Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06299_v3 Cicer arietinum L. HOM05D003624 ORTHO05D004188 3.4e-58 228.4 142 100.0
Ca_06298_v3 Cicer arietinum L. HOM05D003624 ORTHO05D004188 4.6e-55 218.0 141 85.1
Ca_06309_v3 Cicer arietinum L. HOM05D003624 ORTHO05D004188 2.8e-52 208.8 141 81.6
Psat2g013120 Pisum sativum HOM05D003624 ORTHO05D004188 2.1e-47 192.6 141 74.5
Lalb_Chr03g0040441 Lupinus albus HOM05D003624 ORTHO05D004188 4.1e-43 178.3 142 70.4
Lalb_Chr04g0248651 Lupinus albus HOM05D003624 ORTHO05D004188 2.0e-42 176.0 142 70.4
TPR.G29126 Trifolium pratense HOM05D003624 ORTHO05D004188 2.6e-42 175.6 141 80.9
Glyma.14G026000 Glycine max HOM05D003624 ORTHO05D004188 2.9e-41 172.2 142 80.3
LjContig00310g0027848 Lotus japonicus HOM05D003624 ORTHO05D004188 1.4e-40 169.9 141 68.8
Phvul.003G195200 Phaseolus vulgaris HOM05D003624 ORTHO05D004188 6.1e-39 164.5 143 66.4
Glyma.02G288800 Glycine max HOM05D003624 ORTHO05D004188 1.4e-38 163.3 142 77.5
Ca_20539_v3 Cicer arietinum L. HOM05D003624 ORTHO05D004188 8.8e-38 160.6 99 88.9
Phvul.008G264800 Phaseolus vulgaris HOM05D003624 ORTHO05D004188 2.0e-37 159.5 141 66.0
Lj3g0027074 Lotus japonicus HOM05D003624 ORTHO05D004188 1.1e-35 153.7 141 67.4
Lj3g0001422 Lotus japonicus HOM05D003624 ORTHO05D004188 2.4e-35 152.5 141 73.8
VMungo0647G0302 Vigna mungo HOM05D003624 ORTHO05D004188 5.9e-34 147.9 143 62.2
Medtr5g092130 Medicago truncatula HOM05D003624 ORTHO05D004188 8.8e-30 134.0 142 57.7
CANSAT54G1653 Cannabis sativa HOM05D003624 ORTHO05D004188 2.8e-28 129.0 142 56.3
arahy.Tifrunner.gnm1.ann1.2R0TK7 Arachis hypogaea HOM05D003624 ORTHO05D004188 4.1e-27 125.2 144 66.7
Hma1.2p1_0493F.1_g164850 Hydrangea macrophylla HOM05D003624 ORTHO05D004188 2.9e-25 119.0 143 53.1
Haze_15559 Corylus avellana HOM05D003624 ORTHO05D004188 7.2e-24 114.4 141 51.1
Prupe.2G234600 Prunus persica HOM05D003624 ORTHO05D004188 8.0e-23 110.9 141 49.6
Prupe.4G141300 Prunus persica HOM05D003624 ORTHO05D004188 1.4e-22 110.2 141 50.4
Sed0019448 Sechium edule HOM05D003624 ORTHO05D004188 1.4e-22 110.2 143 48.3
CiPaw.01G286800 Carya illinoinensis HOM05D003624 ORTHO05D004188 1.8e-22 109.8 149 51.0
ClCG01G013570 Citrullus lanatus HOM05D003624 ORTHO05D004188 8.8e-22 107.5 141 46.8
ClCG05G013440 Citrullus lanatus HOM05D003624 ORTHO05D004188 2.0e-21 106.3 141 46.1
PGR142G3002 Punica granatum HOM05D003624 ORTHO05D004188 2.6e-21 105.9 140 49.3
Dinv27204 Davidia involucrata HOM05D003624 ORTHO05D004188 3.4e-21 105.5 141 47.5
Prupe.1G588200 Prunus persica HOM05D003624 ORTHO05D004188 5.7e-21 104.8 141 48.2
MD01G1133500 Malus domestica HOM05D003624 ORTHO05D004188 9.8e-21 104.0 141 48.9
Gohir.D10G228000 Gossypium hirsutum HOM05D003624 ORTHO05D004188 1.3e-20 103.6 141 46.1
Gorai.011G260400 Gossypium raimondii HOM05D003624 ORTHO05D004188 1.3e-20 103.6 141 46.1
Prupe.6G266400 Prunus persica HOM05D003624 ORTHO05D004188 2.2e-20 102.8 141 48.9
QL06p008449 Quercus lobata HOM05D003624 ORTHO05D004188 6.3e-20 101.3 142 48.6
MELO3C014877.2 Cucumis melo HOM05D003624 ORTHO05D004188 8.3e-20 100.9 144 44.4
CsaV3_3G027090 Cucumis sativus L. HOM05D003624 ORTHO05D004188 8.3e-20 100.9 147 45.6
Gohir.A10G218400 Gossypium hirsutum HOM05D003624 ORTHO05D004188 8.3e-20 100.9 141 45.4
QL09p007395 Quercus lobata HOM05D003624 ORTHO05D004188 8.3e-20 100.9 141 50.4
QL93p0214_0025 Quercus lobata HOM05D003624 ORTHO05D004188 8.3e-20 100.9 141 50.4
Sc10g0001520 Simmondsia chinensis HOM05D003624 ORTHO05D004188 8.3e-20 100.9 140 43.6
Potri.008G055300 Populus trichocarpa HOM05D003624 ORTHO05D004188 1.1e-19 100.5 142 47.2
TAR636G1411 Trochodendron aralioides HOM05D003624 ORTHO05D004188 1.1e-19 100.5 142 47.9
Eucgr.C04375 Eucalyptus grandis HOM05D003624 ORTHO05D004188 1.4e-19 100.1 140 53.6
Peaxi162Scf00015g01215 Petunia axillaris HOM05D003624 ORTHO05D004188 1.8e-19 99.8 145 46.2
Peaxi162Scf00015g10126 Petunia axillaris HOM05D003624 ORTHO05D004188 1.8e-19 99.8 145 46.2
Peaxi162Scf00271g00059 Petunia axillaris HOM05D003624 ORTHO05D004188 1.8e-19 99.8 145 46.2
Duzib114G1042 Durio zibethinus HOM05D003624 ORTHO05D004188 2.4e-19 99.4 144 49.3
Peaxi162Scf00001g00045 Petunia axillaris HOM05D003624 ORTHO05D004188 3.1e-19 99.0 145 45.5
vmacro17110 Vaccinium macrocarpon HOM05D003624 ORTHO05D004188 3.1e-19 99.0 141 46.8
Nn3g21232 Nelumbo nucifera HOM05D003624 ORTHO05D004188 1.2e-18 97.1 141 46.1
QL08p059869 Quercus lobata HOM05D003624 ORTHO05D004188 2.0e-18 96.3 139 48.2
Nn6g34375 Nelumbo nucifera HOM05D003624 ORTHO05D004188 2.7e-18 95.9 141 47.5
Oeu048253.2 Olea europaea HOM05D003624 ORTHO05D004188 2.7e-18 95.9 146 44.5
CDE07G1603 Ceratophyllum demersum HOM05D003624 ORTHO05D004188 3.5e-18 95.5 142 45.8
RcHm_v2.0_Chr1g0367021 Rosa chinensis HOM05D003624 ORTHO05D004188 4.5e-18 95.1 140 50.7
Cpa.g.sc1.400 Carica papaya HOM05D003624 ORTHO05D004188 5.9e-18 94.7 148 41.9
Cc07_g19190 Coffea canephora HOM05D003624 ORTHO05D004188 5.9e-18 94.7 141 46.8
Manes.07G115700 Manihot esculenta HOM05D003624 ORTHO05D004188 5.9e-18 94.7 145 45.5
CAN.G862.53 Capsicum annuum HOM05D003624 ORTHO05D004188 7.7e-18 94.4 144 43.8
Lj2C36T16 Lonicera japonica HOM05D003624 ORTHO05D004188 1.0e-17 94.0 142 47.2
Potri.010G204900 Populus trichocarpa HOM05D003624 ORTHO05D004188 1.3e-17 93.6 147 41.5
THA.LOC104815670 Tarenaya hassleriana HOM05D003624 ORTHO05D004188 1.3e-17 93.6 153 49.0
Nitab4.5_0006489g0020 Nicotiana tabacum HOM05D003624 ORTHO05D004188 2.3e-17 92.8 146 45.2
PSO339G0082 Papaver somniferum HOM05D003624 ORTHO05D004188 2.9e-17 92.4 145 46.2
CARHR045130 Cardamine hirsuta HOM05D003624 ORTHO05D004188 5.0e-17 91.7 150 46.0
PSO384G3632 Papaver somniferum HOM05D003624 ORTHO05D004188 5.0e-17 91.7 145 46.2
Rhsim03G0131100 Rhododendron simsii HOM05D003624 ORTHO05D004188 5.0e-17 91.7 141 46.8
Carub.0001s4395 Capsella rubella HOM05D003624 ORTHO05D004188 6.5e-17 91.3 153 39.9
Rhsim05G0153700 Rhododendron simsii HOM05D003624 ORTHO05D004188 6.5e-17 91.3 141 45.4
AL1G63460 Arabidopsis lyrata HOM05D003624 ORTHO05D004188 8.6e-17 90.9 156 39.7
Aa31LG10G790 Aethionema arabicum HOM05D003624 ORTHO05D004188 1.5e-16 90.1 156 39.1
Nitab4.5_0001992g0010 Nicotiana tabacum HOM05D003624 ORTHO05D004188 1.5e-16 90.1 147 44.2
Sabra08G0039900 Salix brachista HOM05D003624 ORTHO05D004188 1.5e-16 90.1 142 52.1
AT1G55460 Arabidopsis thaliana HOM05D003624 ORTHO05D004188 2.5e-16 89.4 155 37.4
RcHm_v2.0_Chr2g0124981 Rosa chinensis HOM05D003624 ORTHO05D004188 4.2e-16 88.6 138 47.1
MBI12_g10423_MAGBIO Magnolia biondii HOM05D003624 ORTHO05D004188 5.5e-16 88.2 141 44.7
CDE04G0801 Ceratophyllum demersum HOM05D003624 ORTHO05D004188 7.2e-16 87.8 151 43.0
Cc04_g09670 Coffea canephora HOM05D003624 ORTHO05D004188 7.2e-16 87.8 141 44.7
TWI60G1571 Tripterygium wilfordii HOM05D003624 ORTHO05D004188 7.2e-16 87.8 141 52.5
CSS0018661 Camellia sinensis var. sinensis HOM05D003624 ORTHO05D004188 1.6e-15 86.7 144 46.5
DCAR_001936 Daucus carota HOM05D003624 ORTHO05D004188 1.6e-15 86.7 141 42.6
MD07G1197800 Malus domestica HOM05D003624 ORTHO05D004188 3.6e-15 85.5 145 44.8
FvH4_7g22390 Fragaria vesca HOM05D003624 ORTHO05D004188 6.1e-15 84.7 141 48.2
FAN06G1965 Fragaria x ananassa HOM05D003624 ORTHO05D004188 6.1e-15 84.7 141 48.2
FAN06G4942 Fragaria x ananassa HOM05D003624 ORTHO05D004188 6.1e-15 84.7 141 48.2
HanXRQChr08g0234751 Helianthus annuus HOM05D003624 ORTHO05D004188 6.1e-15 84.7 144 44.4
Aqoxy2G03154 Aquilegia oxysepala HOM05D003624 ORTHO05D004188 8.0e-15 84.3 144 39.6
EL10Ac2g04634 Beta vulgaris HOM05D003624 ORTHO05D004188 8.0e-15 84.3 146 40.4
Nitab4.5_0000578g0060 Nicotiana tabacum HOM05D003624 ORTHO05D004188 1.4e-14 83.6 144 41.0
FAN10G3681 Fragaria x ananassa HOM05D003624 ORTHO05D004188 5.2e-14 81.6 153 42.5
FAN01G2477 Fragaria x ananassa HOM05D003624 ORTHO05D004188 6.8e-14 81.3 141 42.6
AUR62031721 Chenopodium quinoa HOM05D003624 ORTHO05D004188 8.9e-14 80.9 148 42.6
Lsat_1_v5_gn_3_22041 Lactuca sativa HOM05D003624 ORTHO05D004188 2.0e-13 79.7 142 45.1
Aqoxy6G02821 Aquilegia oxysepala HOM05D003624 ORTHO05D004188 2.6e-13 79.3 142 38.0
arahy.Tifrunner.gnm1.ann1.Y1WZEQ Arachis hypogaea HOM05D003624 ORTHO05D004188 3.4e-13 79.0 93 72.0
Sp1g41070 Schrenkiella parvula HOM05D003624 ORTHO05D004188 7.5e-13 77.8 160 36.9
ECA247G0176 Erigeron canadensis HOM05D003624 ORTHO05D004188 9.8e-13 77.4 145 44.1
CSS0014624 Camellia sinensis var. sinensis HOM05D003624 ORTHO05D004188 1.3e-12 77.0 141 42.6
Duzib106G0342 Durio zibethinus HOM05D003624 ORTHO05D004188 1.7e-12 76.6 153 40.5
Thhalv10011527m.g Eutrema salsugineum HOM05D003624 ORTHO05D004188 2.2e-12 76.3 159 38.4
RcHm_v2.0_Chr4g0406621 Rosa chinensis HOM05D003624 ORTHO05D004188 2.2e-12 76.3 133 45.9
FAN03G2437 Fragaria x ananassa HOM05D003624 ORTHO05D004188 2.8e-12 75.9 141 53.9
ATR0691G007 Amborella trichopoda HOM05D003624 ORTHO05D004188 4.9e-12 75.1 142 39.4
Atru.chr4.2829 Acer truncatum HOM05D003624 ORTHO05D004188 6.3e-12 74.7 148 37.8
AUR62032608 Chenopodium quinoa HOM05D003624 ORTHO05D004188 6.3e-12 74.7 144 43.1
Ah.16g102270 Amaranthus hybridus HOM05D003624 ORTHO05D004188 8.3e-12 74.3 144 38.2
Psat2g013800 Pisum sativum HOM05D003624 ORTHO05D004188 1.1e-11 73.9 44 90.9
Ciclev10005088m.g Citrus clementina HOM05D003624 ORTHO05D004188 1.8e-11 73.2 151 37.7
Thecc.10G043100 Theobroma cacao HOM05D003624 ORTHO05D004188 1.8e-11 73.2 141 44.7
FAN01G1443 Fragaria x ananassa HOM05D003624 ORTHO05D004188 4.1e-11 72.0 141 53.2
Actinidia02952 Actinidia chinensis HOM05D003624 ORTHO05D004188 5.4e-11 71.6 96 50.0
COL.COLO4_34579 Corchorus olitorius HOM05D003624 ORTHO05D004188 5.4e-11 71.6 141 39.0
AL185U10020 Arabidopsis lyrata HOM05D003624 ORTHO05D004188 1.2e-10 70.5 143 35.0
Migut.B01491 Erythranthe guttata HOM05D003624 ORTHO05D004188 2.0e-10 69.7 145 40.7
PGSC0003DMG400023427 Solanum tuberosum HOM05D003624 ORTHO05D004188 2.0e-10 69.7 145 36.6
unitig_749.g13772 Utricularia gibba HOM05D003624 ORTHO05D004188 2.0e-10 69.7 144 40.3
ECA232G3640 Erigeron canadensis HOM05D003624 ORTHO05D004188 2.7e-10 69.3 143 41.3
Lj8P413T16 Lonicera japonica HOM05D003624 ORTHO05D004188 2.7e-10 69.3 129 41.9
Sopen05g032980 Solanum pennellii HOM05D003624 ORTHO05D004188 3.5e-10 68.9 145 35.9
Solyc05g054500.1 Solanum lycopersicum HOM05D003624 ORTHO05D004188 5.9e-10 68.2 145 35.2
HPP92_019187 Vanilla planifolia HOM05D003624 ORTHO05D004188 2.3e-09 66.2 155 36.1
C06p16060 Brassica napus HOM05D003624 ORTHO05D004188 6.6e-09 64.7 144 43.8
Pp3c24_1610 Physcomitrium patens HOM05D003624 ORTHO05D004188 8.6e-09 64.3 158 36.7
COL.COLO4_15033 Corchorus olitorius HOM05D003624 ORTHO05D004188 1.1e-08 63.9 77 53.2
CARHR218910 Cardamine hirsuta HOM05D003624 ORTHO05D004188 1.9e-08 63.2 89 39.3
BcaC08g44198 Brassica carinata HOM05D003624 ORTHO05D004188 2.5e-08 62.8 144 43.1
BolC6t36805H Brassica oleracea HOM05D003624 ORTHO05D004188 2.5e-08 62.8 144 43.1
arahy.Tifrunner.gnm1.ann1.00HL0A Arachis hypogaea HOM05D004850 ORTHO05D004353 3.3e-08 62.4 63 55.6
A05p17470 Brassica napus HOM05D003624 ORTHO05D004188 3.3e-08 62.4 146 44.5
BraA05t20642Z Brassica rapa HOM05D003624 ORTHO05D004188 3.3e-08 62.4 146 44.5
arahy.Tifrunner.gnm1.ann1.XXZT2J Arachis hypogaea HOM05D004850 ORTHO05D005971 5.6e-08 61.6 62 77.4
BcaB02g10822 Brassica carinata HOM05D003624 ORTHO05D004188 2.8e-07 59.3 142 45.1
Duzib106G1275 Durio zibethinus HOM05D003624 ORTHO05D004188 4.7e-07 58.5 77 50.6
AT5G51795 Arabidopsis thaliana HOM05D003624 ORTHO05D004188 6.1e-07 58.2 133 35.3
Rhsim05G0154000 Rhododendron simsii HOM05D003624 ORTHO05D004188 1.0e-06 57.4 89 42.7
Mapoly0087s0013 Marchantia polymorpha HOM05D003624 ORTHO05D004188 3.0e-06 55.8 156 34.0


User provided reference genes

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