Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04206_v3 Cicer arietinum L. HOM05D003353 ORTHO05D003751 4.2e-102 374.8 202 100.0
Medtr6g007650 Medicago truncatula HOM05D003353 ORTHO05D003751 3.3e-62 242.3 172 72.7
Psat1g059480 Pisum sativum HOM05D003353 ORTHO05D003751 4.9e-58 228.4 180 76.1
Lj2g0012220 Lotus japonicus HOM05D003353 ORTHO05D003751 1.0e-55 220.7 179 71.5
Glyma.13G170000 Glycine max HOM05D003353 ORTHO05D003751 9.2e-49 197.6 174 62.1
VMungo0464G0255 Vigna mungo HOM05D003353 ORTHO05D003751 3.5e-48 195.7 188 62.8
Glyma.19G010200 Glycine max HOM05D003353 ORTHO05D003751 2.5e-46 189.5 178 58.4
Phvul.004G017600 Phaseolus vulgaris HOM05D003353 ORTHO05D003751 1.6e-45 186.8 177 61.6
arahy.Tifrunner.gnm1.ann1.S45US4 Arachis hypogaea HOM05D003353 ORTHO05D003751 6.8e-44 181.4 186 58.6
MD09G1035200 Malus domestica HOM05D003353 ORTHO05D003751 2.7e-40 169.5 165 55.8
MD17G1035500 Malus domestica HOM05D003353 ORTHO05D003751 1.0e-39 167.5 165 55.2
Lalb_Chr06g0176091 Lupinus albus HOM05D003353 ORTHO05D003751 1.1e-38 164.1 178 51.1
Prupe.3G283100 Prunus persica HOM05D003353 ORTHO05D003751 1.1e-38 164.1 174 53.4
Lalb_Chr02g0160231 Lupinus albus HOM05D003353 ORTHO05D003751 2.0e-35 153.3 147 53.1
FAN02G2799 Fragaria x ananassa HOM05D003353 ORTHO05D003751 7.6e-35 151.4 154 54.5
FAN05G2549 Fragaria x ananassa HOM05D003353 ORTHO05D003751 2.2e-34 149.8 150 55.3
TPR.G2281 Trifolium pratense HOM05D003353 ORTHO05D003751 2.2e-34 149.8 182 53.8
Cpa.g.sc215.7 Carica papaya HOM05D003353 ORTHO05D003751 2.9e-34 149.4 163 50.3
CsaV3_3G042270 Cucumis sativus L. HOM05D003353 ORTHO05D003751 2.9e-34 149.4 205 45.9
FvH4_6g50560 Fragaria vesca HOM05D003353 ORTHO05D003751 2.9e-34 149.4 148 56.1
FAN14G4206 Fragaria x ananassa HOM05D003353 ORTHO05D003751 1.4e-33 147.1 148 55.4
FAN09G2719 Fragaria x ananassa HOM05D003353 ORTHO05D022659 2.4e-33 146.4 149 55.0
FAN09G4608 Fragaria x ananassa HOM05D003353 ORTHO05D003751 2.4e-33 146.4 149 55.0
Lalb_Chr21g0319411 Lupinus albus HOM05D003353 ORTHO05D003751 2.4e-33 146.4 140 54.3
Haze_14661 Corylus avellana HOM05D003353 ORTHO05D003751 3.2e-33 146.0 139 58.3
ClCG10G014330 Citrullus lanatus HOM05D003353 ORTHO05D003751 4.2e-33 145.6 205 44.4
MELO3C009946.2 Cucumis melo HOM05D003353 ORTHO05D003751 5.4e-33 145.2 170 50.0
Cfa007435 Carpinus fangiana HOM05D003353 ORTHO05D003751 1.2e-32 144.1 139 59.0
COL.COLO4_28936 Corchorus olitorius HOM05D003353 ORTHO05D003751 1.2e-32 144.1 155 56.8
Thecc.04G008000 Theobroma cacao HOM05D003353 ORTHO05D003751 3.5e-32 142.5 175 51.4
CiPaw.04G024200 Carya illinoinensis HOM05D003353 ORTHO05D003751 6.0e-32 141.7 144 53.5
CANSAT64G0328 Cannabis sativa HOM05D003353 ORTHO05D003751 1.3e-31 140.6 153 51.0
Potri.017G072580 Populus trichocarpa HOM05D003353 ORTHO05D003751 2.3e-31 139.8 144 52.8
CiPaw.03G037100 Carya illinoinensis HOM05D003353 ORTHO05D003751 3.0e-31 139.4 144 54.2
Sabra17G0060500 Salix brachista HOM05D003353 ORTHO05D003751 1.5e-30 137.1 144 51.4
Gorai.006G029600 Gossypium raimondii HOM05D003353 ORTHO05D003751 1.9e-30 136.7 153 51.6
QL02p076799 Quercus lobata HOM05D003353 ORTHO05D003751 3.3e-30 136.0 145 51.7
Gohir.D09G025300 Gossypium hirsutum HOM05D003353 ORTHO05D003751 5.6e-30 135.2 153 51.6
Manes.15G182800 Manihot esculenta HOM05D003353 ORTHO05D003751 9.6e-30 134.4 164 46.3
TWI12G0214 Tripterygium wilfordii HOM05D003353 ORTHO05D003751 1.8e-28 130.2 178 47.2
SHI25555 Sapria himalayana HOM05D003353 ORTHO05D003751 6.9e-28 128.3 140 50.7
Duzib147G1510 Durio zibethinus HOM05D003353 ORTHO05D003751 3.4e-27 125.9 184 45.1
GSVIVG01032492001 Vitis vinifera HOM05D003353 ORTHO05D003751 5.8e-27 125.2 150 50.0
Gohir.A09G026000 Gossypium hirsutum HOM05D003353 ORTHO05D003751 9.9e-27 124.4 153 49.0
Sed0022584 Sechium edule HOM05D003353 ORTHO05D003751 9.9e-27 124.4 136 52.9
BcaB04g21418 Brassica carinata HOM05D003353 ORTHO05D003751 1.7e-26 123.6 208 38.5
TWI36G0997 Tripterygium wilfordii HOM05D003353 ORTHO05D003751 1.7e-26 123.6 167 45.5
C09p75140 Brassica napus HOM05D003353 ORTHO05D003751 1.4e-25 120.6 189 41.3
THA.LOC104822384 Tarenaya hassleriana HOM05D003353 ORTHO05D003751 1.4e-25 120.6 185 40.0
BNapus_Darmor_BZH_scaffold_133p00020 Brassica napus HOM05D003353 ORTHO05D003751 5.4e-25 118.6 180 41.1
BraA01t04666Z Brassica rapa HOM05D003353 ORTHO05D003751 5.4e-25 118.6 180 41.1
BolC5t35150H Brassica oleracea HOM05D003353 ORTHO05D003751 1.6e-24 117.1 189 40.7
Nn3g16906 Nelumbo nucifera HOM05D003353 ORTHO05D003751 1.6e-24 117.1 157 44.6
BcaC09g47659 Brassica carinata HOM05D003353 ORTHO05D003751 2.7e-24 116.3 180 40.6
BolC1t05958H Brassica oleracea HOM05D003353 ORTHO05D003751 2.7e-24 116.3 180 40.6
AL3G10710 Arabidopsis lyrata HOM05D003353 ORTHO05D003751 4.6e-24 115.5 183 40.4
Carub.0003s0064 Capsella rubella HOM05D003353 ORTHO05D003751 4.6e-24 115.5 168 41.1
Thhalv10022520m.g Eutrema salsugineum HOM05D003353 ORTHO05D003751 4.6e-24 115.5 193 39.4
Aa31LG5G10560 Aethionema arabicum HOM05D003353 ORTHO05D003751 6.0e-24 115.2 169 42.0
Thhalv10019872m.g Eutrema salsugineum HOM05D003353 ORTHO05D003751 1.0e-23 114.4 193 38.9
Hund12469 Selenicereus undatus HOM05D003353 ORTHO05D003751 2.3e-23 113.2 150 46.0
AT3G01460 Arabidopsis thaliana HOM05D003353 ORTHO05D003751 3.9e-23 112.5 168 40.5
Sc06g0001600 Simmondsia chinensis HOM05D003353 ORTHO05D003751 3.9e-23 112.5 153 43.1
PGR142G1415 Punica granatum HOM05D003353 ORTHO05D003751 5.1e-23 112.1 137 46.7
A05p44550 Brassica napus HOM05D003353 ORTHO05D003751 6.7e-23 111.7 189 39.7
Sp3g00610 Schrenkiella parvula HOM05D003353 ORTHO05D003751 8.7e-23 111.3 170 41.2
Dinv35052 Davidia involucrata HOM05D003353 ORTHO05D003751 4.3e-22 109.0 161 41.6
BraA05t23202Z Brassica rapa HOM05D003353 ORTHO05D003751 5.6e-22 108.6 160 41.2
EL10Ac2g03352 Beta vulgaris HOM05D003353 ORTHO05D003751 2.1e-21 106.7 159 41.5
TAR371G0580 Trochodendron aralioides HOM05D003353 ORTHO05D003751 6.2e-21 105.1 154 43.5
TAR629G0276 Trochodendron aralioides HOM05D003353 ORTHO05D003751 8.1e-21 104.8 158 43.0
Rhsim10G0023100 Rhododendron simsii HOM05D003353 ORTHO05D003751 1.1e-20 104.4 132 43.2
Nn4g22812 Nelumbo nucifera HOM05D003353 ORTHO05D003751 5.3e-20 102.1 154 42.9
Hma1.2p1_0802F.1_g220460 Hydrangea macrophylla HOM05D003353 ORTHO05D003751 2.0e-19 100.1 174 46.0
Atru.chr6.2192 Acer truncatum HOM05D003353 ORTHO05D003751 7.6e-19 98.2 146 42.5
Lj7C591T5 Lonicera japonica HOM05D003353 ORTHO05D003751 1.7e-18 97.1 160 39.4
CDE10G0339 Ceratophyllum demersum HOM05D003353 ORTHO05D003751 2.5e-17 93.2 143 38.5
Aqoxy3G02993 Aquilegia oxysepala HOM05D003353 ORTHO05D003751 3.2e-17 92.8 156 39.7
Carub.0001s0468 Capsella rubella HOM05D003353 ORTHO05D003751 3.2e-17 92.8 90 51.1
ATR0691G050 Amborella trichopoda HOM05D003353 ORTHO05D003751 7.1e-17 91.7 164 35.4
PSO063G6215 Papaver somniferum HOM05D003353 ORTHO05D003751 7.1e-17 91.7 165 38.2
PSO832G1186 Papaver somniferum HOM05D003353 ORTHO05D003751 4.6e-16 89.0 161 37.3
Lalb_Chr02g0160031 Lupinus albus HOM05D003353 ORTHO05D003751 1.9e-14 83.6 46 78.3
RcHm_v2.0_Chr2g0171081 Rosa chinensis HOM05D003353 ORTHO05D003751 2.5e-14 83.2 49 77.6
AUR62042408 Chenopodium quinoa HOM05D003353 ORTHO05D003751 3.7e-13 79.3 122 42.6
AUR62032109 Chenopodium quinoa HOM05D003353 ORTHO05D003751 8.2e-13 78.2 118 42.4
HPP92_008854 Vanilla planifolia HOM05D003353 ORTHO05D003751 3.1e-12 76.3 166 33.1
DCAR_021679 Daucus carota HOM05D003353 ORTHO05D003751 1.7e-10 70.5 160 33.8
Os02g0192300 Oryza sativa ssp. japonica HOM05D003353 ORTHO05D003751 2.5e-09 66.6 116 36.2
Dinv24865 Davidia involucrata HOM05D003353 ORTHO05D003751 4.6e-08 62.4 133 37.6
Dinv15308 Davidia involucrata HOM05D003353 ORTHO05D003751 3.0e-07 59.7 147 32.7
SEGI_35053 Sequoiadendron giganteum HOM05D003353 ORTHO05D003751 8.7e-07 58.2 102 33.3
Lsat_1_v5_gn_8_157680 Lactuca sativa HOM05D003353 ORTHO05D003751 4.3e-06 55.8 85 37.6


User provided reference genes

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