Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05839_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 2.9e-67 258.5 133 100.0
Ca_05962_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 3.9e-64 248.1 130 98.5
Medtr5g077800 Medicago truncatula HOM05D006010 ORTHO05D007381 1.1e-58 229.9 130 90.0
Lj4g0009716 Lotus japonicus HOM05D006010 ORTHO05D007381 7.4e-55 217.2 128 87.5
Psat2g045640 Pisum sativum HOM05D006010 ORTHO05D007381 4.5e-52 208.0 131 86.3
Phvul.004G098200 Phaseolus vulgaris HOM05D006010 ORTHO05D007381 3.6e-49 198.4 134 79.9
Glyma.16G168300 Glycine max HOM05D006010 ORTHO05D007381 1.0e-48 196.8 134 79.1
Glyma.02G082600 Glycine max HOM05D006010 ORTHO05D007381 1.8e-45 186.0 134 76.9
Lalb_Chr10g0104261 Lupinus albus HOM05D006010 ORTHO05D007381 7.0e-45 184.1 132 76.5
arahy.Tifrunner.gnm1.ann1.RW4QB8 Arachis hypogaea HOM05D006010 ORTHO05D007381 3.5e-44 181.8 131 75.6
TPR.G23699 Trifolium pratense HOM05D005584 ORTHO05D006809 3.5e-44 181.8 101 90.1
arahy.Tifrunner.gnm1.ann1.14A9Q3 Arachis hypogaea HOM05D006010 ORTHO05D007381 4.5e-44 181.4 134 73.9
TPR.G23647 Trifolium pratense HOM05D006010 ORTHO05D007381 8.5e-43 177.2 101 88.1
arahy.Tifrunner.gnm1.ann1.ZG5C6W Arachis hypogaea HOM05D006010 ORTHO05D007381 2.5e-42 175.6 131 74.0
Cpa.g.sc116.81 Carica papaya HOM05D006010 ORTHO05D007381 2.0e-39 166.0 130 68.5
vmacro20589 Vaccinium macrocarpon HOM05D006010 ORTHO05D007381 2.6e-39 165.6 134 63.4
Rhsim10G0180400 Rhododendron simsii HOM05D006010 ORTHO05D007381 1.3e-38 163.3 134 62.7
CSS0039891 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 1.7e-38 162.9 134 67.2
Prupe.2G048000 Prunus persica HOM05D006010 ORTHO05D007381 2.2e-38 162.5 132 63.6
Cc02_g11480 Coffea canephora HOM05D006010 ORTHO05D007381 2.8e-38 162.2 134 64.9
TWI53G0527 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 3.7e-38 161.8 134 66.4
QL12p000853 Quercus lobata HOM05D006010 ORTHO05D007381 6.3e-38 161.0 133 68.4
Actinidia35721 Actinidia chinensis HOM05D006010 ORTHO05D007381 4.1e-37 158.3 134 64.2
Lj2A517G41 Lonicera japonica HOM05D006010 ORTHO05D007381 7.0e-37 157.5 131 64.1
GSVIVG01015997001 Vitis vinifera HOM05D006010 ORTHO05D007381 9.1e-37 157.1 132 65.9
Haze_14288 Corylus avellana HOM05D006010 ORTHO05D007381 2.6e-36 155.6 136 65.4
MD02G1273300 Malus domestica HOM05D006010 ORTHO05D007381 3.5e-36 155.2 132 62.1
HanXRQChr15g0482991 Helianthus annuus HOM05D006010 ORTHO05D007381 4.5e-36 154.8 131 64.1
CiPaw.03G074500 Carya illinoinensis HOM05D006010 ORTHO05D007381 7.7e-36 154.1 134 62.7
Sed0003139 Sechium edule HOM05D006010 ORTHO05D007381 2.9e-35 152.1 134 61.9
CsaV3_2G017210 Cucumis sativus L. HOM05D006010 ORTHO05D007381 5.0e-35 151.4 128 66.4
Cfa007784 Carpinus fangiana HOM05D006010 ORTHO05D007381 6.5e-35 151.0 136 63.2
Lsat_1_v5_gn_3_65880 Lactuca sativa HOM05D006010 ORTHO05D007381 6.5e-35 151.0 134 64.2
Sed0022983 Sechium edule HOM05D006010 ORTHO05D007381 6.5e-35 151.0 128 64.8
PGR004G1862 Punica granatum HOM05D006010 ORTHO05D007381 8.5e-35 150.6 136 64.7
MELO3C020924.2 Cucumis melo HOM05D006010 ORTHO05D007381 1.5e-34 149.8 125 66.4
Hma1.2p1_0249F.1_g102390 Hydrangea macrophylla HOM05D006010 ORTHO05D007381 2.5e-34 149.1 135 60.7
VMungo0464G0699 Vigna mungo HOM05D006010 ORTHO05D007381 2.5e-34 149.1 102 76.5
Migut.K00936 Erythranthe guttata HOM05D006010 ORTHO05D007381 2.7e-33 145.6 137 61.3
Atru.chr11.39 Acer truncatum HOM05D006010 ORTHO05D007381 6.1e-33 144.4 131 62.6
TAR623G0083 Trochodendron aralioides HOM05D006010 ORTHO05D007381 1.0e-32 143.7 144 56.9
Eucgr.F02881 Eucalyptus grandis HOM05D006010 ORTHO05D007381 4.0e-32 141.7 134 61.2
Potri.017G135500 Populus trichocarpa HOM05D006010 ORTHO05D007381 5.2e-32 141.4 132 60.6
FAN28G0351 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.5e-31 139.8 128 56.2
FAN28G1345 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.5e-31 139.8 128 56.2
RcHm_v2.0_Chr3g0492111 Rosa chinensis HOM05D006010 ORTHO05D007381 2.6e-31 139.0 132 56.8
Carub.0003s0196 Capsella rubella HOM05D006010 ORTHO05D007381 3.4e-31 138.7 129 58.1
FAN23G2851 Fragaria x ananassa HOM05D006010 ORTHO05D007381 5.7e-31 137.9 128 56.2
CAN.G222.64 Capsicum annuum HOM05D006010 ORTHO05D007381 7.5e-31 137.5 129 58.1
Solyc11g011490.2 Solanum lycopersicum HOM05D006010 ORTHO05D007381 1.7e-30 136.3 129 57.4
Sopen11g006280 Solanum pennellii HOM05D006010 ORTHO05D007381 2.2e-30 136.0 129 56.6
FAN19G0427 Fragaria x ananassa HOM05D006010 ORTHO05D007381 4.8e-30 134.8 130 57.7
Sp3g01890 Schrenkiella parvula HOM05D006010 ORTHO05D007381 4.8e-30 134.8 125 60.0
ClCG05G010670 Citrullus lanatus HOM05D006010 ORTHO05D007381 6.3e-30 134.4 131 56.5
PGSC0003DMG400013242 Solanum tuberosum HOM05D006010 ORTHO05D007381 6.3e-30 134.4 129 56.6
FvH4_1g30030 Fragaria vesca HOM05D006010 ORTHO05D007381 1.1e-29 133.7 130 56.9
Sabra17G0114300 Salix brachista HOM05D006010 ORTHO05D007381 1.1e-29 133.7 147 55.1
Peaxi162Scf00464g00430 Petunia axillaris HOM05D006010 ORTHO05D007381 1.8e-29 132.9 129 56.6
AL3G12280 Arabidopsis lyrata HOM05D006010 ORTHO05D007381 2.4e-29 132.5 129 58.9
Ciclev10026000m.g Citrus clementina HOM05D006010 ORTHO05D007381 2.4e-29 132.5 147 56.5
C09p75990 Brassica napus HOM05D006010 ORTHO05D007381 5.3e-29 131.3 123 60.2
BolC5t35058H Brassica oleracea HOM05D006010 ORTHO05D007381 5.3e-29 131.3 123 60.2
SalBow1G7757 Salvia bowleyana HOM05D006010 ORTHO05D007381 5.3e-29 131.3 133 57.9
Oeu048940.2 Olea europaea HOM05D006010 ORTHO05D007381 7.0e-29 131.0 164 51.8
THA.LOC104827184 Tarenaya hassleriana HOM05D006010 ORTHO05D007381 1.6e-28 129.8 130 56.9
ECA236G4224 Erigeron canadensis HOM05D006010 ORTHO05D007381 2.0e-28 129.4 131 55.0
Hund11982 Selenicereus undatus HOM05D006010 ORTHO05D007381 2.0e-28 129.4 129 58.1
MD07G1042200 Malus domestica HOM05D006010 ORTHO05D007381 2.7e-28 129.0 132 56.1
MSTRG.15654 Avicennia marina HOM05D006010 ORTHO05D007381 3.5e-28 128.6 131 54.2
A05p44250 Brassica napus HOM05D006010 ORTHO05D007381 3.5e-28 128.6 123 59.3
BraA06t23281Z Brassica rapa HOM05D000919 ORTHO05D004442 3.5e-28 128.6 123 59.3
AT3G02860 Arabidopsis thaliana HOM05D006010 ORTHO05D007381 4.5e-28 128.3 129 55.8
Sabra17G0111300 Salix brachista HOM05D006010 ORTHO05D007381 4.5e-28 128.3 148 55.4
Thecc.06G019600 Theobroma cacao HOM05D006010 ORTHO05D007381 5.9e-28 127.9 114 61.4
COL.COLO4_31121 Corchorus olitorius HOM05D006010 ORTHO05D007381 7.7e-28 127.5 113 62.8
Aa31LG5G13330 Aethionema arabicum HOM05D006010 ORTHO05D007381 1.0e-27 127.1 126 56.3
EL10Ac3g05516 Beta vulgaris HOM05D006010 ORTHO05D007381 1.0e-27 127.1 129 55.0
Thhalv10021193m.g Eutrema salsugineum HOM05D006010 ORTHO05D007381 1.3e-27 126.7 131 50.4
BcaC05g30500 Brassica carinata HOM05D000919 ORTHO05D004442 2.9e-27 125.6 77 79.2
CANSAT01G2297 Cannabis sativa HOM05D006010 ORTHO05D007381 2.9e-27 125.6 131 54.2
Nn3g17023 Nelumbo nucifera HOM05D006010 ORTHO05D007381 8.5e-27 124.0 136 56.6
Sc22g0001300 Simmondsia chinensis HOM05D006010 ORTHO05D007381 8.5e-27 124.0 135 54.1
Duzib235G0102 Durio zibethinus HOM05D006010 ORTHO05D007381 1.5e-26 123.2 130 55.4
Gohir.A10G157800 Gossypium hirsutum HOM05D006010 ORTHO05D007381 1.5e-26 123.2 86 70.9
Gohir.D10G083400 Gossypium hirsutum HOM05D006010 ORTHO05D007381 1.5e-26 123.2 86 70.9
Gorai.011G090700 Gossypium raimondii HOM05D006010 ORTHO05D007381 1.5e-26 123.2 86 70.9
AUR62039273 Chenopodium quinoa HOM05D006010 ORTHO05D007381 9.4e-26 120.6 131 51.9
AUR62016215 Chenopodium quinoa HOM05D006010 ORTHO05D007381 1.2e-25 120.2 130 53.1
SGA_v2.0_scaffold115G32097 Striga asiatica HOM05D006010 ORTHO05D007381 1.8e-24 116.3 125 56.8
CARHR076870 Cardamine hirsuta HOM05D006010 ORTHO05D007381 3.0e-24 115.5 131 51.1
Actinidia28796 Actinidia chinensis HOM05D006010 ORTHO05D007381 8.8e-24 114.0 107 56.1
CDE09G0547 Ceratophyllum demersum HOM05D006010 ORTHO05D007381 1.2e-23 113.6 132 47.0
Sed0023512 Sechium edule HOM05D006010 ORTHO05D007381 2.6e-23 112.5 68 77.9
Sed0018686 Sechium edule HOM05D006010 ORTHO05D007381 3.4e-23 112.1 65 80.0
Sed0026765 Sechium edule HOM05D006010 ORTHO05D007381 1.7e-22 109.8 134 49.3
unitig_0.g1692 Utricularia gibba HOM05D006010 ORTHO05D007381 2.8e-22 109.0 150 47.3
Glyma.14G212900 Glycine max HOM05D026408 ORTHO05D029776 2.4e-21 105.9 129 50.4
ATR0320G008 Amborella trichopoda HOM05D006010 ORTHO05D007381 3.1e-21 105.5 132 47.7
GSVIVG01016036001 Vitis vinifera HOM05D006010 ORTHO05D007381 5.4e-21 104.8 67 79.1
PSO017G1892 Papaver somniferum HOM05D006010 ORTHO05D007381 1.2e-20 103.6 125 51.2
PSO478G0898 Papaver somniferum HOM05D006010 ORTHO05D007381 1.2e-20 103.6 125 50.4
SEGI_17538 Sequoiadendron giganteum HOM05D006010 ORTHO05D007381 1.3e-19 100.1 128 46.9
Os05g0495100 Oryza sativa ssp. japonica HOM05D006010 ORTHO05D007381 1.1e-18 97.1 127 48.8
AagrBONN_evm.TU.Sc2ySwM_369.381 Anthoceros agrestis HOM05D006010 ORTHO05D007381 1.5e-18 96.7 135 44.4
Zm00001eb291600 Zea mays HOM05D006010 ORTHO05D007381 1.9e-18 96.3 125 47.2
DCAR_014157 Daucus carota HOM05D006010 ORTHO05D007381 9.5e-18 94.0 126 48.4
GSVIVG01015998001 Vitis vinifera HOM05D006010 ORTHO05D007381 1.0e-16 90.5 91 57.1
VMungo0647G0061 Vigna mungo HOM05D026408 ORTHO05D029776 3.0e-16 89.0 128 43.8
Mapoly0044s0136 Marchantia polymorpha HOM05D006010 ORTHO05D007381 2.0e-15 86.3 130 46.2
Phvul.008G238000 Phaseolus vulgaris HOM05D026408 ORTHO05D029776 2.6e-15 85.9 129 41.9
SHI30124 Sapria himalayana HOM05D006010 ORTHO05D007381 9.8e-15 84.0 118 43.2
Ah.05g176710 Amaranthus hybridus HOM05D006010 ORTHO05D007381 1.7e-14 83.2 192 33.3
FAN26G2228 Fragaria x ananassa HOM05D006010 ORTHO05D007381 2.3e-08 62.8 83 41.0
GSVIVG01016007001 Vitis vinifera HOM05D006010 ORTHO05D007381 2.9e-06 55.8 72 48.6


User provided reference genes

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