Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06168_v3 Cicer arietinum L. HOM05D002112 ORTHO05D005830 1.6e-214 749.2 387 100.0
Ca_06185_v3 Cicer arietinum L. HOM05D002112 ORTHO05D005830 1.6e-214 749.2 387 100.0
Medtr5g088340 Medicago truncatula HOM05D002112 ORTHO05D005830 1.1e-186 656.8 380 89.2
TPR.G11324 Trifolium pratense HOM05D002112 ORTHO05D005830 2.0e-185 652.5 379 87.9
Psat2g021160 Pisum sativum HOM05D002112 ORTHO05D005830 2.5e-180 635.6 380 85.3
Lalb_Chr17g0347631 Lupinus albus HOM05D002112 ORTHO05D005830 3.1e-170 602.1 382 81.7
Lalb_Chr04g0249531 Lupinus albus HOM05D002112 ORTHO05D005830 7.9e-166 587.4 382 79.3
Lj6g0007258 Lotus japonicus HOM05D002112 ORTHO05D005830 1.8e-162 576.2 380 77.1
VMungo0540G0891 Vigna mungo HOM05D002112 ORTHO05D005830 9.4e-159 563.9 380 76.3
Ca_04336_v3 Cicer arietinum L. HOM05D002112 ORTHO05D005830 4.7e-158 561.6 380 77.1
Haze_01451 Corylus avellana HOM05D002112 ORTHO05D005830 5.2e-157 558.1 381 76.1
Glyma.20G048400 Glycine max HOM05D002112 ORTHO05D005830 3.3e-156 555.4 381 75.3
Atru.chr4.1269 Acer truncatum HOM05D002112 ORTHO05D005830 3.1e-154 548.9 380 74.7
Glyma.14G040300 Glycine max HOM05D002112 ORTHO05D005830 1.6e-153 546.6 381 73.2
arahy.Tifrunner.gnm1.ann1.PNXW1P Arachis hypogaea HOM05D002112 ORTHO05D005830 2.6e-153 545.8 372 78.2
arahy.Tifrunner.gnm1.ann1.9N9T88 Arachis hypogaea HOM05D002112 ORTHO05D005830 5.9e-153 544.7 372 78.0
Glyma.13G074600 Glycine max HOM05D002112 ORTHO05D005830 1.7e-152 543.1 381 73.2
CiPaw.01G095700 Carya illinoinensis HOM05D002112 ORTHO05D005830 2.9e-152 542.3 380 74.5
QL10p051275 Quercus lobata HOM05D002112 ORTHO05D005830 2.9e-152 542.3 380 74.7
Medtr3g040090 Medicago truncatula HOM05D002112 ORTHO05D005830 6.5e-152 541.2 383 74.4
Phvul.006G021000 Phaseolus vulgaris HOM05D002112 ORTHO05D005830 1.1e-151 540.4 380 73.2
GSVIVG01010853001 Vitis vinifera HOM05D002112 ORTHO05D005830 1.5e-151 540.0 380 72.4
Phvul.008G205800 Phaseolus vulgaris HOM05D002112 ORTHO05D005830 4.7e-150 535.0 382 74.6
VMungo0647G1998 Vigna mungo HOM05D002112 ORTHO05D005830 8.0e-150 534.3 379 74.9
Dinv17874 Davidia involucrata HOM05D002112 ORTHO05D005830 1.0e-149 533.9 380 74.2
Ciclev10020598m.g Citrus clementina HOM05D002112 ORTHO05D005830 5.2e-149 531.6 379 71.2
Duzib151G0469 Durio zibethinus HOM05D002112 ORTHO05D005830 9.7e-148 527.3 380 72.4
RcHm_v2.0_Chr2g0118821 Rosa chinensis HOM05D002112 ORTHO05D005830 6.3e-147 524.6 380 72.4
Lj2A342T117 Lonicera japonica HOM05D002112 ORTHO05D005830 8.2e-147 524.2 385 70.9
Thecc.04G174100 Theobroma cacao HOM05D002112 ORTHO05D005830 2.4e-146 522.7 380 71.8
TWI38G0996 Tripterygium wilfordii HOM05D002112 ORTHO05D005830 1.2e-145 520.4 382 70.7
TAR369G0031 Trochodendron aralioides HOM05D002112 ORTHO05D005830 1.6e-145 520.0 380 69.7
Gohir.A10G139900 Gossypium hirsutum HOM05D002112 ORTHO05D005830 2.0e-145 519.6 380 72.1
Gohir.D10G126900 Gossypium hirsutum HOM05D002112 ORTHO05D005830 2.0e-145 519.6 380 72.1
Manes.04G047300 Manihot esculenta HOM05D002112 ORTHO05D005830 3.5e-145 518.8 381 69.8
Actinidia22156 Actinidia chinensis HOM05D002112 ORTHO05D005830 5.9e-145 518.1 381 69.8
Prupe.1G198700 Prunus persica HOM05D002112 ORTHO05D005830 1.7e-144 516.5 372 72.8
Gorai.011G139800 Gossypium raimondii HOM05D002112 ORTHO05D005830 2.2e-144 516.2 380 71.8
CANSAT78G1637 Cannabis sativa HOM05D002112 ORTHO05D005830 1.1e-143 513.8 382 69.9
COL.COLO4_08219 Corchorus olitorius HOM05D002112 ORTHO05D005830 1.5e-143 513.5 380 71.8
MD04G1045800 Malus domestica HOM05D002112 ORTHO05D005830 1.5e-143 513.5 380 70.0
Nitab4.5_0000632g0010 Nicotiana tabacum HOM05D002112 ORTHO05D005830 1.9e-143 513.1 386 67.1
DCAR_007772 Daucus carota HOM05D002112 ORTHO05D005830 9.4e-143 510.8 382 71.2
HanXRQChr12g0380031 Helianthus annuus HOM05D002112 ORTHO05D005830 2.7e-142 509.2 387 69.3
Rhsim07G0082300 Rhododendron simsii HOM05D002112 ORTHO05D005830 1.8e-141 506.5 383 68.9
PGSC0003DMG400007324 Solanum tuberosum HOM05D002112 ORTHO05D005830 1.8e-141 506.5 388 65.7
Thhalv10020922m.g Eutrema salsugineum HOM05D002112 ORTHO05D005830 2.3e-141 506.1 381 69.0
HanXRQChr02g0033051 Helianthus annuus HOM05D002112 ORTHO05D005830 5.2e-141 505.0 372 69.9
Solyc02g082030.3 Solanum lycopersicum HOM05D002112 ORTHO05D005830 5.2e-141 505.0 386 65.0
Sopen02g026670 Solanum pennellii HOM05D002112 ORTHO05D005830 5.2e-141 505.0 386 65.0
Sc19g0002800 Simmondsia chinensis HOM05D002112 ORTHO05D005830 1.2e-140 503.8 382 67.5
vmacro13897 Vaccinium macrocarpon HOM05D002112 ORTHO05D005830 1.2e-140 503.8 384 69.0
QL11p031638 Quercus lobata HOM05D002112 ORTHO05D005830 2.6e-140 502.7 380 67.1
Potri.017G026100 Populus trichocarpa HOM05D002112 ORTHO05D005830 3.4e-140 502.3 382 68.8
Sabra17G0015800 Salix brachista HOM05D002112 ORTHO05D005830 4.4e-140 501.9 382 69.6
Sabra17G0000800 Salix brachista HOM05D002112 ORTHO05D005830 5.7e-140 501.5 382 69.4
THA.LOC104817851 Tarenaya hassleriana HOM05D002112 ORTHO05D005830 5.7e-140 501.5 386 68.1
Peaxi162Scf00036g02120 Petunia axillaris HOM05D002112 ORTHO05D005830 7.5e-140 501.1 384 66.9
FvH4_1g23450 Fragaria vesca HOM05D002112 ORTHO05D005830 9.8e-140 500.7 382 68.8
FAN19G2557 Fragaria x ananassa HOM05D002112 ORTHO05D005830 9.8e-140 500.7 382 68.8
Actinidia04201 Actinidia chinensis HOM05D002112 ORTHO05D005830 1.7e-139 500.0 413 64.9
Cc09_g04780 Coffea canephora HOM05D002112 ORTHO05D005830 2.8e-139 499.2 393 68.7
FAN26G0200 Fragaria x ananassa HOM05D002112 ORTHO05D005830 2.8e-139 499.2 382 68.8
ECA246G0582 Erigeron canadensis HOM05D002112 ORTHO05D005830 6.3e-139 498.0 320 77.5
Carub.0003s2027 Capsella rubella HOM05D002112 ORTHO05D005830 8.3e-139 497.7 381 68.5
FAN23G2661 Fragaria x ananassa HOM05D002112 ORTHO05D005830 2.4e-138 496.1 382 68.6
BcaC05g28317 Brassica carinata HOM05D002112 ORTHO05D005377 5.4e-138 495.0 380 67.1
BolC5t33124H Brassica oleracea HOM05D002112 ORTHO05D005830 5.4e-138 495.0 380 67.1
Sp3g18350 Schrenkiella parvula HOM05D002112 ORTHO05D005830 5.4e-138 495.0 381 67.5
CARHR095970 Cardamine hirsuta HOM05D002112 ORTHO05D005830 7.0e-138 494.6 383 67.4
C05p44010 Brassica napus HOM05D002112 ORTHO05D005377 1.2e-137 493.8 380 67.1
Sabra07G0106900 Salix brachista HOM05D002112 ORTHO05D005830 2.0e-137 493.0 382 68.8
Sabra07G0118800 Salix brachista HOM05D002112 ORTHO05D005830 2.0e-137 493.0 382 68.8
AL3G34040 Arabidopsis lyrata HOM05D002112 ORTHO05D005830 3.5e-137 492.3 381 67.7
A05p28600 Brassica napus HOM05D002112 ORTHO05D005377 5.9e-137 491.5 380 66.8
BraA05t21737Z Brassica rapa HOM05D002112 ORTHO05D005377 5.9e-137 491.5 380 66.8
Potri.007G131700 Populus trichocarpa HOM05D002112 ORTHO05D005830 5.9e-137 491.5 382 68.1
AUR62031652 Chenopodium quinoa HOM05D002112 ORTHO05D005830 1.0e-136 490.7 380 66.6
CAN.G809.29 Capsicum annuum HOM05D002112 ORTHO05D005830 2.9e-136 489.2 396 62.4
Migut.M02025 Erythranthe guttata HOM05D002112 ORTHO05D005830 1.9e-135 486.5 351 70.1
Eucgr.I00215 Eucalyptus grandis HOM05D002112 ORTHO05D005830 1.6e-134 483.4 339 72.3
Aa31LG8G7130 Aethionema arabicum HOM05D002112 ORTHO05D005830 6.1e-134 481.5 382 66.2
PSO339G3553 Papaver somniferum HOM05D002112 ORTHO05D005830 2.3e-133 479.6 375 66.7
BcaB04g20660 Brassica carinata HOM05D002112 ORTHO05D005830 3.0e-133 479.2 382 66.5
SalBow5G0693 Salvia bowleyana HOM05D002112 ORTHO05D005830 5.2e-133 478.4 387 66.7
BolC1t04335H Brassica oleracea HOM05D002112 ORTHO05D005377 6.8e-133 478.0 381 66.4
Aqoxy7G04120 Aquilegia oxysepala HOM05D002112 ORTHO05D005830 3.4e-132 475.7 388 64.2
MBI14_g20102_MAGBIO Magnolia biondii HOM05D002112 ORTHO05D005830 4.4e-132 475.3 380 63.4
BcaC09g48987 Brassica carinata HOM05D002112 ORTHO05D005377 5.7e-132 474.9 380 66.1
Nn2g10363 Nelumbo nucifera HOM05D002112 ORTHO05D005830 1.3e-131 473.8 347 68.9
Dinv21066 Davidia involucrata HOM05D002112 ORTHO05D005830 1.7e-131 473.4 383 67.4
CiPaw.06G167000 Carya illinoinensis HOM05D002112 ORTHO05D005830 4.9e-131 471.9 380 64.5
C01p43770 Brassica napus HOM05D002112 ORTHO05D005830 8.3e-131 471.1 380 65.3
DCAR_003742 Daucus carota HOM05D002112 ORTHO05D005830 4.5e-129 465.3 353 70.3
MELO3C015704.2 Cucumis melo HOM05D002112 ORTHO05D005830 7.8e-129 464.5 382 62.6
Peaxi162Scf00276g01115 Petunia axillaris HOM05D002112 ORTHO05D005830 2.9e-128 462.6 426 59.2
Nitab4.5_0003902g0080 Nicotiana tabacum HOM05D002112 ORTHO05D005830 7.3e-127 458.0 337 68.0
unitig_748.g7486 Utricularia gibba HOM05D002112 ORTHO05D005830 1.6e-126 456.8 343 66.8
ATR0559G336 Amborella trichopoda HOM05D002112 ORTHO05D005830 9.8e-124 447.6 351 64.7
Duzib212G0454 Durio zibethinus HOM05D002112 ORTHO05D005830 2.9e-123 446.0 380 63.9
EL10Ac2g03438 Beta vulgaris HOM05D002112 ORTHO05D005830 8.3e-123 444.5 380 61.8
SGA_v2.0_scaffold16G07839 Striga asiatica HOM05D002112 ORTHO05D005830 7.8e-121 438.0 455 53.4
Haze_10243 Corylus avellana HOM05D002112 ORTHO05D005830 8.6e-120 434.5 380 61.8
Ah.14g085620 Amaranthus hybridus HOM05D002112 ORTHO05D005830 3.3e-119 432.6 368 63.6
BraA01t03533Z Brassica rapa HOM05D002112 ORTHO05D005830 4.7e-118 428.7 381 62.5
Zm00001eb362140 Zea mays HOM05D002112 ORTHO05D005830 9.8e-116 421.0 336 62.2
Hma1.2p1_2907F.1_g330140 Hydrangea macrophylla HOM05D002112 ORTHO05D005830 3.7e-115 419.1 332 68.1
Gohir.A02G114100 Gossypium hirsutum HOM05D002112 ORTHO05D005830 4.1e-114 415.6 322 68.3
Lsat_1_v5_gn_3_102740 Lactuca sativa HOM05D002112 ORTHO05D005830 9.2e-114 414.5 379 60.4
Os01g0974000 Oryza sativa ssp. japonica HOM05D002112 ORTHO05D005830 9.2e-114 414.5 304 66.8
ClCG09G018870 Citrullus lanatus HOM05D002112 ORTHO05D005830 1.2e-113 414.1 324 65.1
CDE08G1601 Ceratophyllum demersum HOM05D002112 ORTHO05D005830 1.4e-109 400.6 384 55.5
SEGI_07155 Sequoiadendron giganteum HOM05D002112 ORTHO05D005830 4.0e-109 399.1 364 54.1
vmacro12410 Vaccinium macrocarpon HOM05D002112 ORTHO05D005830 1.5e-108 397.1 269 75.1
BcaB06g26098 Brassica carinata HOM05D002112 ORTHO05D005377 9.2e-106 387.9 323 62.8
Gohir.A08G075500 Gossypium hirsutum HOM05D002112 ORTHO05D005830 2.5e-103 379.8 283 70.3
Oeu010462.1 Olea europaea HOM05D002112 ORTHO05D005830 8.1e-102 374.8 290 68.6
ClCG02G003310 Citrullus lanatus HOM05D002112 ORTHO05D005830 4.0e-101 372.5 306 62.7
Sed0017575 Sechium edule HOM05D002112 ORTHO05D005830 1.1e-98 364.4 283 65.0
PSO151G0006 Papaver somniferum HOM05D002112 ORTHO05D005830 1.4e-98 364.0 374 54.0
Lj1A1151T82 Lonicera japonica HOM05D002112 ORTHO05D005830 1.9e-98 363.6 289 65.7
Mapoly0038s0049 Marchantia polymorpha HOM05D002112 ORTHO05D005830 1.9e-98 363.6 327 52.9
HPP92_018143 Vanilla planifolia HOM05D002112 ORTHO05D005830 5.4e-98 362.1 379 50.9
MSTRG.24953 Avicennia marina HOM05D002112 ORTHO05D005830 7.8e-97 358.2 279 66.7
CsaV3_7G002030 Cucumis sativus L. HOM05D002112 ORTHO05D005830 1.0e-96 357.8 284 63.7
Pp3c12_4060 Physcomitrium patens HOM05D002112 ORTHO05D005830 1.3e-96 357.5 341 52.2
Psat5g187680 Pisum sativum HOM05D002112 ORTHO05D005830 1.7e-96 357.1 285 68.8
MD13G1257900 Malus domestica HOM05D002112 ORTHO05D005830 1.5e-95 354.0 291 66.0
Pp3c3_12480 Physcomitrium patens HOM05D002112 ORTHO05D005830 3.3e-95 352.8 345 51.3
AT3G20320 Arabidopsis thaliana HOM05D002112 ORTHO05D005830 9.6e-95 351.3 282 65.2
SMO356G0377 Selaginella moellendorffii HOM05D002112 ORTHO05D005830 6.9e-93 345.1 308 54.9
A01p34360 Brassica napus HOM05D002112 ORTHO05D005830 1.7e-91 340.5 285 63.9
Cfa004646 Carpinus fangiana HOM05D002112 ORTHO05D005830 2.9e-91 339.7 322 58.7
CBR_g24153 Chara braunii HOM05D002112 ORTHO05D005830 2.1e-89 333.6 311 53.4
AagrBONN_evm.TU.Sc2ySwM_362.2463 Anthoceros agrestis HOM05D002112 ORTHO05D005830 3.9e-88 329.3 313 53.0
Hund03181 Selenicereus undatus HOM05D002112 ORTHO05D005830 2.1e-86 323.6 274 61.3
Zm00001eb139760 Zea mays HOM05D002112 ORTHO05D005830 2.8e-86 323.2 239 66.1
SHI29120 Sapria himalayana HOM05D002112 ORTHO05D005830 1.6e-81 307.4 350 48.9
TAR623G0168 Trochodendron aralioides HOM05D002112 ORTHO05D005830 1.1e-79 301.2 234 65.4
Peaxi162Scf00580g00069 Petunia axillaris HOM05D002112 ORTHO05D005830 1.6e-78 297.4 240 63.3
QL02p069440 Quercus lobata HOM05D002112 ORTHO05D005830 2.9e-75 286.6 203 68.5
MCO07G431 Micromonas commoda HOM05D002112 ORTHO05D005830 1.6e-70 270.8 307 45.3
PRCOL_00002736 Prasinoderma coloniale HOM05D002112 ORTHO05D005830 1.5e-63 247.7 300 43.0
Cre16.g694400 Chlamydomonas reinhardtii HOM05D002112 ORTHO05D005830 2.2e-62 243.8 300 43.0
Glyma.02G275800 Glycine max HOM05D002112 ORTHO05D005830 9.1e-53 211.8 175 66.3
Sc07g0004100 Simmondsia chinensis HOM05D002112 ORTHO05D005830 2.0e-47 194.1 176 59.1
Cpa.g.c39485 Carica papaya HOM05D002112 ORTHO05D005830 3.8e-43 179.9 127 70.1
TAR623G1172 Trochodendron aralioides HOM05D002112 ORTHO05D005830 1.9e-42 177.6 126 73.0
FAN28G2322 Fragaria x ananassa HOM05D002112 ORTHO05D005830 1.2e-36 158.3 102 79.4
Oeu010464.1 Olea europaea HOM05D002112 ORTHO05D005830 4.5e-36 156.4 101 79.2
Oeu037772.1 Olea europaea HOM05D002112 ORTHO05D005830 5.0e-35 152.9 100 77.0
Lj1A1151T83 Lonicera japonica HOM05D002112 ORTHO05D005830 1.5e-34 151.4 94 81.9
AUR62038882 Chenopodium quinoa HOM05D002112 ORTHO05D005830 1.2e-33 148.3 94 77.7
Gohir.A08G072300 Gossypium hirsutum HOM05D002112 ORTHO05D010805 5.0e-27 126.3 105 61.0
MD13G1258100 Malus domestica HOM05D002112 ORTHO05D005830 6.1e-25 119.4 77 76.6
A01p34370 Brassica napus HOM05D000233 ORTHO05D000020 3.3e-18 97.1 59 76.3
Peaxi162Scf00036g02121 Petunia axillaris HOM05D002112 ORTHO05D005830 4.0e-16 90.1 58 72.4
Cre09.g395028 Chlamydomonas reinhardtii HOM05D002112 ORTHO05D143200 5.9e-12 76.3 105 37.1
Sc09g0004030 Simmondsia chinensis HOM05D005136 ORTHO05D006619 7.8e-12 75.9 73 53.4
Sc07g0004110 Simmondsia chinensis HOM05D002112 ORTHO05D010805 1.9e-10 71.2 51 64.7
Hma1.2p1_1220F.1_g268110 Hydrangea macrophylla HOM05D002112 ORTHO05D005830 8.0e-09 65.9 42 83.3
Hma1.2p1_1220F.1_g268115 Hydrangea macrophylla HOM05D002112 ORTHO05D005830 8.0e-09 65.9 42 83.3
Hma1.2p1_2907F.1_g330145 Hydrangea macrophylla HOM05D002112 ORTHO05D005830 8.0e-09 65.9 42 83.3


User provided reference genes

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