Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07429_v3 Cicer arietinum L. HOM05D006314 ORTHO05D007970 5.3e-96 354.8 235 100.0
TPR.G10185 Trifolium pratense HOM05D006314 ORTHO05D007970 5.5e-77 291.6 225 89.3
Medtr7g047630 Medicago truncatula HOM05D006314 ORTHO05D007970 5.1e-75 285.0 216 90.7
Medtr7g451810 Medicago truncatula HOM05D006314 ORTHO05D007970 5.1e-75 285.0 216 90.7
Glyma.01G240700 Glycine max HOM05D006314 ORTHO05D007970 4.5e-71 271.9 225 85.3
Lj1g0010466 Lotus japonicus HOM05D006314 ORTHO05D007970 3.8e-70 268.9 226 83.6
Phvul.002G049200 Phaseolus vulgaris HOM05D006314 ORTHO05D007970 1.4e-69 266.9 225 83.6
VMungo1215G0781 Vigna mungo HOM05D006314 ORTHO05D007970 1.2e-68 263.8 218 84.9
Gorai.010G176200 Gossypium raimondii HOM05D006314 ORTHO05D007970 2.5e-66 256.1 227 71.8
QL05p075316 Quercus lobata HOM05D006314 ORTHO05D007970 2.5e-66 256.1 225 74.2
COL.COLO4_31719 Corchorus olitorius HOM05D006314 ORTHO05D007970 8.2e-65 251.1 226 70.4
Gohir.A06G145000 Gossypium hirsutum HOM05D006314 ORTHO05D007970 3.1e-64 249.2 227 65.2
Prupe.4G027100 Prunus persica HOM05D006314 ORTHO05D007970 5.3e-64 248.4 224 70.1
Duzib235G0913 Durio zibethinus HOM05D006314 ORTHO05D007970 2.6e-63 246.1 241 63.1
AL6G48810 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 3.4e-63 245.7 234 62.0
CiPaw.09G086300 Carya illinoinensis HOM05D006314 ORTHO05D007970 1.3e-62 243.8 230 67.0
CiPaw.09G085200 Carya illinoinensis HOM05D006314 ORTHO05D007970 2.2e-62 243.0 224 67.9
MD05G1340500 Malus domestica HOM05D006314 ORTHO05D007970 5.0e-62 241.9 224 73.2
GSVIVG01012621001 Vitis vinifera HOM05D006314 ORTHO05D007970 1.6e-60 236.9 231 61.5
Cfa021643 Carpinus fangiana HOM05D006314 ORTHO05D007970 3.6e-60 235.7 239 64.0
Potri.004G039400 Populus trichocarpa HOM05D006314 ORTHO05D007970 6.1e-60 235.0 215 66.5
Manes.14G141100 Manihot esculenta HOM05D006314 ORTHO05D007970 7.9e-60 234.6 223 68.6
Cpa.g.sc81.24 Carica papaya HOM05D006314 ORTHO05D007970 5.1e-59 231.9 226 61.1
MBI02_g34312_MAGBIO Magnolia biondii HOM05D006314 ORTHO05D007970 8.8e-59 231.1 215 76.3
Lsat_1_v5_gn_7_17861 Lactuca sativa HOM05D006314 ORTHO05D007970 2.5e-58 229.6 225 69.3
Psat3g152680 Pisum sativum HOM05D006314 ORTHO05D007970 2.5e-58 229.6 159 82.4
RcHm_v2.0_Chr5g0004131 Rosa chinensis HOM05D006314 ORTHO05D007970 3.3e-58 229.2 231 73.2
Sabra04G0024200 Salix brachista HOM05D006314 ORTHO05D007970 5.7e-58 228.4 257 53.7
EL10Ac8g19905 Beta vulgaris HOM05D006314 ORTHO05D007970 1.7e-57 226.9 225 64.0
MELO3C007369.2 Cucumis melo HOM05D006314 ORTHO05D007970 3.7e-57 225.7 214 71.5
CsaV3_6G049280 Cucumis sativus L. HOM05D006314 ORTHO05D007970 3.7e-57 225.7 214 70.6
Ciclev10018286m.g Citrus clementina HOM05D006314 ORTHO05D007970 4.8e-57 225.3 220 68.2
ECA236G4636 Erigeron canadensis HOM05D006314 ORTHO05D007970 6.3e-57 224.9 228 61.8
ClCG01G022220 Citrullus lanatus HOM05D006314 ORTHO05D007970 1.4e-56 223.8 214 71.0
FvH4_3g02730 Fragaria vesca HOM05D006314 ORTHO05D007970 1.4e-56 223.8 217 75.6
SEGI_37493 Sequoiadendron giganteum HOM05D006314 ORTHO05D007970 4.1e-56 222.2 215 60.5
SGA_v2.0_scaffold7G03887 Striga asiatica HOM05D006314 ORTHO05D007970 5.3e-56 221.9 219 62.1
Lj1A1224T36 Lonicera japonica HOM05D006314 ORTHO05D007970 1.2e-55 220.7 222 71.2
Lalb_Chr16g0376341 Lupinus albus HOM05D006314 ORTHO05D007970 1.2e-55 220.7 217 77.0
Ah.14g088200 Amaranthus hybridus HOM05D006314 ORTHO05D007970 2.6e-55 219.5 215 60.0
HanXRQChr05g0130041 Helianthus annuus HOM05D006314 ORTHO05D007970 4.5e-55 218.8 215 68.8
AT4G05210 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 1.0e-54 217.6 230 58.3
AL7G32880 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 1.7e-54 216.9 231 59.3
DCAR_004187 Daucus carota HOM05D006314 ORTHO05D007970 2.2e-54 216.5 214 73.4
Carub.0007s2019 Capsella rubella HOM05D006314 ORTHO05D007970 1.1e-53 214.2 217 62.2
Haze_06726 Corylus avellana HOM05D006314 ORTHO05D007970 3.2e-53 212.6 268 52.6
BcaB01g01893 Brassica carinata HOM05D006314 ORTHO05D007970 4.2e-53 212.2 215 59.1
SalBow8G4748 Salvia bowleyana HOM05D006314 ORTHO05D007970 4.2e-53 212.2 233 56.7
Thhalv10025838m.g Eutrema salsugineum HOM05D006314 ORTHO05D007970 5.5e-53 211.8 231 63.6
Gohir.D06G151200 Gossypium hirsutum HOM05D006314 ORTHO05D007970 9.4e-53 211.1 159 63.5
Hund21374 Selenicereus undatus HOM05D006314 ORTHO05D007970 9.4e-53 211.1 211 55.9
A09p25520 Brassica napus HOM05D006314 ORTHO05D007970 1.2e-52 210.7 219 58.4
CAN.G404.73 Capsicum annuum HOM05D006314 ORTHO05D007970 1.2e-52 210.7 230 60.0
PSO541G6217 Papaver somniferum HOM05D006314 ORTHO05D007970 1.2e-52 210.7 237 62.0
ATR0618G448 Amborella trichopoda HOM05D006314 ORTHO05D007970 1.6e-52 210.3 214 65.0
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea HOM05D006314 ORTHO05D007970 2.1e-52 209.9 214 74.3
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea HOM05D006314 ORTHO05D007970 2.1e-52 209.9 214 74.3
BcaC04g21385 Brassica carinata HOM05D006314 ORTHO05D007970 6.1e-52 208.4 219 57.5
C09p32430 Brassica napus HOM05D006314 ORTHO05D007970 6.1e-52 208.4 219 57.5
BolC9t56088H Brassica oleracea HOM05D006314 ORTHO05D007970 6.1e-52 208.4 219 57.5
THA.LOC104812945 Tarenaya hassleriana HOM05D006314 ORTHO05D007970 7.9e-52 208.0 217 72.8
Migut.M01276 Erythranthe guttata HOM05D006314 ORTHO05D007970 1.0e-51 207.6 229 59.4
PSO675G3227 Papaver somniferum HOM05D006314 ORTHO05D007970 1.0e-51 207.6 237 61.2
AT4G21220 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 1.8e-51 206.8 229 56.8
BraA09t38127Z Brassica rapa HOM05D006314 ORTHO05D007970 3.0e-51 206.1 219 57.1
Nn1g03656 Nelumbo nucifera HOM05D006314 ORTHO05D007970 6.7e-51 204.9 227 59.0
Aqoxy5G01372 Aquilegia oxysepala HOM05D006314 ORTHO05D007970 2.0e-50 203.4 232 55.6
Cc00_g17320 Coffea canephora HOM05D006314 ORTHO05D007970 4.4e-50 202.2 224 70.1
Actinidia05538 Actinidia chinensis HOM05D006314 ORTHO05D007970 7.4e-50 201.4 214 66.8
Sp6g03780 Schrenkiella parvula HOM05D006314 ORTHO05D007970 7.4e-50 201.4 214 74.8
Eucgr.D00832 Eucalyptus grandis HOM05D006314 ORTHO05D007970 1.3e-49 200.7 230 61.7
CARHR227820 Cardamine hirsuta HOM05D006314 ORTHO05D007970 2.2e-49 199.9 228 63.6
Oeu002711.1 Olea europaea HOM05D006314 ORTHO05D007970 2.2e-49 199.9 215 63.7
FAN21G1433 Fragaria x ananassa HOM05D006314 ORTHO05D007970 2.8e-49 199.5 232 50.9
Thecc.06G213300 Theobroma cacao HOM05D006314 ORTHO05D007970 2.8e-49 199.5 165 69.7
CANSAT56G1066 Cannabis sativa HOM05D006314 ORTHO05D007970 8.2e-49 198.0 230 60.4
Haze_06729 Corylus avellana HOM05D006314 ORTHO05D007970 3.1e-48 196.1 154 76.6
PGR031G0385 Punica granatum HOM05D006314 ORTHO05D007970 4.1e-48 195.7 220 61.4
Sc05g0008810 Simmondsia chinensis HOM05D006314 ORTHO05D007970 2.6e-47 193.0 222 66.2
Rhsim13G0158200 Rhododendron simsii HOM05D006314 ORTHO05D007970 3.8e-46 189.1 239 58.6
Aa31LG9G9230 Aethionema arabicum HOM05D006314 ORTHO05D007970 1.5e-45 187.2 234 53.0
Solyc03g031560.4 Solanum lycopersicum HOM05D006314 ORTHO05D007970 2.5e-45 186.4 238 50.4
Nitab4.5_0004428g0040 Nicotiana tabacum HOM05D006314 ORTHO05D007970 7.2e-45 184.9 227 47.1
HPP92_009390 Vanilla planifolia HOM05D006314 ORTHO05D007970 3.6e-44 182.6 215 55.3
Sopen03g005440 Solanum pennellii HOM05D006314 ORTHO05D007970 8.0e-44 181.4 224 62.9
Dinv17838 Davidia involucrata HOM05D006314 ORTHO05D007970 1.4e-43 180.6 157 65.6
HPP92_009395 Vanilla planifolia HOM05D006314 ORTHO05D007970 2.6e-42 176.4 231 51.9
Glyma.11G002900 Glycine max HOM05D006314 ORTHO05D007970 3.3e-42 176.0 151 60.9
Actinidia26953 Actinidia chinensis HOM05D006314 ORTHO05D007970 4.4e-42 175.6 151 64.9
AUR62012635 Chenopodium quinoa HOM05D006314 ORTHO05D007970 5.7e-42 175.3 236 55.5
vmacro03713 Vaccinium macrocarpon HOM05D006314 ORTHO05D007970 1.7e-41 173.7 146 62.3
CDE05G2602 Ceratophyllum demersum HOM05D006314 ORTHO05D007970 6.3e-41 171.8 215 52.6
Mapoly0013s0096 Marchantia polymorpha HOM05D006314 ORTHO05D007970 2.7e-39 166.4 215 48.4
FAN25G2977 Fragaria x ananassa HOM05D006314 ORTHO05D007970 1.3e-38 164.1 263 44.9
PGSC0003DMG400005049 Solanum tuberosum HOM05D006314 ORTHO05D007970 7.2e-37 158.3 156 60.9
Zm00001eb306890 Zea mays HOM05D006314 ORTHO05D007970 2.1e-36 156.8 217 63.1
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis HOM05D006314 ORTHO05D007970 3.6e-36 156.0 211 55.9
TWI38G0264 Tripterygium wilfordii HOM05D006314 ORTHO05D007970 1.8e-35 153.7 214 50.9
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla HOM05D006314 ORTHO05D007970 3.0e-35 152.9 166 48.8
CBR_g20160 Chara braunii HOM05D006314 ORTHO05D007970 3.4e-34 149.4 228 48.7
Nitab4.5_0000900g0100 Nicotiana tabacum HOM05D006314 ORTHO05D007970 2.0e-31 140.2 227 49.3
Sed0025568 Sechium edule HOM05D006314 ORTHO05D007970 5.9e-31 138.7 214 60.3
AUR62022021 Chenopodium quinoa HOM05D006314 ORTHO05D007970 1.1e-29 134.4 214 44.4
PRCOL_00005452 Prasinoderma coloniale HOM05D006314 ORTHO05D007970 1.2e-28 131.0 149 64.4
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 6.8e-27 125.2 144 47.2
MSTRG.16127 Avicennia marina HOM05D006314 ORTHO05D007970 4.9e-25 119.0 115 52.2
Peaxi162Scf00781g00047 Petunia axillaris HOM05D006314 ORTHO05D007970 2.0e-23 113.6 262 44.7
Nn5g27983 Nelumbo nucifera HOM05D006314 ORTHO05D007970 3.5e-23 112.8 107 54.2
Pp3c4_25780 Physcomitrium patens HOM05D006314 ORTHO05D007970 3.5e-23 112.8 215 44.2
CSS0018641 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 4.7e-20 102.4 102 61.8
CSS0045332 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 5.2e-19 99.0 111 63.1
SMO361G0013 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 1.5e-18 97.4 213 44.6
SMO004G0010 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 4.4e-18 95.9 215 37.7
TAR627G0699 Trochodendron aralioides HOM05D006314 ORTHO05D007970 3.0e-14 83.2 91 61.5
FAN25G3594 Fragaria x ananassa HOM05D006314 ORTHO05D007970 4.7e-12 75.9 43 79.1
Os07g0134400 Oryza sativa ssp. japonica HOM05D006314 ORTHO05D007970 2.6e-10 70.1 105 44.8
Lsat_1_v5_gn_5_88320 Lactuca sativa HOM05D006314 ORTHO05D007970 2.0e-07 60.5 96 36.5
QL08p032503 Quercus lobata HOM05D006314 ORTHO05D030082 2.7e-07 60.1 60 48.3
QL05p075461 Quercus lobata HOM05D006314 ORTHO05D030082 1.0e-06 58.2 54 50.0
MD10G1313900 Malus domestica HOM05D006314 ORTHO05D030082 5.0e-06 55.8 39 56.4


User provided reference genes

Program Settings