Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08457_v3 Cicer arietinum L. HOM05D005933 ORTHO05D007366 8.8e-265 916.4 459 100.0
Medtr7g091500 Medicago truncatula HOM05D005933 ORTHO05D007366 2.0e-240 835.5 459 90.6
Psat3g072720 Pisum sativum HOM05D005933 ORTHO05D007366 2.8e-234 815.1 444 91.2
Lj1g0013042 Lotus japonicus HOM05D005933 ORTHO05D007366 2.8e-226 788.5 459 85.0
Phvul.001G132100 Phaseolus vulgaris HOM05D005933 ORTHO05D007366 1.9e-219 765.8 458 84.1
Glyma.03G136900 Glycine max HOM05D005933 ORTHO05D007366 4.3e-219 764.6 459 82.8
Lalb_Chr25g0287121 Lupinus albus HOM05D005933 ORTHO05D007366 4.6e-213 744.6 456 82.5
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea HOM05D005933 ORTHO05D007366 3.9e-212 741.5 460 79.3
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea HOM05D005933 ORTHO05D007366 8.7e-212 740.3 460 79.3
TPR.G854 Trifolium pratense HOM05D005933 ORTHO05D007366 4.0e-209 731.5 399 91.7
VMungo1383G3081 Vigna mungo HOM05D005933 ORTHO05D007366 1.1e-203 713.4 559 67.8
Ciclev10004945m.g Citrus clementina HOM05D005933 ORTHO05D007366 3.6e-173 612.1 459 65.6
FvH4_6g23820 Fragaria vesca HOM05D005933 ORTHO05D007366 1.4e-169 600.1 460 66.1
FAN02G2268 Fragaria x ananassa HOM05D005933 ORTHO05D007366 1.8e-169 599.7 463 65.9
CiPaw.08G166600 Carya illinoinensis HOM05D005933 ORTHO05D007366 4.1e-169 598.6 464 65.7
RcHm_v2.0_Chr3g0482381 Rosa chinensis HOM05D005933 ORTHO05D007366 1.7e-167 593.2 471 64.3
FAN05G5216 Fragaria x ananassa HOM05D005933 ORTHO05D007366 1.5e-166 590.1 463 65.7
Haze_19854 Corylus avellana HOM05D005933 ORTHO05D007366 7.2e-166 587.8 451 65.6
CANSAT78G0457 Cannabis sativa HOM05D005933 ORTHO05D007366 2.1e-165 586.3 475 64.4
QL07p000522 Quercus lobata HOM05D005933 ORTHO05D007366 3.6e-165 585.5 460 65.0
Eucgr.A02347 Eucalyptus grandis HOM05D005933 ORTHO05D007366 1.4e-164 583.6 464 65.7
TWI74G0083 Tripterygium wilfordii HOM05D005933 ORTHO05D007366 8.8e-164 580.9 468 64.3
Actinidia39225 Actinidia chinensis HOM05D005933 ORTHO05D007366 4.4e-163 578.6 476 62.6
MD12G1074000 Malus domestica HOM05D005933 ORTHO05D007366 8.2e-162 574.3 471 64.1
QL07p000555 Quercus lobata HOM05D005933 ORTHO05D007366 8.2e-162 574.3 463 64.6
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 1.3e-159 567.0 441 65.1
Duzib093G2041 Durio zibethinus HOM05D005933 ORTHO05D007366 1.7e-159 566.6 461 62.7
Actinidia09329 Actinidia chinensis HOM05D005933 ORTHO05D007366 8.5e-159 564.3 477 61.2
Potri.006G051300 Populus trichocarpa HOM05D005933 ORTHO05D007366 1.5e-158 563.5 461 62.7
PGR004G0721 Punica granatum HOM05D005933 ORTHO05D007366 2.5e-158 562.8 470 63.4
Manes.09G022000 Manihot esculenta HOM05D005933 ORTHO05D007366 2.7e-157 559.3 451 64.1
GSVIVG01033275001 Vitis vinifera HOM05D005933 ORTHO05D007366 4.7e-157 558.5 473 61.9
THA.LOC104811196 Tarenaya hassleriana HOM05D005933 ORTHO05D007366 1.8e-156 556.6 458 61.1
Sabra06G0036000 Salix brachista HOM05D005933 ORTHO05D007366 2.0e-155 553.1 454 62.6
COL.COLO4_28284 Corchorus olitorius HOM05D005933 ORTHO05D007366 2.6e-155 552.7 456 62.5
Thecc.05G153300 Theobroma cacao HOM05D005933 ORTHO05D007366 9.8e-155 550.8 464 61.9
Gohir.D11G173800 Gossypium hirsutum HOM05D005933 ORTHO05D007366 2.8e-154 549.3 461 62.0
Gorai.007G186200 Gossypium raimondii HOM05D005933 ORTHO05D007366 6.3e-154 548.1 461 62.0
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 1.8e-153 546.6 473 60.3
Gohir.A11G167500 Gossypium hirsutum HOM05D005933 ORTHO05D007366 3.1e-153 545.8 462 62.3
MELO3C009712.2 Cucumis melo HOM05D005933 ORTHO05D007366 2.2e-151 539.7 478 59.4
CsaV3_3G039700 Cucumis sativus L. HOM05D005933 ORTHO05D007366 5.0e-151 538.5 477 58.9
Sed0001053 Sechium edule HOM05D005933 ORTHO05D007366 8.5e-151 537.7 466 60.3
AT4G35910 Arabidopsis thaliana HOM05D005933 ORTHO05D007366 4.2e-150 535.4 457 57.8
CARHR244310 Cardamine hirsuta HOM05D005933 ORTHO05D007366 1.2e-149 533.9 458 58.7
DCAR_009061 Daucus carota HOM05D005933 ORTHO05D007366 2.8e-149 532.7 480 56.5
Cc06_g17560 Coffea canephora HOM05D005933 ORTHO05D007366 1.0e-148 530.8 491 56.6
Peaxi162Scf00618g00022 Petunia axillaris HOM05D005933 ORTHO05D007366 1.0e-148 530.8 468 58.3
CSS0022562 Camellia sinensis var. sinensis HOM05D005933 ORTHO05D007366 1.4e-148 530.4 471 58.4
AL7G15130 Arabidopsis lyrata HOM05D005933 ORTHO05D007366 1.8e-148 530.0 458 58.1
Thhalv10025158m.g Eutrema salsugineum HOM05D005933 ORTHO05D007366 2.3e-148 529.6 458 58.3
Sp7g34530 Schrenkiella parvula HOM05D005933 ORTHO05D007366 2.3e-148 529.6 458 58.1
Lju124A41G42 Lonicera japonica HOM05D005933 ORTHO05D007366 5.2e-148 528.5 433 64.0
Solyc10g080110.3 Solanum lycopersicum HOM05D005933 ORTHO05D007366 2.6e-147 526.2 480 57.7
ClCG10G016640 Citrullus lanatus HOM05D005933 ORTHO05D007366 7.5e-147 524.6 520 55.4
Sopen10g030730 Solanum pennellii HOM05D005933 ORTHO05D007366 3.7e-146 522.3 480 57.5
MSTRG.19860 Avicennia marina HOM05D005933 ORTHO05D007366 8.3e-146 521.2 480 57.5
Aa31LG6G13690 Aethionema arabicum HOM05D005933 ORTHO05D007366 1.8e-145 520.0 460 57.0
Carub.0007s0431 Capsella rubella HOM05D005933 ORTHO05D007366 4.1e-145 518.8 457 57.3
Hund05286 Selenicereus undatus HOM05D005933 ORTHO05D007366 4.1e-145 518.8 440 60.9
A01p02040 Brassica napus HOM05D005933 ORTHO05D007366 5.4e-145 518.5 458 57.9
Cpa.g.sc92.52 Carica papaya HOM05D005933 ORTHO05D007366 7.0e-145 518.1 456 59.6
PGSC0003DMG400023688 Solanum tuberosum HOM05D005933 ORTHO05D007366 1.6e-144 516.9 485 56.7
Rhsim03G0022400 Rhododendron simsii HOM05D005933 ORTHO05D007366 2.7e-144 516.2 469 57.6
C01p02220 Brassica napus HOM05D005933 ORTHO05D007366 3.5e-144 515.8 458 57.0
Rhsim03G0021100 Rhododendron simsii HOM05D005933 ORTHO05D007366 3.5e-144 515.8 464 57.8
vmacro07854 Vaccinium macrocarpon HOM05D005933 ORTHO05D007366 5.9e-144 515.0 504 54.0
BolC1t00214H Brassica oleracea HOM05D005933 ORTHO05D007366 1.0e-143 514.2 458 57.2
Dinv39604 Davidia involucrata HOM05D005933 ORTHO05D007366 3.8e-143 512.3 389 67.4
BraA01t00193Z Brassica rapa HOM05D005933 ORTHO05D007366 5.0e-143 511.9 458 57.0
AUR62026040 Chenopodium quinoa HOM05D005933 ORTHO05D007366 5.0e-143 511.9 462 57.8
HanXRQChr09g0252561 Helianthus annuus HOM05D005933 ORTHO05D007366 5.0e-143 511.9 468 58.3
Lsat_1_v5_gn_8_81281 Lactuca sativa HOM05D005933 ORTHO05D007366 8.6e-143 511.1 472 58.7
EL10Ac3g07091 Beta vulgaris HOM05D005933 ORTHO05D007366 2.5e-142 509.6 468 57.5
Migut.J01758 Erythranthe guttata HOM05D005933 ORTHO05D007366 8.0e-141 504.6 481 57.2
ECA236G1702 Erigeron canadensis HOM05D005933 ORTHO05D007366 1.2e-139 500.7 471 56.5
Oeu017944.1 Olea europaea HOM05D005933 ORTHO05D007366 1.5e-139 500.4 465 56.1
BcaNung03520 Brassica carinata HOM05D005933 ORTHO05D007366 2.6e-139 499.6 460 57.2
Nitab4.5_0009442g0020 Nicotiana tabacum HOM05D005933 ORTHO05D007366 4.6e-136 488.8 469 55.2
Nitab4.5_0008648g0010 Nicotiana tabacum HOM05D005933 ORTHO05D007366 5.9e-136 488.4 500 52.4
Atru.chr1.1098 Acer truncatum HOM05D005933 ORTHO05D007366 3.9e-135 485.7 442 59.5
PSO782G3339 Papaver somniferum HOM05D005933 ORTHO05D007366 1.1e-134 484.2 470 56.2
SalBow6G0452 Salvia bowleyana HOM05D005933 ORTHO05D007366 3.3e-134 482.6 450 56.2
Aqoxy5G03564 Aquilegia oxysepala HOM05D005933 ORTHO05D007366 8.9e-132 474.6 467 53.7
Ah.13g075070 Amaranthus hybridus HOM05D005933 ORTHO05D007366 1.2e-131 474.2 446 55.2
SGA_v2.0_scaffold69G23116 Striga asiatica HOM05D005933 ORTHO05D007366 5.8e-131 471.9 468 53.0
Cfa008569 Carpinus fangiana HOM05D005933 ORTHO05D007366 4.1e-129 465.7 337 67.7
Peaxi162Scf00354g00225 Petunia axillaris HOM05D005933 ORTHO05D007366 7.0e-129 464.9 454 54.0
AUR62024451 Chenopodium quinoa HOM05D005933 ORTHO05D007366 6.0e-128 461.8 497 51.7
CAN.G128.8 Capsicum annuum HOM05D005933 ORTHO05D007366 2.9e-122 443.0 380 60.3
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 1.1e-121 441.0 362 61.9
ATR0686G233 Amborella trichopoda HOM05D005933 ORTHO05D007366 8.9e-116 421.4 458 49.8
Os12g0588900 Oryza sativa ssp. japonica HOM05D005933 ORTHO05D007366 7.3e-110 401.7 427 51.3
Prupe.7G060900 Prunus persica HOM05D005933 ORTHO05D007366 2.1e-109 400.2 321 64.2
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 1.4e-108 397.5 464 49.4
MBI16_g31719_MAGBIO Magnolia biondii HOM05D005933 ORTHO05D007366 1.3e-106 391.0 462 49.1
Glyma.19G139200 Glycine max HOM05D005933 ORTHO05D007366 3.8e-106 389.4 234 82.9
Oeu008914.1 Olea europaea HOM05D005933 ORTHO05D007366 2.7e-104 383.3 352 55.4
Oeu008916.1 Olea europaea HOM05D005933 ORTHO05D007366 2.7e-104 383.3 352 55.4
Zm00001eb135000 Zea mays HOM05D005933 ORTHO05D007366 3.8e-98 362.8 465 45.8
Sc13g0001740 Simmondsia chinensis HOM05D005933 ORTHO05D007366 6.4e-98 362.1 288 63.2
SEGI_18184 Sequoiadendron giganteum HOM05D005933 ORTHO05D007366 7.1e-97 358.6 478 42.7
SHI32975 Sapria himalayana HOM05D005933 ORTHO05D000023 4.3e-94 349.4 366 50.8
CDE09G0169 Ceratophyllum demersum HOM05D005933 ORTHO05D007366 6.9e-84 315.5 258 60.9
BcaNung04276 Brassica carinata HOM05D005933 ORTHO05D007366 9.3e-81 305.1 436 44.3
HPP92_017763 Vanilla planifolia HOM05D005933 ORTHO05D007366 1.6e-80 304.3 353 45.3
TAR633G2718 Trochodendron aralioides HOM05D005933 ORTHO05D007366 1.9e-78 297.4 230 64.8
Mapoly0165s0023 Marchantia polymorpha HOM05D005933 ORTHO05D007366 1.8e-76 290.8 493 37.3
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis HOM05D005933 ORTHO05D007366 7.4e-70 268.9 457 38.3
SMO145G0218 Selaginella moellendorffii HOM05D005933 ORTHO05D007366 2.5e-65 253.8 348 42.5
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 4.7e-64 249.6 377 42.7
Pp3c14_19420 Physcomitrium patens HOM05D005933 ORTHO05D007366 4.2e-57 226.5 294 42.5
Cfa017749 Carpinus fangiana HOM05D005933 ORTHO05D007366 2.8e-53 213.8 224 52.2
Rhsim03G0020400 Rhododendron simsii HOM05D005933 ORTHO05D007366 4.8e-53 213.0 232 50.9
C07p62070 Brassica napus HOM05D005933 ORTHO05D007366 1.8e-47 194.5 160 61.2
BolC7t46624H Brassica oleracea HOM05D005933 ORTHO05D007366 1.8e-47 194.5 160 61.2
CDE02G1215 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 4.0e-47 193.4 173 55.5
Atru.chr1.1100 Acer truncatum HOM05D005933 ORTHO05D007366 7.5e-46 189.1 178 56.7
MD12G1074100 Malus domestica HOM05D005933 ORTHO05D007366 3.1e-44 183.7 167 57.5
CBR_g982 Chara braunii HOM05D005933 ORTHO05D007366 5.2e-39 166.4 447 29.3
Cc06_g12380 Coffea canephora HOM05D005933 ORTHO05D007366 5.4e-36 156.4 183 48.6
Sc13g0001730 Simmondsia chinensis HOM05D005933 ORTHO05D007366 2.7e-35 154.1 157 52.2
TAR633G2604 Trochodendron aralioides HOM05D005933 ORTHO05D007366 7.7e-35 152.5 102 70.6
BcaNung03522 Brassica carinata HOM05D005933 ORTHO05D007366 3.0e-31 140.6 146 48.6
TAR636G2120 Trochodendron aralioides HOM05D005933 ORTHO05D007366 8.9e-31 139.0 116 59.5
Cre01.g043500 Chlamydomonas reinhardtii HOM05D005933 ORTHO05D007366 2.0e-22 111.3 239 33.1
Dinv12483 Davidia involucrata HOM05D005933 ORTHO05D007366 6.0e-19 99.8 106 53.8
Nn8g40508 Nelumbo nucifera HOM05D005933 ORTHO05D007366 1.7e-18 98.2 67 67.2
SHI32976 Sapria himalayana HOM05D000105 ORTHO05D000023 7.5e-14 82.8 106 46.2
Rhsim03G0022600 Rhododendron simsii HOM05D005933 ORTHO05D007366 3.3e-09 67.4 52 65.4
Rhsim03G0024000 Rhododendron simsii HOM05D005933 ORTHO05D007366 5.6e-09 66.6 52 65.4
Nn8g40507 Nelumbo nucifera HOM05D005933 ORTHO05D007366 7.3e-09 66.2 90 42.2


User provided reference genes

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