 ORTHO05D002088 3.3e-41 172.2 152 60.5
THA.LOC104802804 Tarenaya hassleriana HOM05D002081 ORTHO05D002088 3.3e-41 172.2 152 57.2
GSVIVG01000042001 Vitis vinifera HOM05D002081 ORTHO05D002088 3.3e-41 172.2 152 59.2
Haze_01563 Corylus avellana HOM05D002081 ORTHO05D002088 4.3e-41 171.8 174 55.2
Eucgr.H04483 Eucalyptus grandis HOM05D002081 ORTHO05D002088 4.3e-41 171.8 151 60.3
Manes.09G166400 Manihot esculenta HOM05D002081 ORTHO05D002088 5.6e-41 171.4 151 58.3
TAR365G0117 Trochodendron aralioides HOM05D002081 ORTHO05D002088 7.4e-41 171.0 151 58.3
ClCG03G016960 Citrullus lanatus HOM05D002081 ORTHO05D002088 9.6e-41 170.6 156 59.6
Nitab4.5_0008677g0010 Nicotiana tabacum HOM05D002081 ORTHO05D002088 1.3e-40 170.2 152 59.9
AL6G39520 Arabidopsis lyrata HOM05D002081 ORTHO05D002088 1.6e-40 169.9 152 56.6
CAN.G1077.16 Capsicum annuum HOM05D002081 ORTHO05D002088 2.1e-40 169.5 152 59.9
MSTRG.22749 Avicennia marina HOM05D002081 ORTHO05D002088 2.8e-40 169.1 152 59.9
Duzib106G1630 Durio zibethinus HOM05D002081 ORTHO05D002088 2.8e-40 169.1 151 59.6
Thhalv10004745m.g Eutrema salsugineum HOM05D002081 ORTHO05D002088 2.8e-40 169.1 152 56.6
TWI12G1165 Tripterygium wilfordii HOM05D002081 ORTHO05D002088 2.8e-40 169.1 152 59.9
Sp2g20700 Schrenkiella parvula HOM05D002081 ORTHO05D002088 3.7e-40 168.7 152 56.6
Sed0004716 Sechium edule HOM05D002081 ORTHO05D002088 3.7e-40 168.7 153 58.2
Thecc.05G304600 Theobroma cacao HOM05D002081 ORTHO05D002088 3.7e-40 168.7 151 57.6
BolC1t05704H Brassica oleracea HOM05D002081 ORTHO05D002088 6.2e-40 167.9 152 56.6
PSO063G5958 Papaver somniferum HOM05D002081 ORTHO05D002088 1.1e-39 167.2 158 57.6
AT5G27490 Arabidopsis thaliana HOM05D002081 ORTHO05D002088 1.4e-39 166.8 153 56.9
CANSAT54G1741 Cannabis sativa HOM05D002081 ORTHO05D002088 1.8e-39 166.4 151 58.9
Hma1.2p1_0033F.1_g020140 Hydrangea macrophylla HOM05D002081 ORTHO05D002088 2.4e-39 166.0 152 59.2
Gohir.D13G179400 Gossypium hirsutum HOM05D002081 ORTHO05D002088 3.1e-39 165.6 155 56.1
Gorai.013G204700 Gossypium raimondii HOM05D002081 ORTHO05D002088 3.1e-39 165.6 155 56.1
PGSC0003DMG400028610 Solanum tuberosum HOM05D002081 ORTHO05D002088 5.3e-39 164.9 152 58.6
SGA_v2.0_scaffold37G14761 Striga asiatica HOM05D002081 ORTHO05D002088 5.3e-39 164.9 152 57.9
Atru.chr2.413 Acer truncatum HOM05D002081 ORTHO05D002088 6.9e-39 164.5 152 57.2
CSS0023450 Camellia sinensis var. sinensis HOM05D002081 ORTHO05D002088 6.9e-39 164.5 154 58.4
Ciclev10002100m.g Citrus clementina HOM05D002081 ORTHO05D002088 6.9e-39 164.5 153 59.5
COL.COLO4_13480 Corchorus olitorius HOM05D002081 ORTHO05D002088 6.9e-39 164.5 152 57.9
Gohir.A13G173700 Gossypium hirsutum HOM05D002081 ORTHO05D002088 6.9e-39 164.5 155 56.1
Aa31LG5G15750 Aethionema arabicum HOM05D002081 ORTHO05D002088 9.0e-39 164.1 152 55.9
Nn1g02215 Nelumbo nucifera HOM05D002081 ORTHO05D002088 9.0e-39 164.1 153 56.9
Lalb_Chr02g0148281 Lupinus albus HOM05D002081 ORTHO05D002088 2.0e-38 162.9 155 57.4
PGR083G2895 Punica granatum HOM05D002081 ORTHO05D002088 2.6e-38 162.5 154 55.2
Sc09g0003210 Simmondsia chinensis HOM05D002081 ORTHO05D002088 2.6e-38 162.5 151 57.6
Solyc01g098900.3 Solanum lycopersicum HOM05D002081 ORTHO05D002088 2.6e-38 162.5 152 57.2
Sopen01g042440 Solanum pennellii HOM05D002081 ORTHO05D002088 2.6e-38 162.5 152 57.2
Oeu029692.2 Olea europaea HOM05D002081 ORTHO05D002088 1.0e-37 160.6 152 56.6
Aqoxy5G00511 Aquilegia oxysepala HOM05D002081 ORTHO05D002088 1.3e-37 160.2 154 56.5
Lsat_1_v5_gn_3_98040 Lactuca sativa HOM05D002081 ORTHO05D002088 1.3e-37 160.2 153 58.8
Rhsim05G0142500 Rhododendron simsii HOM05D002081 ORTHO05D002088 1.3e-37 160.2 149 58.4
Lj9C31T1 Lonicera japonica HOM05D002081 ORTHO05D002088 1.7e-37 159.8 153 58.2
Phvul.007G180400 Phaseolus vulgaris HOM05D002081 ORTHO05D002088 1.7e-37 159.8 154 56.5
PGR031G0270 Punica granatum HOM05D002081 ORTHO05D002088 1.7e-37 159.8 151 55.6
vmacro19628 Vaccinium macrocarpon HOM05D002081 ORTHO05D002088 2.2e-37 159.5 153 56.9
AL3G15720 Arabidopsis lyrata HOM05D002081 ORTHO05D002088 2.9e-37 159.1 153 55.6
TAR362G0444 Trochodendron aralioides HOM05D002081 ORTHO05D002088 2.9e-37 159.1 153 57.5
Carub.0003s0453 Capsella rubella HOM05D002081 ORTHO05D002088 3.8e-37 158.7 153 55.6
CARHR079620 Cardamine hirsuta HOM05D002081 ORTHO05D002088 3.8e-37 158.7 153 55.6
Cc02_g33510 Coffea canephora HOM05D002081 ORTHO05D002088 3.8e-37 158.7 152 55.9
AT3G05280 Arabidopsis thaliana HOM05D002081 ORTHO05D002088 4.9e-37 158.3 153 55.6
Hund07065 Selenicereus undatus HOM05D002081 ORTHO05D002088 8.4e-37 157.5 151 53.6
Thhalv10021283m.g Eutrema salsugineum HOM05D002081 ORTHO05D002088 1.1e-36 157.1 153 54.9
Sp3g04130 Schrenkiella parvula HOM05D002081 ORTHO05D002088 1.4e-36 156.8 153 54.9
CsaV3_1G038980 Cucumis sativus L. HOM05D002081 ORTHO05D002088 1.9e-36 156.4 158 55.1
Gohir.D11G274600 Gossypium hirsutum HOM05D002081 ORTHO05D002088 1.9e-36 156.4 155 54.8
Gohir.A11G264400 Gossypium hirsutum HOM05D002081 ORTHO05D002088 2.5e-36 156.0 155 54.8
Gorai.007G296400 Gossypium raimondii HOM05D002081 ORTHO05D002088 2.5e-36 156.0 155 54.8
BraA03t12582Z Brassica rapa HOM05D002081 ORTHO05D002088 4.2e-36 155.2 155 52.3
A03p34080 Brassica napus HOM05D002081 ORTHO05D002088 7.1e-36 154.5 154 53.9
BNapus_Darmor_BZH_scaffold_114p00220 Brassica napus HOM05D002081 ORTHO05D002088 7.1e-36 154.5 156 54.5
Cpa.g.sc48.41 Carica papaya HOM05D002081 ORTHO05D002088 7.1e-36 154.5 152 54.6
Glyma.10G154800 Glycine max HOM05D002081 ORTHO05D002088 7.1e-36 154.5 152 55.9
HanXRQChr15g0473061 Helianthus annuus HOM05D002081 ORTHO05D002088 7.1e-36 154.5 153 56.2
BcaB04g21452 Brassica carinata HOM05D002081 ORTHO05D002088 9.3e-36 154.1 155 54.2
BcaB04g19273 Brassica carinata HOM05D002081 ORTHO05D002088 1.2e-35 153.7 152 53.9
C03p41470 Brassica napus HOM05D002081 ORTHO05D002088 1.2e-35 153.7 152 53.9
BolC3t16428H Brassica oleracea HOM05D002081 ORTHO05D002088 1.2e-35 153.7 152 53.9
Glyma.20G233500 Glycine max HOM05D002081 ORTHO05D002088 1.2e-35 153.7 152 56.6
BraSC132t45514Z Brassica rapa HOM05D002081 ORTHO05D002088 1.6e-35 153.3 156 53.8
ECA246G2650 Erigeron canadensis HOM05D002081 ORTHO05D002088 2.7e-35 152.5 155 58.1
CDE07G0618 Ceratophyllum demersum HOM05D002081 ORTHO05D002088 7.9e-35 151.0 152 57.2
AUR62036539 Chenopodium quinoa HOM05D002081 ORTHO05D002088 1.3e-34 150.2 157 52.2
HPP92_024134 Vanilla planifolia HOM05D002081 ORTHO05D002088 1.3e-34 150.2 153 52.3
EL10Ac4g09344 Beta vulgaris HOM05D002081 ORTHO05D002088 1.8e-34 149.8 152 53.9
MBI17_g13558_MAGBIO Magnolia biondii HOM05D002081 ORTHO05D002088 5.1e-34 148.3 153 54.2
BolC5t34851H Brassica oleracea HOM05D002081 ORTHO05D002088 6.7e-34 147.9 154 53.9
PSO017G1346 Papaver somniferum HOM05D002081 ORTHO05D002088 6.7e-34 147.9 157 53.5
HPP92_006343 Vanilla planifolia HOM05D002081 ORTHO05D002088 6.7e-34 147.9 153 53.6
BcaC05g30016 Brassica carinata HOM05D002081 ORTHO05D002088 3.3e-33 145.6 154 53.2
BraA05t23021Z Brassica rapa HOM05D002081 ORTHO05D002088 3.3e-33 145.6 155 52.9
C05p61910 Brassica napus HOM05D002081 ORTHO05D002088 7.4e-33 144.4 154 53.2
ATR0706G136 Amborella trichopoda HOM05D002081 ORTHO05D002088 9.7e-33 144.1 153 52.3
A05p42310 Brassica napus HOM05D005187 ORTHO05D006321 2.8e-32 142.5 147 50.3
BcaB04g19274 Brassica carinata HOM05D002081 ORTHO05D002088 4.8e-32 141.7 151 53.0
VMungo0720G2426 Vigna mungo HOM05D002081 ORTHO05D002088 4.8e-32 141.7 153 51.6
HanXRQChr14g0448761 Helianthus annuus HOM05D002081 ORTHO05D002088 1.4e-31 140.2 152 50.7
Zm00001eb161830 Zea mays HOM05D002081 ORTHO05D002088 4.1e-31 138.7 155 50.3
Os01g0610500 Oryza sativa ssp. japonica HOM05D002081 ORTHO05D002088 5.3e-31 138.3 155 50.3
SEGI_40211 Sequoiadendron giganteum HOM05D002081 ORTHO05D002088 2.0e-30 136.3 153 51.0
Sabra13G0025200 Salix brachista HOM05D002751 ORTHO05D003005 3.4e-30 135.6 119 58.8
Zm00001eb358000 Zea mays HOM05D002081 ORTHO05D002088 3.4e-30 135.6 152 48.7
ECA238G2130 Erigeron canadensis HOM05D002081 ORTHO05D002088 1.0e-29 134.0 152 50.7
AUR62031135 Chenopodium quinoa HOM05D002081 ORTHO05D002088 2.2e-29 132.9 141 49.6
TAR633G1303 Trochodendron aralioides HOM05D002081 ORTHO05D002088 6.5e-29 131.3 135 53.3
CDE04G1806 Ceratophyllum demersum HOM05D002081 ORTHO05D002088 1.4e-28 130.2 152 51.3
Actinidia13182 Actinidia chinensis HOM05D002081 ORTHO05D002088 4.2e-28 128.6 119 54.6
CSS0001800 Camellia sinensis var. sinensis HOM05D002081 ORTHO05D002088 9.3e-28 127.5 152 48.7
Lsat_1_v5_gn_2_87721 Lactuca sativa HOM05D002081 ORTHO05D002088 1.0e-26 124.0 168 45.2
SMO304G0127 Selaginella moellendorffii HOM05D002081 ORTHO05D002088 1.8e-23 113.2 150 44.7
CiPaw.05G163100 Carya illinoinensis HOM05D002081 ORTHO05D002088 4.1e-23 112.1 62 79.0
Lj5C537T3 Lonicera japonica HOM05D002081 ORTHO05D002088 9.1e-23 110.9 65 83.1
Mapoly0005s0055 Marchantia polymorpha HOM05D002081 ORTHO05D002088 9.1e-23 110.9 153 41.8
Manes.08G121400 Manihot esculenta HOM05D002081 ORTHO05D002088 2.0e-22 109.8 61 82.0
Pp3c1_31750 Physcomitrium patens HOM05D002081 ORTHO05D002088 1.0e-21 107.5 154 41.6
Pp3c1_31760 Physcomitrium patens HOM05D002081 ORTHO05D002088 1.0e-21 107.5 154 41.6
AagrBONN_evm.TU.Sc2ySwM_344.4848 Anthoceros agrestis HOM05D002081 ORTHO05D002088 1.3e-21 107.1 151 41.7
Actinidia24641 Actinidia chinensis HOM05D002751 ORTHO05D003005 1.9e-20 103.2 104 50.0
BcaC05g30139 Brassica carinata HOM05D002081 ORTHO05D002088 5.5e-20 101.7 156 42.3
Ah.06g189280 Amaranthus hybridus HOM05D002081 ORTHO05D002088 3.7e-16 89.0 61 68.9
DCAR_022180 Daucus carota HOM05D002081 ORTHO05D002088 1.1e-15 87.4 63 65.1
Ah.06g189290 Amaranthus hybridus HOM05D002081 ORTHO05D002088 3.1e-15 85.9 60 71.7
Nn4g26240 Nelumbo nucifera HOM05D002081 ORTHO05D002088 3.1e-15 85.9 72 63.9
Actinidia19793 Actinidia chinensis HOM05D002081 ORTHO05D002088 5.3e-15 85.1 62 72.6
SEGI_41301 Sequoiadendron giganteum HOM05D002081 ORTHO05D002088 2.5e-12 76.3 143 35.0
Lj5A537T14 Lonicera japonica HOM05D002081 ORTHO05D002088 2.1e-11 73.2 67 59.7
SEGI_37536 Sequoiadendron giganteum HOM05D002081 ORTHO05D002088 2.7e-11 72.8 154 36.4
CBR_g1001 Chara braunii HOM05D002081 ORTHO05D002088 2.3e-10 69.7 41 70.7
CDE03G0226 Ceratophyllum demersum HOM05D002081 ORTHO05D002088 5.7e-09 65.1 152 31.6
CBR_g3522 Chara braunii HOM05D002081 ORTHO05D002088 2.8e-08 62.8 46 60.9
PSO339G3649 Papaver somniferum HOM05D002081 ORTHO05D002088 1.1e-07 60.8 70 40.0
PSO384G4711 Papaver somniferum HOM05D002081 ORTHO05D002088 1.1e-07 60.8 70 40.0
CDE04G2263 Ceratophyllum demersum HOM05D001947 ORTHO05D002440 1.4e-07 60.5 152 29.6
Nn2g11249 Nelumbo nucifera HOM05D002081 ORTHO05D002088 3.1e-07 59.3 65 41.5
CiPaw.01G292200 Carya illinoinensis HOM05D002081 ORTHO05D002088 9.1e-07 57.8 131 24.4
Dinv16263 Davidia involucrata HOM05D002081 ORTHO05D002088 9.1e-07 57.8 148 27.0
TAR636G1286 Trochodendron aralioides HOM05D002081 ORTHO05D002088 9.1e-07 57.8 112 31.2
MBI14_g09011_MAGBIO Magnolia biondii HOM05D002081 ORTHO05D002088 1.2e-06 57.4 153 28.8
Aqoxy1G00829 Aquilegia oxysepala HOM05D002081 ORTHO05D002088 1.6e-06 57.0 93 34.4
Gohir.A05G347300 Gossypium hirsutum HOM05D002081 ORTHO05D002088 1.6e-06 57.0 57 42.1
CiPaw.02G187300 Carya illinoinensis HOM05D002081 ORTHO05D002088 2.0e-06 56.6 69 34.8
Rhsim03G0136700 Rhododendron simsii HOM05D002081 ORTHO05D002088 2.0e-06 56.6 130 25.4
Haze_17129 Corylus avellana HOM05D002081 ORTHO05D002088 3.5e-06 55.8 128 24.2
Thhalv10017061m.g Eutrema salsugineum HOM05D002081 ORTHO05D002088 3.5e-06 55.8 68 38.2
Manes.10G024700 Manihot esculenta HOM05D002081 ORTHO05D002088 3.5e-06 55.8 152 25.0
BcaB01g03572 Brassica carinata HOM05D002081 ORTHO05D002088 4.5e-06 55.5 69 36.2
Gohir.D04G065000 Gossypium hirsutum HOM05D002081 ORTHO05D002088 4.5e-06 55.5 57 40.4
Gorai.012G073100 Gossypium raimondii HOM05D002081 ORTHO05D002088 4.5e-06 55.5 57 40.4
TAR636G1215 Trochodendron aralioides HOM05D002081 ORTHO05D002088 4.5e-06 55.5 112 31.2
CsaV3_6G001420 Cucumis sativus L. HOM05D002081 ORTHO05D002088 5.9e-06 55.1 92 35.9


User provided reference genes

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