Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08912_v3 Cicer arietinum L. HOM05D004644 ORTHO05D005700 0.0e+00 1154.8 586 100.0
TPR.G32811 Trifolium pratense HOM05D004644 ORTHO05D005700 2.0e-237 825.9 637 71.9
Psat3g041720 Pisum sativum HOM05D004644 ORTHO05D005700 1.8e-222 776.2 626 68.2
Phvul.001G180000 Phaseolus vulgaris HOM05D004644 ORTHO05D005700 9.1e-214 747.3 579 66.7
Medtr7g102280 Medicago truncatula HOM05D004644 ORTHO05D005700 1.8e-206 723.0 620 65.6
Lj1g0025951 Lotus japonicus HOM05D004644 ORTHO05D005700 3.0e-193 679.1 616 59.7
Lalb_Chr20g0112551 Lupinus albus HOM05D004644 ORTHO05D005700 1.4e-185 653.7 539 62.9
VMungo1383G2434 Vigna mungo HOM05D004644 ORTHO05D005700 4.9e-183 645.2 579 59.4
Lj1g0007058 Lotus japonicus HOM05D004644 ORTHO05D005700 2.4e-174 616.3 594 56.4
arahy.Tifrunner.gnm1.ann1.W70S5M Arachis hypogaea HOM05D004644 ORTHO05D005700 1.7e-172 610.1 579 56.8
Glyma.03G184600 Glycine max HOM05D004644 ORTHO05D005700 1.4e-169 600.5 581 57.1
Sabra06G0097000 Salix brachista HOM05D004644 ORTHO05D005700 1.6e-138 497.3 550 50.4
Potri.006G122800 Populus trichocarpa HOM05D004644 ORTHO05D005700 2.8e-138 496.5 533 50.5
MELO3C024470.2 Cucumis melo HOM05D004644 ORTHO05D005700 1.7e-135 487.3 609 45.6
Dinv35798 Davidia involucrata HOM05D004644 ORTHO05D005700 7.1e-134 481.9 592 45.4
Sed0011501 Sechium edule HOM05D004644 ORTHO05D005700 4.6e-133 479.2 591 46.5
MD12G1109200 Malus domestica HOM05D004644 ORTHO05D005700 6.0e-133 478.8 556 47.5
Cfa017634 Carpinus fangiana HOM05D004644 ORTHO05D005700 7.9e-133 478.4 557 49.9
Prupe.7G127800 Prunus persica HOM05D004644 ORTHO05D005700 3.0e-132 476.5 602 45.3
CsaV3_6G039930 Cucumis sativus L. HOM05D004644 ORTHO05D005700 3.9e-132 476.1 609 45.0
Atru.chr8.1780 Acer truncatum HOM05D004644 ORTHO05D005700 1.5e-131 474.2 562 47.7
vmacro07303 Vaccinium macrocarpon HOM05D004644 ORTHO05D005700 4.8e-130 469.2 618 44.2
Gohir.A09G145300 Gossypium hirsutum HOM05D004644 ORTHO05D005700 1.8e-129 467.2 541 48.1
RcHm_v2.0_Chr3g0470481 Rosa chinensis HOM05D004644 ORTHO05D005700 2.4e-129 466.8 550 45.5
FAN09G2255 Fragaria x ananassa HOM05D004644 ORTHO05D005700 3.4e-128 463.0 548 45.6
FAN05G5479 Fragaria x ananassa HOM05D004644 ORTHO05D005700 4.5e-128 462.6 551 45.2
CSS0046520 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 7.6e-128 461.8 543 46.4
FvH4_6g16560 Fragaria vesca HOM05D004644 ORTHO05D005700 1.7e-127 460.7 551 45.6
FAN05G3668 Fragaria x ananassa HOM05D004644 ORTHO05D005700 2.2e-127 460.3 551 45.0
QL07p043006 Quercus lobata HOM05D004644 ORTHO05D005700 2.2e-127 460.3 550 48.2
Duzib093G1101 Durio zibethinus HOM05D004644 ORTHO05D005700 2.9e-127 459.9 574 46.5
TWI53G0078 Tripterygium wilfordii HOM05D004644 ORTHO05D005700 4.9e-127 459.1 568 45.8
ClCG04G009350 Citrullus lanatus HOM05D004644 ORTHO05D005700 1.4e-126 457.6 612 44.4
Actinidia28913 Actinidia chinensis HOM05D004644 ORTHO05D005700 1.6e-125 454.1 582 44.3
COL.COLO4_26937 Corchorus olitorius HOM05D004644 ORTHO05D005700 9.6e-123 444.9 579 44.2
Gorai.006G162300 Gossypium raimondii HOM05D004644 ORTHO05D005700 9.6e-123 444.9 548 46.4
Gohir.D09G141400 Gossypium hirsutum HOM05D004644 ORTHO05D005700 2.1e-122 443.7 552 46.2
TAR633G1934 Trochodendron aralioides HOM05D004644 ORTHO05D005700 6.2e-122 442.2 523 45.5
GSVIVG01033660001 Vitis vinifera HOM05D004644 ORTHO05D005700 5.3e-121 439.1 464 50.4
DCAR_009308 Daucus carota HOM05D004644 ORTHO05D005700 9.0e-121 438.3 520 46.7
Oeu045234.3 Olea europaea HOM05D004644 ORTHO05D005700 6.5e-119 432.2 535 45.2
FAN02G4433 Fragaria x ananassa HOM05D004644 ORTHO05D005700 4.2e-118 429.5 593 42.2
Eucgr.A01659 Eucalyptus grandis HOM05D004644 ORTHO05D005700 5.5e-118 429.1 571 44.5
MSTRG.5768 Avicennia marina HOM05D004644 ORTHO05D005700 1.3e-116 424.5 571 42.6
Lj2C119G5 Lonicera japonica HOM05D004644 ORTHO05D005700 2.5e-115 420.2 572 44.6
Rhsim03G0090100 Rhododendron simsii HOM05D004644 ORTHO05D005700 4.3e-115 419.5 568 42.6
PGR004G1497 Punica granatum HOM05D004644 ORTHO05D005700 3.1e-113 413.3 559 43.3
EL10Ac7g16657 Beta vulgaris HOM05D004644 ORTHO05D005700 7.6e-112 408.7 549 42.6
FAN14G1031 Fragaria x ananassa HOM05D004644 ORTHO05D005700 1.4e-110 404.4 514 44.0
SGA_v2.0_scaffold75G24833 Striga asiatica HOM05D004644 ORTHO05D005700 1.6e-109 401.0 557 41.1
Sopen09g003150 Solanum pennellii HOM05D004644 ORTHO05D005700 1.0e-108 398.3 564 43.3
Migut.J00643 Erythranthe guttata HOM05D004644 ORTHO05D005700 1.3e-108 397.9 462 48.3
AUR62026918 Chenopodium quinoa HOM05D004644 ORTHO05D005700 2.2e-106 390.6 576 39.8
ECA238G2777 Erigeron canadensis HOM05D004644 ORTHO05D005700 1.4e-105 387.9 537 41.9
Aqoxy2G01714 Aquilegia oxysepala HOM05D004644 ORTHO05D005700 2.6e-104 383.6 466 45.5
Solyc09g008330.3 Solanum lycopersicum HOM05D004644 ORTHO05D005700 3.4e-104 383.3 552 42.8
CARHR209890 Cardamine hirsuta HOM05D004644 ORTHO05D005700 1.3e-103 381.3 592 40.5
AUR62042062 Chenopodium quinoa HOM05D004644 ORTHO05D005700 2.2e-103 380.6 575 39.0
HanXRQChr14g0432961 Helianthus annuus HOM05D004644 ORTHO05D005700 2.2e-103 380.6 526 42.4
Carub.0006s0226 Capsella rubella HOM05D004644 ORTHO05D005700 1.1e-102 378.3 570 40.5
Sc02g0001570 Simmondsia chinensis HOM05D004644 ORTHO05D005700 5.5e-102 375.9 540 39.6
BolC2t06098H Brassica oleracea HOM05D004644 ORTHO05D005700 3.6e-101 373.2 533 41.3
Cpa.g.sc102.18 Carica papaya HOM05D004644 ORTHO05D005700 1.0e-100 371.7 434 47.2
BraA02t04761Z Brassica rapa HOM05D004644 ORTHO05D005700 1.8e-100 370.9 532 41.0
PSO339G1979 Papaver somniferum HOM05D004644 ORTHO05D005700 3.9e-100 369.8 516 40.3
THA.LOC104816355 Tarenaya hassleriana HOM05D004644 ORTHO05D005700 8.8e-100 368.6 551 40.1
AL6G12810 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 1.4e-97 361.3 561 39.4
MBI18_g00904_MAGBIO Magnolia biondii HOM05D004644 ORTHO05D005700 2.4e-97 360.5 481 42.0
BcaB05g21841 Brassica carinata HOM05D004644 ORTHO05D005700 3.1e-97 360.1 563 38.9
AT5G03450 Arabidopsis thaliana HOM05D004644 ORTHO05D005700 4.1e-97 359.8 571 39.4
Nitab4.5_0000578g0020 Nicotiana tabacum HOM05D004644 ORTHO05D005700 4.1e-97 359.8 531 43.5
Lsat_1_v5_gn_2_30721 Lactuca sativa HOM05D004644 ORTHO05D005700 9.1e-97 358.6 553 38.2
Sp6g39290 Schrenkiella parvula HOM05D004644 ORTHO05D005700 2.6e-96 357.1 574 38.3
Aa31LG1G21710 Aethionema arabicum HOM05D004644 ORTHO05D005700 1.6e-93 347.8 462 43.1
C02p01080 Brassica napus HOM05D004644 ORTHO05D005700 3.9e-92 343.2 557 38.6
QL08p054123 Quercus lobata HOM05D004644 ORTHO05D005700 5.7e-91 339.3 551 38.3
PGSC0003DMG401003893 Solanum tuberosum HOM05D004644 ORTHO05D005700 1.7e-90 337.8 355 50.7
PSO801G0701 Papaver somniferum HOM05D004644 ORTHO05D005700 8.2e-90 335.5 337 49.9
Potri.010G228000 Populus trichocarpa HOM05D004644 ORTHO05D005700 1.4e-89 334.7 570 35.6
Manes.07G133120 Manihot esculenta HOM05D004644 ORTHO05D005700 1.2e-88 331.6 466 40.1
Cc06_g04370 Coffea canephora HOM05D004644 ORTHO05D005700 2.6e-88 330.5 402 45.0
Thhalv10013047m.g Eutrema salsugineum HOM05D004644 ORTHO05D005700 1.3e-87 328.2 575 38.6
Haze_20518 Corylus avellana HOM05D004644 ORTHO05D005700 2.5e-86 323.9 405 47.2
Manes.09G065000 Manihot esculenta HOM05D004644 ORTHO05D005700 1.2e-85 321.6 452 43.6
SGA_v2.0_scaffold40G15487 Striga asiatica HOM05D004644 ORTHO05D005700 2.2e-82 310.8 581 36.5
Peaxi162Scf00722g00210 Petunia axillaris HOM05D004644 ORTHO05D005700 5.3e-81 306.2 459 41.6
CiPaw.09G171100 Carya illinoinensis HOM05D004644 ORTHO05D005700 4.7e-77 293.1 251 58.2
CARHR209550 Cardamine hirsuta HOM05D004644 ORTHO05D005700 2.4e-73 280.8 550 34.5
Nitab4.5_0004476g0040 Nicotiana tabacum HOM05D004644 ORTHO05D005700 3.1e-73 280.4 427 41.9
Prupe.2G207900 Prunus persica HOM05D004644 ORTHO05D005700 5.4e-73 279.6 571 32.7
AL6G13290 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 7.0e-73 279.3 445 38.2
Thecc.05G069300 Theobroma cacao HOM05D004644 ORTHO05D005700 1.7e-71 274.6 361 44.9
Os10g0545600 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 4.7e-69 266.5 567 35.1
Zm00001eb000650 Zea mays HOM05D004644 ORTHO05D005700 2.0e-67 261.2 497 35.2
Zm00001eb393970 Zea mays HOM05D004644 ORTHO05D005700 5.7e-67 259.6 510 33.5
Zm00001eb393990 Zea mays HOM05D004644 ORTHO05D005700 1.7e-66 258.1 502 35.1
unitig_8.g4114 Utricularia gibba HOM05D004644 ORTHO05D005700 6.3e-66 256.1 532 32.5
MD01G1102300 Malus domestica HOM05D004644 ORTHO05D005700 1.6e-64 251.5 311 45.7
ATR0763G089 Amborella trichopoda HOM05D004644 ORTHO05D005700 6.6e-63 246.1 312 42.3
Actinidia26658 Actinidia chinensis HOM05D004644 ORTHO05D005700 2.6e-59 234.2 242 48.8
CDE02G0420 Ceratophyllum demersum HOM05D004644 ORTHO05D005700 3.4e-59 233.8 333 39.3
CSS0030902 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 4.3e-54 216.9 251 44.6
arahy.Tifrunner.gnm1.ann1.K7JVCN Arachis hypogaea HOM05D004644 ORTHO05D005700 5.0e-47 193.4 345 39.7
Mapoly0033s0098 Marchantia polymorpha HOM05D004644 ORTHO05D005700 2.8e-45 187.6 427 31.4
Pp3c22_3930 Physcomitrium patens HOM05D004644 ORTHO05D005700 1.4e-44 185.3 395 33.7
Haze_20519 Corylus avellana HOM05D004644 ORTHO05D005700 2.3e-39 167.9 205 47.8
CBR_g31861 Chara braunii HOM05D004644 ORTHO05D005700 4.9e-34 150.2 266 35.3
Glyma.19G185000 Glycine max HOM05D004644 ORTHO05D005700 4.9e-34 150.2 101 69.3
CSS0001913 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 1.2e-32 145.6 116 56.9
Nn2g13824 Nelumbo nucifera HOM05D004644 ORTHO05D005700 1.2e-29 135.6 151 49.7
Atru.chr8.1779 Acer truncatum HOM05D004644 ORTHO05D005700 6.9e-20 103.2 138 47.1
Atru.chr8.1778 Acer truncatum HOM05D004644 ORTHO05D005700 4.9e-18 97.1 199 34.7
Cpa.g.sc102.17 Carica papaya HOM05D004644 ORTHO05D005700 1.4e-17 95.5 142 43.7
PGR004G0361 Punica granatum HOM05D004644 ORTHO05D005700 3.2e-17 94.4 83 49.4
PGR004G0952 Punica granatum HOM05D004644 ORTHO05D005700 1.6e-16 92.0 85 47.1
Lj3C987G12 Lonicera japonica HOM05D004644 ORTHO05D005700 8.7e-15 86.3 145 37.9
Glyma.18G219501 Glycine max HOM05D000076 ORTHO05D005700 2.1e-13 81.6 63 66.7
Glyma.07G162100 Glycine max HOM05D003568 ORTHO05D004104 8.1e-13 79.7 74 58.1
Prupe.7G127600 Prunus persica HOM05D004644 ORTHO05D005700 4.0e-12 77.4 124 40.3
Sabra10G0175900 Salix brachista HOM05D004644 ORTHO05D005700 5.3e-12 77.0 104 42.3
MCO15G141 Micromonas commoda HOM05D004644 ORTHO05D005700 4.5e-11 73.9 242 31.0
Lsat_1_v5_gn_6_24500 Lactuca sativa HOM05D004644 ORTHO05D005700 1.3e-10 72.4 116 37.1
Sc02g0001560 Simmondsia chinensis HOM05D004644 ORTHO05D005700 1.7e-10 72.0 106 37.7
PGSC0003DMG402003893 Solanum tuberosum HOM05D004644 ORTHO05D005700 1.7e-10 72.0 180 29.4
AT5G03750 Arabidopsis thaliana HOM05D004644 ORTHO05D005700 2.9e-10 71.2 47 68.1
ECA233G2118 Erigeron canadensis HOM05D004644 ORTHO05D005700 4.9e-10 70.5 116 38.8
SEGI_17091 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 1.4e-09 68.9 202 27.2
HanXRQChr13g0400851 Helianthus annuus HOM05D004644 ORTHO05D005700 9.3e-09 66.2 142 34.5
Lsat_1_v5_gn_6_24480 Lactuca sativa HOM05D004644 ORTHO05D005700 3.5e-08 64.3 94 37.2
Cc06_g04380 Coffea canephora HOM05D004644 ORTHO05D005700 1.0e-07 62.8 113 33.6
arahy.Tifrunner.gnm1.ann1.K7C7WR Arachis hypogaea HOM05D000552 ORTHO05D005700 2.3e-07 61.6 48 66.7
COL.COLO4_26936 Corchorus olitorius HOM05D004644 ORTHO05D005700 8.7e-07 59.7 96 42.7
Lj3C988T3 Lonicera japonica HOM05D004644 ORTHO05D005700 8.7e-07 59.7 66 45.5
MD01G1102200 Malus domestica HOM05D004644 ORTHO05D005700 9.6e-06 56.2 157 28.7


User provided reference genes

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