Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05837_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 1.9e-105 386.0 213 100.0
Ca_05962_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 2.6e-86 322.4 190 93.2
TPR.G23647 Trifolium pratense HOM05D006010 ORTHO05D007381 2.9e-77 292.4 190 85.3
Medtr5g077800 Medicago truncatula HOM05D006010 ORTHO05D007381 2.6e-70 269.2 189 82.0
Psat2g045640 Pisum sativum HOM05D006010 ORTHO05D007381 6.7e-66 254.6 194 79.4
arahy.Tifrunner.gnm1.ann1.14A9Q3 Arachis hypogaea HOM05D006010 ORTHO05D007381 1.4e-63 246.9 191 78.0
Lalb_Chr10g0104261 Lupinus albus HOM05D006010 ORTHO05D007381 2.0e-62 243.0 188 75.5
arahy.Tifrunner.gnm1.ann1.ZG5C6W Arachis hypogaea HOM05D006010 ORTHO05D007381 6.5e-61 238.0 184 78.3
arahy.Tifrunner.gnm1.ann1.RW4QB8 Arachis hypogaea HOM05D006010 ORTHO05D007381 8.5e-61 237.7 185 77.8
VMungo0464G0699 Vigna mungo HOM05D006010 ORTHO05D007381 1.1e-60 237.3 189 72.0
Phvul.004G098200 Phaseolus vulgaris HOM05D006010 ORTHO05D007381 7.9e-59 231.1 188 72.3
Lj4g0009716 Lotus japonicus HOM05D006010 ORTHO05D007381 1.0e-58 230.7 193 72.0
Glyma.02G082600 Glycine max HOM05D006010 ORTHO05D007381 4.0e-50 202.2 189 65.1
Glyma.16G168300 Glycine max HOM05D006010 ORTHO05D007381 2.4e-47 193.0 189 67.2
CiPaw.03G074500 Carya illinoinensis HOM05D006010 ORTHO05D007381 2.0e-46 189.9 194 59.8
Prupe.2G048000 Prunus persica HOM05D006010 ORTHO05D007381 4.2e-44 182.2 204 57.4
QL12p000853 Quercus lobata HOM05D006010 ORTHO05D007381 8.0e-43 177.9 196 57.1
Duzib235G0102 Durio zibethinus HOM05D006010 ORTHO05D007381 1.0e-42 177.6 205 58.5
FAN28G0351 Fragaria x ananassa HOM05D006010 ORTHO05D007381 3.0e-42 176.0 145 66.2
MD02G1273300 Malus domestica HOM05D006010 ORTHO05D007381 6.8e-42 174.9 175 59.4
FAN19G0427 Fragaria x ananassa HOM05D006010 ORTHO05D007381 8.8e-42 174.5 176 57.4
Cfa007784 Carpinus fangiana HOM05D006010 ORTHO05D007381 1.2e-41 174.1 166 66.9
FvH4_1g30030 Fragaria vesca HOM05D006010 ORTHO05D007381 3.4e-41 172.6 176 57.4
Haze_14288 Corylus avellana HOM05D006010 ORTHO05D007381 5.7e-41 171.8 166 66.3
Atru.chr11.39 Acer truncatum HOM05D006010 ORTHO05D007381 1.7e-40 170.2 191 57.1
MSTRG.15654 Avicennia marina HOM05D006010 ORTHO05D007381 2.2e-40 169.9 152 65.1
RcHm_v2.0_Chr3g0492111 Rosa chinensis HOM05D006010 ORTHO05D007381 2.8e-40 169.5 183 56.8
Manes.07G077600 Manihot esculenta HOM05D006010 ORTHO05D007381 4.8e-40 168.7 184 59.2
GSVIVG01015997001 Vitis vinifera HOM05D006010 ORTHO05D007381 8.3e-40 167.9 198 56.6
FAN26G2228 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.1e-39 167.5 145 64.8
Ciclev10026000m.g Citrus clementina HOM05D006010 ORTHO05D007381 1.8e-39 166.8 192 55.2
CsaV3_2G017210 Cucumis sativus L. HOM05D006010 ORTHO05D007381 1.8e-39 166.8 158 60.8
Potri.017G135500 Populus trichocarpa HOM05D006010 ORTHO05D007381 1.8e-39 166.8 139 71.9
CANSAT01G2297 Cannabis sativa HOM05D006010 ORTHO05D007381 2.4e-39 166.4 158 63.3
Peaxi162Scf00464g00430 Petunia axillaris HOM05D006010 ORTHO05D007381 2.4e-39 166.4 161 64.0
GSVIVG01016005001 Vitis vinifera HOM05D006010 ORTHO05D007381 3.1e-39 166.0 196 55.1
GSVIVG01016007001 Vitis vinifera HOM05D006010 ORTHO05D007381 3.1e-39 166.0 196 59.2
MELO3C020924.2 Cucumis melo HOM05D006010 ORTHO05D007381 5.4e-39 165.2 158 63.9
PGR004G1862 Punica granatum HOM05D006010 ORTHO05D007381 1.2e-38 164.1 161 59.6
Actinidia35721 Actinidia chinensis HOM05D006010 ORTHO05D007381 2.0e-38 163.3 145 64.8
Sabra17G0111300 Salix brachista HOM05D006010 ORTHO05D007381 2.7e-38 162.9 189 56.6
Sed0022983 Sechium edule HOM05D006010 ORTHO05D007381 3.5e-38 162.5 162 60.5
ClCG05G010670 Citrullus lanatus HOM05D006010 ORTHO05D007381 7.7e-38 161.4 183 55.2
Sabra17G0114300 Salix brachista HOM05D006010 ORTHO05D007381 7.7e-38 161.4 189 56.1
PGSC0003DMG400013242 Solanum tuberosum HOM05D006010 ORTHO05D007381 1.0e-37 161.0 161 64.6
TWI53G0527 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 2.9e-37 159.5 145 64.8
Eucgr.F02881 Eucalyptus grandis HOM05D006010 ORTHO05D007381 6.5e-37 158.3 193 57.0
SalBow1G7757 Salvia bowleyana HOM05D006010 ORTHO05D007381 2.5e-36 156.4 207 49.8
CAN.G222.64 Capsicum annuum HOM05D006010 ORTHO05D007381 5.5e-36 155.2 161 62.1
Sopen11g006280 Solanum pennellii HOM05D006010 ORTHO05D007381 7.2e-36 154.8 161 62.7
Hma1.2p1_0249F.1_g102390 Hydrangea macrophylla HOM05D006010 ORTHO05D007381 1.2e-35 154.1 202 53.5
Cc02_g11480 Coffea canephora HOM05D006010 ORTHO05D007381 1.6e-35 153.7 178 54.5
TWI74G0222 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 6.1e-35 151.8 172 55.2
Oeu048940.2 Olea europaea HOM05D006010 ORTHO05D007381 1.8e-34 150.2 152 61.8
EL10Ac3g05516 Beta vulgaris HOM05D006010 ORTHO05D007381 3.0e-34 149.4 181 52.5
FAN25G0538 Fragaria x ananassa HOM05D006010 ORTHO05D007381 4.0e-34 149.1 145 59.3
MD07G1042200 Malus domestica HOM05D006010 ORTHO05D007381 5.2e-34 148.7 193 52.3
Hund11982 Selenicereus undatus HOM05D006010 ORTHO05D007381 6.8e-34 148.3 138 65.9
Sed0003139 Sechium edule HOM05D006010 ORTHO05D007381 1.2e-33 147.5 158 57.6
GSVIVG01015998001 Vitis vinifera HOM05D006010 ORTHO05D007381 1.2e-33 147.5 165 58.2
FAN28G1345 Fragaria x ananassa HOM05D006010 ORTHO05D007381 3.4e-33 146.0 176 51.7
Cpa.g.sc116.81 Carica papaya HOM05D006010 ORTHO05D007381 9.8e-33 144.4 233 45.9
Actinidia28796 Actinidia chinensis HOM05D006010 ORTHO05D007381 1.3e-32 144.1 193 50.3
DCAR_014157 Daucus carota HOM05D006010 ORTHO05D007381 1.7e-32 143.7 162 60.5
Lsat_1_v5_gn_3_65880 Lactuca sativa HOM05D006010 ORTHO05D007381 1.7e-32 143.7 176 55.1
TPR.G23699 Trifolium pratense HOM05D005584 ORTHO05D006809 2.8e-32 142.9 90 82.2
ECA236G4224 Erigeron canadensis HOM05D006010 ORTHO05D007381 3.7e-32 142.5 179 50.8
Nn3g17023 Nelumbo nucifera HOM05D006010 ORTHO05D007381 3.7e-32 142.5 191 49.7
FAN23G2851 Fragaria x ananassa HOM05D006010 ORTHO05D007381 6.3e-32 141.7 145 56.6
SHI30126 Sapria himalayana HOM05D006010 ORTHO05D007381 2.4e-31 139.8 137 65.0
Rhsim10G0180400 Rhododendron simsii HOM05D006010 ORTHO05D007381 3.1e-31 139.4 195 48.2
TPR.G36575 Trifolium pratense HOM05D006010 ORTHO05D007381 3.1e-31 139.4 87 81.6
Sed0026765 Sechium edule HOM05D006010 ORTHO05D007381 1.6e-30 137.1 161 54.0
Migut.K00936 Erythranthe guttata HOM05D006010 ORTHO05D007381 2.0e-30 136.7 172 52.9
ATR0320G006 Amborella trichopoda HOM05D006010 ORTHO05D007381 3.5e-30 136.0 192 52.1
unitig_0.g1692 Utricularia gibba HOM05D006010 ORTHO05D007381 5.9e-30 135.2 177 50.8
THA.LOC104827184 Tarenaya hassleriana HOM05D006010 ORTHO05D007381 2.3e-29 133.3 239 44.8
AUR62016215 Chenopodium quinoa HOM05D006010 ORTHO05D007381 3.8e-29 132.5 154 57.8
CDE09G0547 Ceratophyllum demersum HOM05D006010 ORTHO05D007381 1.2e-27 127.5 226 41.6
Thecc.06G019600 Theobroma cacao HOM05D006010 ORTHO05D007381 1.6e-27 127.1 239 44.4
HanXRQChr15g0482991 Helianthus annuus HOM05D006010 ORTHO05D007381 4.7e-27 125.6 164 55.5
Ah.05g176710 Amaranthus hybridus HOM05D006010 ORTHO05D007381 1.4e-26 124.0 183 48.6
Solyc11g011490.2 Solanum lycopersicum HOM05D006010 ORTHO05D007381 1.7e-24 117.1 108 64.8
AUR62039273 Chenopodium quinoa HOM05D006010 ORTHO05D007381 2.9e-24 116.3 157 49.0
Os05g0495100 Oryza sativa ssp. japonica HOM05D006010 ORTHO05D007381 4.9e-24 115.5 199 44.7
Zm00001eb291600 Zea mays HOM05D006010 ORTHO05D007381 4.9e-24 115.5 136 57.4
Aqoxy3G00232 Aquilegia oxysepala HOM05D006010 ORTHO05D007381 1.4e-23 114.0 125 60.8
COL.COLO4_31121 Corchorus olitorius HOM05D006010 ORTHO05D007381 1.4e-23 114.0 108 70.4
CSS0001849 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 4.1e-23 112.5 111 63.1
CSS0044569 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 4.1e-23 112.5 111 63.1
Sc22g0001300 Simmondsia chinensis HOM05D006010 ORTHO05D007381 5.4e-23 112.1 140 50.7
Lj2A517G40 Lonicera japonica HOM05D006010 ORTHO05D007381 4.6e-22 109.0 104 62.5
TAR623G0083 Trochodendron aralioides HOM05D006010 ORTHO05D007381 1.9e-20 103.6 177 44.1
SGA_v2.0_scaffold115G32097 Striga asiatica HOM05D006010 ORTHO05D007381 2.5e-20 103.2 200 45.0
Sp3g01890 Schrenkiella parvula HOM05D006010 ORTHO05D007381 7.3e-20 101.7 199 42.7
BcaC05g30500 Brassica carinata HOM05D000919 ORTHO05D004442 2.1e-19 100.1 161 49.1
Gohir.A10G157800 Gossypium hirsutum HOM05D006010 ORTHO05D007381 3.6e-19 99.4 109 66.1
Nitab4.5_0011135g0050 Nicotiana tabacum HOM05D006010 ORTHO05D007381 8.0e-19 98.2 141 46.8
vmacro20589 Vaccinium macrocarpon HOM05D006010 ORTHO05D007381 3.1e-18 96.3 176 42.0
Gorai.011G090700 Gossypium raimondii HOM05D006010 ORTHO05D007381 7.5e-17 91.7 111 62.2
Gohir.D10G083400 Gossypium hirsutum HOM05D006010 ORTHO05D007381 2.9e-16 89.7 113 61.1
AagrBONN_evm.TU.Sc2ySwM_369.381 Anthoceros agrestis HOM05D006010 ORTHO05D007381 1.1e-15 87.8 144 45.8
FAN21G0982 Fragaria x ananassa HOM05D006010 ORTHO05D007381 3.2e-15 86.3 137 40.1
Thhalv10021193m.g Eutrema salsugineum HOM05D006010 ORTHO05D007381 1.2e-14 84.3 127 44.1
AT3G02860 Arabidopsis thaliana HOM05D006010 ORTHO05D007381 1.6e-14 84.0 96 54.2
Aa31LG5G13330 Aethionema arabicum HOM05D006010 ORTHO05D007381 3.5e-14 82.8 118 47.5
C09p75990 Brassica napus HOM05D006010 ORTHO05D007381 3.5e-14 82.8 157 40.1
BolC5t35058H Brassica oleracea HOM05D006010 ORTHO05D007381 3.5e-14 82.8 157 40.1
CARHR076870 Cardamine hirsuta HOM05D006010 ORTHO05D007381 3.5e-14 82.8 149 39.6
Carub.0003s0196 Capsella rubella HOM05D006010 ORTHO05D007381 1.0e-13 81.3 155 38.7
AL3G12280 Arabidopsis lyrata HOM05D006010 ORTHO05D007381 2.3e-13 80.1 95 52.6
Pp3c12_7630 Physcomitrium patens HOM05D006010 ORTHO05D007381 1.1e-12 77.8 161 38.5
A05p44250 Brassica napus HOM05D006010 ORTHO05D007381 1.5e-12 77.4 156 37.2
BraA06t23281Z Brassica rapa HOM05D000919 ORTHO05D004442 1.5e-12 77.4 156 37.2
PSO017G1892 Papaver somniferum HOM05D006010 ORTHO05D007381 1.2e-11 74.3 57 68.4
PSO478G0898 Papaver somniferum HOM05D006010 ORTHO05D007381 1.2e-11 74.3 57 68.4
Mapoly0044s0136 Marchantia polymorpha HOM05D006010 ORTHO05D007381 4.0e-10 69.3 188 36.7
CSS0015748 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 4.1e-07 59.3 90 46.7
CSS0044039 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 4.1e-07 59.3 90 46.7


User provided reference genes

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