Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04600_v3 Cicer arietinum L. HOM05D004873 ORTHO05D006122 0.0e+00 1431.0 915 100.0
Medtr5g034430 Medicago truncatula HOM05D004873 ORTHO05D006122 0.0e+00 1144.8 893 78.9
TPR.G13590 Trifolium pratense HOM05D004873 ORTHO05D006122 0.0e+00 1099.7 876 79.0
Psat2g106600 Pisum sativum HOM05D004873 ORTHO05D006122 5.3e-277 958.0 780 79.9
Glyma.01G031400 Glycine max HOM05D004873 ORTHO05D006122 1.6e-257 893.3 967 63.9
VMungo1215G2983 Vigna mungo HOM05D004873 ORTHO05D006122 1.6e-249 866.7 981 63.6
arahy.Tifrunner.gnm1.ann1.SJZ9IC Arachis hypogaea HOM05D004873 ORTHO05D006122 6.3e-238 828.2 973 62.2
arahy.Tifrunner.gnm1.ann1.QGK7DH Arachis hypogaea HOM05D004873 ORTHO05D006122 4.1e-237 825.5 1003 60.9
Lj2g0008447 Lotus japonicus HOM05D004873 ORTHO05D006122 3.2e-234 815.8 893 64.7
Phvul.002G071900 Phaseolus vulgaris HOM05D004873 ORTHO05D006122 1.7e-230 803.5 787 70.0
Lalb_Chr16g0392411 Lupinus albus HOM05D004873 ORTHO05D006122 3.2e-226 789.3 774 69.0
Glyma.02G034300 Glycine max HOM05D004873 ORTHO05D006122 5.6e-218 761.9 776 66.4
Lalb_Chr05g0228131 Lupinus albus HOM05D004873 ORTHO05D006122 8.6e-203 711.4 775 64.4
Duzib251G0436 Durio zibethinus HOM05D004873 ORTHO05D006122 4.9e-198 695.7 913 55.9
Atru.chr11.2013 Acer truncatum HOM05D004873 ORTHO05D006122 1.6e-193 680.6 913 54.9
RcHm_v2.0_Chr4g0443951 Rosa chinensis HOM05D004873 ORTHO05D006122 1.8e-192 677.2 910 54.1
TWI75G0297 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 3.4e-191 672.9 912 57.1
Duzib248G0479 Durio zibethinus HOM05D004873 ORTHO05D006122 2.2e-190 670.2 901 53.7
Ciclev10030647m.g Citrus clementina HOM05D004873 ORTHO05D006122 2.9e-190 669.8 898 57.6
COL.COLO4_36971 Corchorus olitorius HOM05D004873 ORTHO05D006122 2.9e-190 669.8 810 53.6
TWI18G0605 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 1.3e-187 661.0 895 54.2
Nn4g22808 Nelumbo nucifera HOM05D004873 ORTHO05D006122 5.1e-187 659.1 1000 51.2
CiPaw.05G150500 Carya illinoinensis HOM05D004873 ORTHO05D006122 2.1e-185 653.7 922 54.6
GSVIVG01020233001 Vitis vinifera HOM05D004873 ORTHO05D006122 3.8e-182 642.9 838 55.3
TAR622G0484 Trochodendron aralioides HOM05D004873 ORTHO05D006122 6.0e-180 635.6 936 55.1
Haze_12170 Corylus avellana HOM05D004873 ORTHO05D006122 2.3e-179 633.6 961 51.8
Dinv24864 Davidia involucrata HOM05D004873 ORTHO05D006122 8.7e-179 631.7 798 56.0
QL03p061438 Quercus lobata HOM05D004873 ORTHO05D006122 1.5e-178 630.9 784 60.6
TWI36G0907 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 8.1e-177 625.2 898 55.3
CSS0025142 Camellia sinensis var. sinensis HOM05D004873 ORTHO05D006122 1.8e-176 624.0 906 56.0
TAR374G0217 Trochodendron aralioides HOM05D004873 ORTHO05D006122 6.9e-176 622.1 937 54.2
Lalb_Chr05g0216921 Lupinus albus HOM05D004873 ORTHO05D006122 2.6e-175 620.2 733 53.3
MELO3C012001.2 Cucumis melo HOM05D004873 ORTHO05D006122 7.1e-173 612.1 1019 49.1
Hma1.2p1_0160F.1_g070740 Hydrangea macrophylla HOM05D004873 ORTHO05D006122 9.3e-173 611.7 906 50.7
Manes.13G031000 Manihot esculenta HOM05D004873 ORTHO05D006122 4.6e-172 609.4 781 57.7
FvH4_4g34571 Fragaria vesca HOM05D004873 ORTHO05D006122 3.0e-171 606.7 909 51.3
CANSAT01G1467 Cannabis sativa HOM05D004873 ORTHO05D006122 5.1e-171 605.9 920 52.9
FAN22G1569 Fragaria x ananassa HOM05D004873 ORTHO05D006122 3.3e-170 603.2 913 51.2
Potri.008G147100 Populus trichocarpa HOM05D004873 ORTHO05D006122 3.3e-170 603.2 798 55.6
Aqoxy3G02990_Aqoxy3G02991 Aquilegia oxysepala HOM05D004873 ORTHO05D006122 9.6e-170 601.7 929 53.3
Cfa009139 Carpinus fangiana HOM05D004873 ORTHO05D006122 3.1e-168 596.7 948 51.1
MBI15_g36943_MAGBIO Magnolia biondii HOM05D004873 ORTHO05D006122 3.1e-168 596.7 918 54.0
Eucgr.B03347 Eucalyptus grandis HOM05D004873 ORTHO05D006122 5.3e-168 595.9 895 50.7
FAN12G3868 Fragaria x ananassa HOM05D004873 ORTHO05D006122 5.3e-168 595.9 911 50.9
Sabra10G0067000 Salix brachista HOM05D004873 ORTHO05D006122 3.8e-166 589.7 943 53.7
Gohir.D02G163000 Gossypium hirsutum HOM05D004873 ORTHO05D006122 4.9e-166 589.3 797 54.5
Potri.010G094700 Populus trichocarpa HOM05D004873 ORTHO05D006122 6.4e-166 589.0 914 56.1
ClCG05G025280 Citrullus lanatus HOM05D004873 ORTHO05D006122 2.4e-165 587.0 1087 47.2
MD16G1091700 Malus domestica HOM05D004873 ORTHO05D006122 6.7e-163 578.9 781 58.3
MD13G1091200 Malus domestica HOM05D004873 ORTHO05D006122 1.8e-160 570.9 781 55.3
Gorai.005G183000 Gossypium raimondii HOM05D004873 ORTHO05D006122 6.9e-160 568.9 907 50.7
Dinv15307 Davidia involucrata HOM05D004873 ORTHO05D006122 1.0e-158 565.1 782 56.8
Sed0006362 Sechium edule HOM05D004873 ORTHO05D006122 2.5e-157 560.5 794 52.0
Prupe.1G254700 Prunus persica HOM05D004873 ORTHO05D006122 3.2e-157 560.1 781 57.0
FAN07G2437 Fragaria x ananassa HOM05D004873 ORTHO05D006122 1.6e-156 557.8 781 52.9
vmacro01183 Vaccinium macrocarpon HOM05D004873 ORTHO05D006122 2.1e-156 557.4 920 52.3
FAN17G2310 Fragaria x ananassa HOM05D004873 ORTHO05D006122 6.0e-156 555.8 902 49.8
PGSC0003DMG400030977 Solanum tuberosum HOM05D004873 ORTHO05D006122 7.9e-156 555.4 908 52.1
Actinidia01706 Actinidia chinensis HOM05D004873 ORTHO05D006122 1.0e-155 555.1 918 48.7
Cc11_g14610 Coffea canephora HOM05D004873 ORTHO05D006122 1.0e-155 555.1 923 49.6
Rhsim12G0047400 Rhododendron simsii HOM05D004873 ORTHO05D006122 6.7e-155 552.4 941 49.7
Cpa.g.sc69.19 Carica papaya HOM05D004873 ORTHO05D006122 5.7e-154 549.3 850 49.4
DCAR_026543 Daucus carota HOM05D004873 ORTHO05D006122 7.4e-154 548.9 942 46.7
PSO063G1237 Papaver somniferum HOM05D004873 ORTHO05D006122 2.2e-153 547.4 932 52.7
Gohir.A03G140300 Gossypium hirsutum HOM05D004873 ORTHO05D006122 4.8e-153 546.2 780 54.6
Sopen05g001620 Solanum pennellii HOM05D004873 ORTHO05D006122 6.3e-153 545.8 908 51.1
Lj6A805G39 Lonicera japonica HOM05D004873 ORTHO05D006122 8.2e-153 545.4 963 48.8
Oeu055452.2 Olea europaea HOM05D004873 ORTHO05D006122 1.2e-151 541.6 973 45.5
CAN.G376.10 Capsicum annuum HOM05D004873 ORTHO05D006122 4.5e-151 539.7 830 52.2
CsaV3_5G031610 Cucumis sativus L. HOM05D004873 ORTHO05D006122 7.2e-149 532.3 785 52.6
Peaxi162Scf00338g00218 Petunia axillaris HOM05D004873 ORTHO05D006122 1.6e-148 531.2 946 47.6
ECA199G0004 Erigeron canadensis HOM05D004873 ORTHO05D006122 3.9e-147 526.6 918 48.6
HPP92_019184 Vanilla planifolia HOM05D004873 ORTHO05D006122 1.1e-146 525.0 923 46.3
DCAR_024143 Daucus carota HOM05D004873 ORTHO05D006122 1.3e-145 521.5 917 47.3
Hma1.2p1_0867F.1_g230230 Hydrangea macrophylla HOM05D004873 ORTHO05D006122 4.8e-145 519.6 826 49.2
PSO832G2005 Papaver somniferum HOM05D004873 ORTHO05D006122 8.2e-145 518.8 938 50.3
PGR102G2017 Punica granatum HOM05D004873 ORTHO05D006122 1.2e-143 515.0 883 48.9
Carub.0002s0504 Capsella rubella HOM05D004873 ORTHO05D006122 5.0e-142 509.6 920 48.9
Nitab4.5_0000113g0270 Nicotiana tabacum HOM05D004873 ORTHO05D006122 6.5e-142 509.2 876 45.2
SGA_v2.0_scaffold165G38251 Striga asiatica HOM05D004873 ORTHO05D006122 3.2e-141 506.9 929 44.7
BcaC06g31808 Brassica carinata HOM05D004873 ORTHO05D006122 1.6e-140 504.6 912 50.0
Migut.L01408 Erythranthe guttata HOM05D004873 ORTHO05D006122 1.8e-139 501.1 898 50.6
AL2G16455 Arabidopsis lyrata HOM05D004873 ORTHO05D006122 3.9e-139 500.0 925 48.8
BraA01t02979Z Brassica rapa HOM05D004873 ORTHO05D006122 3.9e-139 500.0 897 47.4
C01p36930 Brassica napus HOM05D004873 ORTHO05D006122 5.1e-139 499.6 892 46.2
Sp2g04470 Schrenkiella parvula HOM05D004873 ORTHO05D006122 2.6e-138 497.3 906 49.6
A01p29150 Brassica napus HOM05D004873 ORTHO05D006122 3.3e-138 496.9 897 47.0
BolC1t03651H Brassica oleracea HOM05D004873 ORTHO05D006122 5.7e-138 496.1 903 47.8
Lsat_1_v5_gn_4_6981 Lactuca sativa HOM05D004873 ORTHO05D006122 2.4e-136 490.7 934 47.9
ATR0691G293 Amborella trichopoda HOM05D004873 ORTHO05D006122 4.1e-136 490.0 916 49.3
Thecc.02G248000 Theobroma cacao HOM05D004873 ORTHO05D006122 5.3e-136 489.6 792 50.8
Sc11g0001220 Simmondsia chinensis HOM05D004873 ORTHO05D006122 7.0e-136 489.2 768 52.3
AUR62005371 Chenopodium quinoa HOM05D004873 ORTHO05D006122 1.0e-134 485.3 778 47.4
BcaC09g49418 Brassica carinata HOM05D004873 ORTHO05D006122 1.7e-134 484.6 885 45.9
CARHR052750 Cardamine hirsuta HOM05D004873 ORTHO05D006122 1.9e-133 481.1 791 48.9
HanXRQChr12g0383471 Helianthus annuus HOM05D004873 ORTHO05D006122 1.9e-133 481.1 926 49.2
MSTRG.7893 Avicennia marina HOM05D004873 ORTHO05D006122 3.3e-130 470.3 764 49.1
C04p26690 Brassica napus HOM05D004873 ORTHO05D006122 4.4e-130 469.9 918 44.7
BolC4t24137H Brassica oleracea HOM05D004873 ORTHO05D006122 4.4e-130 469.9 918 44.7
THA.LOC104819547 Tarenaya hassleriana HOM05D004873 ORTHO05D006122 4.1e-128 463.4 866 48.0
BcaC02g10690 Brassica carinata HOM05D004873 ORTHO05D006122 1.6e-127 461.5 938 43.8
BcaB04g20256 Brassica carinata HOM05D004873 ORTHO05D006122 1.1e-125 455.3 888 46.7
EL10Ac6g13668 Beta vulgaris HOM05D004873 ORTHO05D006122 5.5e-125 453.0 794 51.3
Aa31LG2G10110 Aethionema arabicum HOM05D004873 ORTHO05D006122 1.2e-124 451.8 937 45.8
Thhalv10023242m.g Eutrema salsugineum HOM05D004873 ORTHO05D006122 2.1e-124 451.1 899 47.4
HPP92_019185 Vanilla planifolia HOM05D004873 ORTHO05D006122 1.0e-123 448.7 923 42.8
THA.LOC104819514 Tarenaya hassleriana HOM05D004873 ORTHO05D006122 1.8e-123 448.0 939 45.8
AT1G60200 Arabidopsis thaliana HOM05D004873 ORTHO05D006122 2.0e-122 444.5 775 51.9
unitig_27.g25195 Utricularia gibba HOM05D004873 ORTHO05D006122 8.2e-121 439.1 918 44.3
Hund05991 Selenicereus undatus HOM05D004873 ORTHO05D006122 8.5e-118 429.1 867 48.3
AUR62014033 Chenopodium quinoa HOM05D004873 ORTHO05D006122 7.2e-117 426.0 772 47.4
Zm00001eb042420 Zea mays HOM05D004873 ORTHO05D006122 1.6e-111 408.3 788 46.8
SEGI_30430 Sequoiadendron giganteum HOM05D004873 ORTHO05D006122 1.5e-106 391.7 948 42.6
Ah.03g132650 Amaranthus hybridus HOM05D004873 ORTHO05D006122 2.1e-100 371.3 953 41.4
TAR629G1177 Trochodendron aralioides HOM05D004873 ORTHO05D006122 2.8e-100 370.9 860 37.7
Pp3c25_3310 Physcomitrium patens HOM05D004873 ORTHO05D006122 2.2e-97 361.3 904 41.6
Mapoly0148s0032 Marchantia polymorpha HOM05D004873 ORTHO05D006122 4.3e-93 347.1 836 43.3
Zm00001eb179020 Zea mays HOM05D004873 ORTHO05D006122 5.8e-90 336.7 784 45.9
Pp3c16_19090 Physcomitrium patens HOM05D004873 ORTHO05D006122 3.0e-86 324.3 824 43.8
Nitab4.5_0010954g0010 Nicotiana tabacum HOM05D004873 ORTHO05D006122 1.5e-85 322.0 290 62.4
C05p51270 Brassica napus HOM05D004873 ORTHO05D006122 5.6e-85 320.1 581 48.7
Solyc05g005620.4 Solanum lycopersicum HOM05D004873 ORTHO05D006122 3.4e-82 310.8 329 58.7
Oeu056734.1 Olea europaea HOM05D004873 ORTHO05D006122 1.2e-79 302.4 698 40.5
Actinidia08168 Actinidia chinensis HOM05D004873 ORTHO05D006122 4.0e-75 287.3 705 43.0
FvH4_4g34570 Fragaria vesca HOM05D004873 ORTHO05D006122 5.6e-61 240.4 288 53.1
SMO117G0118 Selaginella moellendorffii HOM05D004873 ORTHO05D006122 7.3e-61 240.0 818 36.6
CDE01G0488 Ceratophyllum demersum HOM05D004873 ORTHO05D006122 9.6e-61 239.6 237 62.0
PSO675G2898 Papaver somniferum HOM05D004873 ORTHO05D006122 5.3e-59 233.8 389 42.7
FAN12G0889 Fragaria x ananassa HOM05D004873 ORTHO05D006122 9.9e-58 229.6 270 54.1
Os08g0416400 Oryza sativa ssp. japonica HOM05D004873 ORTHO05D006122 1.1e-51 209.5 411 43.1
CDE02G2726 Ceratophyllum demersum HOM05D004873 ORTHO05D006122 2.2e-49 201.8 248 54.0
CDE01G0278 Ceratophyllum demersum HOM05D004873 ORTHO05D006122 5.5e-48 197.2 443 39.7
CBR_g45271 Chara braunii HOM05D000019 ORTHO05D000002 3.3e-45 188.0 284 49.3
CDE02G2297 Ceratophyllum demersum HOM05D001801 ORTHO05D001739 1.3e-41 176.0 160 57.5
SHI27198 Sapria himalayana HOM05D004873 ORTHO05D006122 1.4e-30 139.4 131 61.1
Medtr5g034435 Medicago truncatula HOM05D004873 ORTHO05D006122 2.4e-27 128.6 73 89.0
Aqoxy1G03520 Aquilegia oxysepala HOM05D004873 ORTHO05D006122 1.1e-24 119.8 71 83.1
Cre08.g375084 Chlamydomonas reinhardtii HOM05D004873 ORTHO05D006122 9.4e-16 90.1 166 38.0
PRCOL_00005912 Prasinoderma coloniale HOM05D004873 ORTHO05D006122 3.6e-15 88.2 110 41.8
SMO119G0006 Selaginella moellendorffii HOM05D004873 ORTHO05D006122 5.7e-13 80.9 125 42.4
PSO017G6017 Papaver somniferum HOM05D004873 ORTHO05D006122 4.8e-12 77.8 147 34.0
Lsat_1_v5_gn_5_2020 Lactuca sativa HOM05D004873 ORTHO05D026408 1.1e-11 76.6 135 39.3
Lsat_1_v5_gn_6_33360 Lactuca sativa HOM05D004873 ORTHO05D026408 2.4e-11 75.5 134 39.6
MCO16G428 Micromonas commoda HOM05D004873 ORTHO05D006122 5.3e-11 74.3 683 25.2
PSO339G1217 Papaver somniferum HOM05D004873 ORTHO05D006122 2.0e-10 72.4 115 34.8
Lalb_Chr05g0216911 Lupinus albus HOM05D004873 ORTHO05D036519 3.8e-09 68.2 97 52.6
Actinidia27784 Actinidia chinensis HOM05D004873 ORTHO05D026408 5.0e-09 67.8 174 36.2
ECA247G0578 Erigeron canadensis HOM05D004873 ORTHO05D006122 1.1e-08 66.6 101 42.6
MD16G1091800 Malus domestica HOM05D057391 ORTHO05D036519 4.2e-08 64.7 123 45.5
arahy.Tifrunner.gnm1.ann1.Q2B5NH Arachis hypogaea HOM05D000069 ORTHO05D007590 9.4e-08 63.5 107 43.9
FAN22G0459 Fragaria x ananassa HOM05D004873 ORTHO05D006122 1.4e-06 59.7 87 47.1
MD13G1091400 Malus domestica HOM05D057391 ORTHO05D036519 8.8e-06 57.0 130 41.5


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