Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08759_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 2.3e-288 995.0 543 100.0
Ca_30219_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 2.3e-288 995.0 543 100.0
Psat3g052160 Pisum sativum HOM05D003743 ORTHO05D004311 4.2e-221 771.5 543 80.8
TPR.G30857 Trifolium pratense HOM05D003743 ORTHO05D004311 7.3e-218 760.8 522 81.0
Glyma.07G194200 Glycine max HOM05D003743 ORTHO05D004311 2.1e-217 759.2 544 79.0
Ca_25733_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 1.6e-212 743.0 544 77.9
Glyma.13G182500 Glycine max HOM05D003743 ORTHO05D004311 1.6e-212 743.0 544 78.5
Phvul.002G226300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 7.4e-210 734.2 544 77.9
Psat7g112160 Pisum sativum HOM05D003743 ORTHO05D004311 2.1e-209 732.6 544 75.9
VMungo0251G3484 Vigna mungo HOM05D003743 ORTHO05D004311 2.4e-208 729.2 544 77.4
Lj4g0023106 Lotus japonicus HOM05D003743 ORTHO05D004311 5.3e-208 728.0 544 76.7
Medtr4g089070 Medicago truncatula HOM05D003743 ORTHO05D004311 1.7e-206 723.0 544 75.6
TPR.G12063 Trifolium pratense HOM05D003743 ORTHO05D004311 1.2e-204 716.8 544 75.2
Medtr7g099060 Medicago truncatula HOM05D003743 ORTHO05D004311 7.9e-204 714.1 543 76.1
CiPaw.10G046600 Carya illinoinensis HOM05D003743 ORTHO05D004311 2.1e-201 706.1 546 74.4
arahy.Tifrunner.gnm1.ann1.I4CLDN Arachis hypogaea HOM05D003743 ORTHO05D004311 2.8e-201 705.7 544 73.0
Lalb_Chr05g0218341 Lupinus albus HOM05D003743 ORTHO05D004311 1.5e-199 699.9 544 75.0
QL05p039342 Quercus lobata HOM05D003743 ORTHO05D004311 1.4e-197 693.3 546 72.3
QL10p057179 Quercus lobata HOM05D003743 ORTHO05D004311 1.4e-197 693.3 546 72.3
Cpa.g.sc27.76 Carica papaya HOM05D003743 ORTHO05D004311 4.2e-197 691.8 552 71.7
Haze_06507 Corylus avellana HOM05D003743 ORTHO05D004311 7.9e-196 687.6 547 73.3
Glyma.03G168800 Glycine max HOM05D003743 ORTHO05D004311 7.9e-196 687.6 543 71.6
Thecc.06G191600 Theobroma cacao HOM05D003743 ORTHO05D004311 8.7e-195 684.1 548 71.9
MELO3C017564.2 Cucumis melo HOM05D003743 ORTHO05D004311 1.5e-194 683.3 547 69.7
CsaV3_4G005020 Cucumis sativus L. HOM05D003743 ORTHO05D004311 7.4e-194 681.0 549 69.0
Prupe.3G050300 Prunus persica HOM05D003743 ORTHO05D004311 3.7e-193 678.7 547 70.7
MD10G1061800 Malus domestica HOM05D003743 ORTHO05D004311 1.8e-192 676.4 548 71.4
Gohir.D10G024500 Gossypium hirsutum HOM05D003743 ORTHO05D004311 1.2e-191 673.7 548 71.4
Duzib160G0164 Durio zibethinus HOM05D003743 ORTHO05D004311 5.9e-191 671.4 548 70.8
Gorai.011G025800 Gossypium raimondii HOM05D003743 ORTHO05D004311 7.7e-191 671.0 547 70.9
Gohir.A10G023800 Gossypium hirsutum HOM05D003743 ORTHO05D004311 1.7e-190 669.8 548 71.0
Lj1g0019037 Lotus japonicus HOM05D003743 ORTHO05D004311 1.4e-189 666.8 545 71.2
Phvul.001G167200 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 1.4e-189 666.8 543 70.2
COL.COLO4_31510 Corchorus olitorius HOM05D003743 ORTHO05D004311 1.6e-188 663.3 547 70.6
Eucgr.E03353 Eucalyptus grandis HOM05D003743 ORTHO05D004311 2.1e-188 662.9 548 70.3
Dinv07531 Davidia involucrata HOM05D003743 ORTHO05D004311 2.5e-186 656.0 548 68.2
Duzib235G1026 Durio zibethinus HOM05D003743 ORTHO05D004311 1.3e-185 653.7 548 69.3
Manes.16G024900 Manihot esculenta HOM05D003743 ORTHO05D004311 1.3e-185 653.7 548 69.9
Glyma.19G170200 Glycine max HOM05D003743 ORTHO05D004311 4.8e-185 651.7 543 69.1
CANSAT35G0257 Cannabis sativa HOM05D003743 ORTHO05D004311 1.1e-184 650.6 554 69.3
Lalb_Chr16g0383591 Lupinus albus HOM05D003743 ORTHO05D004311 1.1e-184 650.6 543 69.8
Sed0012938 Sechium edule HOM05D003743 ORTHO05D004311 6.9e-184 647.9 547 69.3
Sabra04G0024300 Salix brachista HOM05D003743 ORTHO05D004311 2.9e-182 642.5 549 68.5
PGR042G1300 Punica granatum HOM05D003743 ORTHO05D004311 3.8e-182 642.1 557 65.2
THA.LOC104819165 Tarenaya hassleriana HOM05D003743 ORTHO05D004311 8.5e-182 641.0 547 66.5
Potri.004G039500 Populus trichocarpa HOM05D003743 ORTHO05D004311 2.5e-181 639.4 549 68.5
TWI23G0181 Tripterygium wilfordii HOM05D003743 ORTHO05D004311 9.4e-181 637.5 548 65.5
Potri.011G047900 Populus trichocarpa HOM05D003743 ORTHO05D004311 4.7e-180 635.2 550 67.8
Ciclev10028000m.g Citrus clementina HOM05D003743 ORTHO05D004311 1.0e-179 634.0 545 67.9
TAR627G0572 Trochodendron aralioides HOM05D003743 ORTHO05D004311 1.0e-179 634.0 552 66.5
VMungo1383G3375 Vigna mungo HOM05D003743 ORTHO05D004311 1.0e-179 634.0 540 67.4
Thhalv10023338m.g Eutrema salsugineum HOM05D003743 ORTHO05D004311 3.0e-179 632.5 545 65.3
FAN14G3620 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.5e-178 630.2 548 67.7
RcHm_v2.0_Chr5g0007801 Rosa chinensis HOM05D003743 ORTHO05D004311 3.3e-178 629.0 548 68.1
Aa31LG2G9550 Aethionema arabicum HOM05D003743 ORTHO05D004311 4.4e-178 628.6 547 66.9
FAN16G2290 Fragaria x ananassa HOM05D003743 ORTHO05D004311 9.7e-178 627.5 548 67.5
Atru.chr7.2377 Acer truncatum HOM05D003743 ORTHO05D004311 2.2e-177 626.3 548 67.3
FAN03G0627 Fragaria x ananassa HOM05D003743 ORTHO05D004311 4.8e-177 625.2 548 67.2
FAN21G0113 Fragaria x ananassa HOM05D003743 ORTHO05D004311 4.8e-177 625.2 548 67.9
AL2G15400 Arabidopsis lyrata HOM05D003743 ORTHO05D004311 6.3e-177 624.8 545 66.2
TAR629G2996 Trochodendron aralioides HOM05D003743 ORTHO05D004311 6.3e-177 624.8 553 67.1
BcaC06g31829 Brassica carinata HOM05D003743 ORTHO05D004311 8.2e-177 624.4 547 63.6
Carub.0002s0416 Capsella rubella HOM05D003743 ORTHO05D004311 1.4e-176 623.6 545 65.9
FvH4_3g04783 Fragaria vesca HOM05D003743 ORTHO05D004311 1.8e-176 623.2 548 67.2
Lsat_1_v5_gn_2_40361 Lactuca sativa HOM05D003743 ORTHO05D004311 3.1e-176 622.5 544 64.5
AT1G61040 Arabidopsis thaliana HOM05D003743 ORTHO05D004311 4.1e-176 622.1 545 66.2
C01p37700 Brassica napus HOM05D003743 ORTHO05D004311 7.0e-176 621.3 545 63.9
BcaC02g10594 Brassica carinata HOM05D003743 ORTHO05D004311 9.1e-176 620.9 546 64.1
C04p25600 Brassica napus HOM05D003743 ORTHO05D004311 9.1e-176 620.9 546 64.1
Lj8P171T25 Lonicera japonica HOM05D003743 ORTHO05D004311 9.1e-176 620.9 546 66.1
CSS0028072 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 2.0e-175 619.8 523 66.9
CARHR052180 Cardamine hirsuta HOM05D003743 ORTHO05D004311 1.7e-174 616.7 545 65.1
Rhsim07G0025200 Rhododendron simsii HOM05D003743 ORTHO05D004311 2.9e-174 615.9 546 66.1
RhsimUnG0044100 Rhododendron simsii HOM05D003743 ORTHO05D004311 2.9e-174 615.9 546 66.1
Hma1.2p1_0126F.1_g059170 Hydrangea macrophylla HOM05D003743 ORTHO05D004311 1.1e-173 614.0 548 65.9
BcaC09g49339 Brassica carinata HOM05D003743 ORTHO05D004311 1.9e-173 613.2 543 63.5
Nitab4.5_0003668g0110 Nicotiana tabacum HOM05D003743 ORTHO05D004311 1.9e-173 613.2 549 63.8
Sabra11G0033300 Salix brachista HOM05D003743 ORTHO05D004311 5.5e-173 611.7 547 65.6
A01p29850 Brassica napus HOM05D003743 ORTHO05D004311 2.1e-172 609.8 548 63.5
BraA01t03113Z Brassica rapa HOM05D003743 ORTHO05D004311 2.1e-172 609.8 548 63.5
HanXRQChr10g0285841 Helianthus annuus HOM05D003743 ORTHO05D004311 6.1e-172 608.2 548 63.3
QL03p016879 Quercus lobata HOM05D003743 ORTHO05D004311 1.0e-171 607.4 546 66.3
Sp2g03480 Schrenkiella parvula HOM05D003743 ORTHO05D004311 2.6e-170 602.8 546 62.3
Cc02_g12930 Coffea canephora HOM05D003743 ORTHO05D004311 4.4e-170 602.1 548 62.2
Nn1g07800 Nelumbo nucifera HOM05D003743 ORTHO05D004311 7.4e-170 601.3 552 63.2
PSO210G5871 Papaver somniferum HOM05D003743 ORTHO05D004311 7.4e-170 601.3 547 65.3
PSO170G2796 Papaver somniferum HOM05D003743 ORTHO05D004311 2.8e-169 599.4 547 64.7
Nitab4.5_0003347g0010 Nicotiana tabacum HOM05D003743 ORTHO05D004311 4.8e-169 598.6 549 62.7
SalBow8G3648 Salvia bowleyana HOM05D003743 ORTHO05D004311 1.1e-168 597.4 535 63.6
Prupe.6G309900 Prunus persica HOM05D003743 ORTHO05D004311 4.1e-168 595.5 546 62.6
BcaB04g20309 Brassica carinata HOM05D003743 ORTHO05D004311 9.1e-168 594.3 553 61.1
Sc05g0007850 Simmondsia chinensis HOM05D003743 ORTHO05D004311 2.0e-167 593.2 543 64.5
DCAR_004097 Daucus carota HOM05D003743 ORTHO05D004311 2.6e-167 592.8 550 62.5
Peaxi162Scf00379g00092 Petunia axillaris HOM05D003743 ORTHO05D004311 2.2e-166 589.7 547 61.4
Oeu050830.1 Olea europaea HOM05D003743 ORTHO05D004311 3.8e-166 589.0 544 61.9
CAN.G1627.16 Capsicum annuum HOM05D003743 ORTHO05D004311 1.5e-165 587.0 550 62.5
DCAR_008049 Daucus carota HOM05D003743 ORTHO05D004311 2.1e-164 583.2 548 63.7
PGSC0003DMG400022434 Solanum tuberosum HOM05D003743 ORTHO05D004311 1.2e-162 577.4 548 60.6
MBI04_g36401_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 9.8e-162 574.3 546 63.2
Sopen02g023440 Solanum pennellii HOM05D003743 ORTHO05D004311 2.8e-161 572.8 546 60.1
Solyc02g078580.1 Solanum lycopersicum HOM05D003743 ORTHO05D004311 3.7e-161 572.4 546 59.9
FvH4_6g07870 Fragaria vesca HOM05D003743 ORTHO05D004311 8.3e-161 571.2 552 59.1
FAN05G4405 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.4e-160 570.5 552 58.5
FAN14G1138 Fragaria x ananassa HOM05D003743 ORTHO05D004311 9.1e-160 567.8 552 58.7
CSS0027200 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 3.5e-159 565.8 545 60.2
Migut.M01180 Erythranthe guttata HOM05D003743 ORTHO05D004311 3.5e-159 565.8 547 59.8
RcHm_v2.0_Chr3g0457571 Rosa chinensis HOM05D003743 ORTHO05D004311 4.5e-159 565.5 548 58.9
FAN09G3903 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.0e-158 564.3 552 58.2
CANSAT54G1490 Cannabis sativa HOM05D003743 ORTHO05D004311 1.7e-158 563.5 551 59.3
HPP92_024423 Vanilla planifolia HOM05D003743 ORTHO05D004311 2.3e-155 553.1 558 58.2
FAN25G1603 Fragaria x ananassa HOM05D003743 ORTHO05D004311 6.8e-155 551.6 547 62.3
ECA240G0220 Erigeron canadensis HOM05D003743 ORTHO05D004311 1.5e-154 550.4 544 59.4
SGA_v2.0_scaffold100G29640 Striga asiatica HOM05D003743 ORTHO05D004311 1.1e-152 544.3 543 58.0
CDE02G2043 Ceratophyllum demersum HOM05D003743 ORTHO05D004311 1.6e-151 540.4 552 59.6
AUR62014784 Chenopodium quinoa HOM05D003743 ORTHO05D004311 2.0e-151 540.0 535 60.6
DCAR_004099 Daucus carota HOM05D003743 ORTHO05D004311 2.7e-151 539.7 549 60.1
Ah.09g235750 Amaranthus hybridus HOM05D003743 ORTHO05D004311 4.5e-151 538.9 544 60.1
SHI01836 Sapria himalayana HOM05D003743 ORTHO05D004311 6.6e-150 535.0 547 56.1
EL10Ac8g20336 Beta vulgaris HOM05D003743 ORTHO05D004311 7.2e-149 531.6 545 59.8
FAN02G2028 Fragaria x ananassa HOM05D003743 ORTHO05D004311 7.2e-149 531.6 552 55.4
Aqoxy1G03805 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 1.2e-148 530.8 549 58.3
Ah.04g152550 Amaranthus hybridus HOM05D003743 ORTHO05D004311 2.8e-148 529.6 545 56.3
unitig_748.g8020 Utricularia gibba HOM05D003743 ORTHO05D004311 3.6e-148 529.3 547 56.3
AUR62016972 Chenopodium quinoa HOM05D003743 ORTHO05D004311 8.0e-148 528.1 548 59.7
ATR0763G146 Amborella trichopoda HOM05D003743 ORTHO05D004311 5.2e-147 525.4 546 57.3
MD04G1191400 Malus domestica HOM05D003743 ORTHO05D004311 2.0e-146 523.5 544 56.8
VMungo1383G2741 Vigna mungo HOM05D003743 ORTHO05D004311 1.3e-145 520.8 548 55.3
Phvul.001G224300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 1.1e-144 517.7 548 56.0
Lalb_Chr04g0260391 Lupinus albus HOM05D003743 ORTHO05D004311 3.2e-144 516.2 550 53.8
SEGI_13209 Sequoiadendron giganteum HOM05D003743 ORTHO05D004311 3.9e-142 509.2 546 55.7
Ca_20186_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 3.6e-140 502.7 553 54.8
MBI16_g34925_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 8.0e-140 501.5 547 58.5
Psat7g225840 Pisum sativum HOM05D003743 ORTHO05D004311 1.7e-137 493.8 553 54.4
TPR.G34103 Trifolium pratense HOM05D003743 ORTHO05D004311 1.7e-137 493.8 548 53.6
Aqoxy3G03252 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 2.2e-137 493.4 549 55.0
Sc06g0009130 Simmondsia chinensis HOM05D003743 ORTHO05D004311 1.6e-135 487.3 520 59.4
AUR62020979 Chenopodium quinoa HOM05D003743 ORTHO05D004311 2.0e-135 486.9 538 55.2
EL10Ac8g18529 Beta vulgaris HOM05D003743 ORTHO05D004311 3.5e-135 486.1 548 55.7
Os12g0535900 Oryza sativa ssp. japonica HOM05D003743 ORTHO05D004311 1.5e-133 480.7 550 52.5
Glyma.03G230500 Glycine max HOM05D003743 ORTHO05D004311 1.6e-132 477.2 552 52.5
Zm00001eb410600 Zea mays HOM05D003743 ORTHO05D004311 3.1e-131 473.0 549 50.8
Lj1g0026238 Lotus japonicus HOM05D003743 ORTHO05D004311 4.0e-131 472.6 545 51.6
Medtr4g032885 Medicago truncatula HOM05D003743 ORTHO05D004311 5.2e-131 472.2 552 52.4
Zm00001eb137720 Zea mays HOM05D003743 ORTHO05D004311 8.9e-131 471.5 558 51.1
arahy.Tifrunner.gnm1.ann1.58ANB0 Arachis hypogaea HOM05D003743 ORTHO05D004311 3.3e-125 453.0 535 52.1
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 4.7e-124 449.1 542 51.8
MBI16_g34928_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 3.6e-116 422.9 533 54.0
Pp3c12_17420 Physcomitrium patens HOM05D003743 ORTHO05D004311 2.4e-112 410.2 554 47.5
AagrBONN_evm.TU.Sc2ySwM_368.1522 Anthoceros agrestis HOM05D003743 ORTHO05D004311 2.5e-109 400.2 551 46.1
Mapoly0001s0024 Marchantia polymorpha HOM05D003743 ORTHO05D004311 1.5e-106 391.0 548 45.6
Glyma.13G060000 Glycine max HOM05D003743 ORTHO05D004311 3.1e-99 366.7 285 76.8
BolC1t03734H Brassica oleracea HOM05D003743 ORTHO05D004311 9.9e-98 361.7 311 65.3
Actinidia05611 Actinidia chinensis HOM05D003743 ORTHO05D004311 2.1e-92 344.0 289 68.2
SMO118G0429 Selaginella moellendorffii HOM05D003743 ORTHO05D004311 9.6e-85 318.5 554 41.7
FvH4_6g03621 Fragaria vesca HOM05D003743 ORTHO05D004311 1.7e-81 307.8 289 65.7
Lj1P877T22 Lonicera japonica HOM05D003743 ORTHO05D004311 1.9e-80 304.3 314 53.8
A03p68920 Brassica napus HOM05D003743 ORTHO05D004311 1.2e-79 301.6 544 41.5
BraSC39t46172Z Brassica rapa HOM05D003743 ORTHO05D004311 1.2e-79 301.6 544 41.5
Mapoly0009s0176 Marchantia polymorpha HOM05D003743 ORTHO05D004311 1.0e-78 298.5 553 40.5
GSVIVG01006453001 Vitis vinifera HOM05D003743 ORTHO05D004311 5.5e-72 276.2 233 67.0
ECA248G2279 Erigeron canadensis HOM05D003743 ORTHO05D004311 1.8e-70 271.2 246 61.4
CBR_g30024 Chara braunii HOM05D003743 ORTHO05D004311 3.1e-59 233.8 388 38.9
Oeu016117.1 Olea europaea HOM05D003743 ORTHO05D004311 2.5e-56 224.2 544 37.3
Zm00001eb087640 Zea mays HOM05D003743 ORTHO05D004311 6.5e-49 199.5 272 42.6
Lalb_Chr20g0113451 Lupinus albus HOM05D003743 ORTHO05D004311 3.7e-36 157.1 112 68.8
EL10Ac4g08952 Beta vulgaris HOM05D003743 ORTHO05D004311 5.9e-26 123.2 156 52.6
FvH4_6g03622 Fragaria vesca HOM05D003743 ORTHO05D004311 1.0e-25 122.5 77 76.6
Aqoxy3G03215 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 7.3e-24 116.3 106 55.7
ECA246G3327 Erigeron canadensis HOM05D001482 ORTHO05D001499 2.6e-21 107.8 81 65.4
Cre03.g196450 Chlamydomonas reinhardtii HOM05D003743 ORTHO05D004311 5.4e-19 100.1 413 26.4
SGA_v2.0_scaffold49G18283 Striga asiatica HOM05D003743 ORTHO05D004311 9.2e-19 99.4 135 39.3
Aqoxy3G03214 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 2.7e-18 97.8 78 70.5
Rhsim02G0125200 Rhododendron simsii HOM05D003743 ORTHO05D004311 7.8e-18 96.3 61 72.1
Aqoxy3G03213 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 4.3e-16 90.5 74 58.1
EL10Ac5g12107 Beta vulgaris HOM05D003743 ORTHO05D004311 1.3e-12 79.0 60 66.7
PRCOL_00005809 Prasinoderma coloniale HOM05D003743 ORTHO05D004311 1.3e-12 79.0 311 28.6
MBI04_g35990_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 6.6e-09 66.6 97 48.5
arahy.Tifrunner.gnm1.ann1.8T1JJH Arachis hypogaea HOM05D003743 ORTHO05D004311 1.5e-08 65.5 133 45.9
Cfa025708 Carpinus fangiana HOM05D003743 ORTHO05D004311 9.5e-08 62.8 304 23.4
SEGI_28495 Sequoiadendron giganteum HOM05D003743 ORTHO05D004311 3.6e-07 60.8 82 53.7


User provided reference genes

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