Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03150_v3 Cicer arietinum L. HOM05D006564 ORTHO05D007772 5.4e-119 431.0 218 100.0
Psat2g104680 Pisum sativum HOM05D006564 ORTHO05D007772 1.5e-100 369.8 217 86.6
Medtr5g034180 Medicago truncatula HOM05D006564 ORTHO05D007772 1.9e-100 369.4 230 83.5
TPR.G21085 Trifolium pratense HOM05D006564 ORTHO05D007772 1.6e-99 366.3 238 79.8
Lj2g0026051 Lotus japonicus HOM05D006564 ORTHO05D007772 1.2e-83 313.5 224 73.7
Glyma.01G029900 Glycine max HOM05D006564 ORTHO05D007772 8.9e-82 307.4 221 73.8
VMungo1215G0480 Vigna mungo HOM05D006564 ORTHO05D007772 9.9e-81 303.9 216 71.8
Phvul.002G070600 Phaseolus vulgaris HOM05D006564 ORTHO05D007772 2.3e-77 292.7 239 65.3
arahy.Tifrunner.gnm1.ann1.T8BVJ1 Arachis hypogaea HOM05D006564 ORTHO05D007772 4.7e-75 285.0 222 68.5
arahy.Tifrunner.gnm1.ann1.FI0FWQ Arachis hypogaea HOM05D006564 ORTHO05D007772 5.3e-66 255.0 205 67.8
Cfa009164 Carpinus fangiana HOM05D006564 ORTHO05D007772 1.9e-63 246.5 217 60.4
QL03p059806 Quercus lobata HOM05D006564 ORTHO05D007772 4.2e-63 245.4 230 59.6
CANSAT01G1831 Cannabis sativa HOM05D006564 ORTHO05D007772 1.6e-62 243.4 224 58.0
Prupe.1G251700 Prunus persica HOM05D006564 ORTHO05D007772 1.6e-62 243.4 219 57.5
MD16G1094900 Malus domestica HOM05D006564 ORTHO05D007772 1.1e-60 237.3 224 54.9
Dinv24837 Davidia involucrata HOM05D006564 ORTHO05D007772 3.3e-60 235.7 194 62.4
Atru.chr11.2047 Acer truncatum HOM05D006564 ORTHO05D007772 2.4e-58 229.6 206 57.3
Hma1.2p1_0536F.1_g173940 Hydrangea macrophylla HOM05D006564 ORTHO05D007772 1.5e-57 226.9 209 57.9
FvH4_4g34230 Fragaria vesca HOM05D006564 ORTHO05D007772 9.9e-57 224.2 195 59.5
Rhsim12G0044200 Rhododendron simsii HOM05D006564 ORTHO05D007772 1.4e-55 220.3 221 52.9
Ciclev10033458m.g Citrus clementina HOM05D006564 ORTHO05D007772 4.2e-55 218.8 223 53.4
Potri.010G041900 Populus trichocarpa HOM05D006564 ORTHO05D007772 5.5e-55 218.4 214 53.7
TAR622G0653 Trochodendron aralioides HOM05D006564 ORTHO05D007772 1.0e-53 214.2 211 55.9
GSVIVG01013762001 Vitis vinifera HOM05D006564 ORTHO05D007772 5.1e-53 211.8 201 58.7
PGR119G0202 Punica granatum HOM05D006564 ORTHO05D007772 9.6e-52 207.6 218 53.2
Manes.13G029100 Manihot esculenta HOM05D006564 ORTHO05D007772 1.6e-51 206.8 206 54.4
Haze_12197 Corylus avellana HOM05D006564 ORTHO05D007772 2.8e-51 206.1 207 56.0
Hund06003 Selenicereus undatus HOM05D006564 ORTHO05D007772 4.8e-51 205.3 231 48.1
Gorai.010G099700 Gossypium raimondii HOM05D006564 ORTHO05D007772 6.2e-51 204.9 217 52.5
TWI75G0104 Tripterygium wilfordii HOM05D006564 ORTHO05D007772 1.8e-50 203.4 210 53.8
Glyma.02G035501 Glycine max HOM05D006564 ORTHO05D007772 2.2e-48 196.4 144 68.1
Gohir.A06G086900 Gossypium hirsutum HOM05D006564 ORTHO05D007772 3.8e-48 195.7 200 54.5
Gohir.D06G086400 Gossypium hirsutum HOM05D006564 ORTHO05D007772 1.4e-47 193.7 206 52.9
Sp2g04270 Schrenkiella parvula HOM05D006564 ORTHO05D007772 4.2e-47 192.2 209 50.2
SGA_v2.0_scaffold276G46631 Striga asiatica HOM05D006564 ORTHO05D007772 9.3e-47 191.0 221 48.0
Lsat_1_v5_gn_4_5380 Lactuca sativa HOM05D006564 ORTHO05D007772 1.2e-46 190.7 219 48.9
Nitab4.5_0004611g0020 Nicotiana tabacum HOM05D006564 ORTHO05D007772 1.6e-46 190.3 214 50.9
Sabra10G0025500 Salix brachista HOM05D006564 ORTHO05D007772 4.6e-46 188.7 235 45.1
Aqoxy3G02914 Aquilegia oxysepala HOM05D006564 ORTHO05D007772 7.9e-46 188.0 218 47.7
Thhalv10023451m.g Eutrema salsugineum HOM05D006564 ORTHO05D007772 7.9e-46 188.0 194 52.6
Solyc06g065620.2 Solanum lycopersicum HOM05D006564 ORTHO05D007772 1.0e-45 187.6 214 49.1
CARHR052570 Cardamine hirsuta HOM05D006564 ORTHO05D007772 5.1e-45 185.3 207 49.8
Migut.E00581 Erythranthe guttata HOM05D006564 ORTHO05D007772 1.1e-44 184.1 213 48.4
THA.LOC104827560 Tarenaya hassleriana HOM05D006564 ORTHO05D007772 2.5e-44 183.0 192 51.6
PSO832G2728 Papaver somniferum HOM05D006564 ORTHO05D007772 7.4e-44 181.4 220 46.4
EL10Ac6g13691 Beta vulgaris HOM05D006564 ORTHO05D007772 9.6e-44 181.0 218 44.5
COL.COLO4_24191 Corchorus olitorius HOM05D006564 ORTHO05D007772 9.6e-44 181.0 188 52.1
AT1G60460 Arabidopsis thaliana HOM05D006564 ORTHO05D007772 1.3e-43 180.6 216 46.3
Carub.0002s0487 Capsella rubella HOM05D006564 ORTHO05D007772 2.8e-43 179.5 205 48.3
A01p29270 Brassica napus HOM05D006564 ORTHO05D007772 3.7e-43 179.1 206 47.6
PSO063G0329 Papaver somniferum HOM05D006564 ORTHO05D007772 4.8e-43 178.7 201 50.2
Nn3g16844 Nelumbo nucifera HOM05D006564 ORTHO05D007772 8.2e-43 177.9 219 47.9
BraA01t03060Z Brassica rapa HOM05D006564 ORTHO05D007772 1.1e-42 177.6 192 49.5
SalBow1G6981 Salvia bowleyana HOM05D006564 ORTHO05D007772 1.1e-42 177.6 188 51.6
BolC1t03666H Brassica oleracea HOM05D006564 ORTHO05D007772 1.4e-42 177.2 206 47.6
Lalb_Chr05g0216811 Lupinus albus HOM05D006564 ORTHO05D007772 1.8e-42 176.8 118 78.0
Aa31LG2G9990 Aethionema arabicum HOM05D006564 ORTHO05D007772 2.4e-42 176.4 207 45.9
BcaB04g20267 Brassica carinata HOM05D006564 ORTHO05D007772 4.1e-42 175.6 206 49.0
MELO3C010665.2 Cucumis melo HOM05D006564 ORTHO05D007772 4.1e-42 175.6 210 46.7
Sed0020482 Sechium edule HOM05D006564 ORTHO05D007772 6.9e-42 174.9 217 43.3
Cc11_g15240 Coffea canephora HOM05D006564 ORTHO05D007772 9.0e-42 174.5 209 48.3
AL2G16230 Arabidopsis lyrata HOM05D006564 ORTHO05D007772 1.5e-41 173.7 206 47.1
BcaC09g49405 Brassica carinata HOM05D006564 ORTHO05D007772 1.5e-41 173.7 206 46.6
MBI16_g27088_MAGBIO Magnolia biondii HOM05D006564 ORTHO05D007772 1.5e-41 173.7 242 46.3
ClCG08G017970 Citrullus lanatus HOM05D006564 ORTHO05D007772 3.4e-41 172.6 210 45.7
C01p37040 Brassica napus HOM05D006564 ORTHO05D007772 7.6e-41 171.4 206 46.1
CsaV3_2G024630 Cucumis sativus L. HOM05D006564 ORTHO05D007772 7.6e-41 171.4 214 45.3
ECA234G3669 Erigeron canadensis HOM05D006564 ORTHO05D007772 1.7e-40 170.2 246 43.9
unitig_744.g23977 Utricularia gibba HOM05D006564 ORTHO05D007772 5.0e-40 168.7 198 48.0
Peaxi162Scf00075g02124 Petunia axillaris HOM05D006564 ORTHO05D007772 2.1e-38 163.3 205 47.3
Zm00001eb227420 Zea mays HOM05D006564 ORTHO05D007772 2.7e-38 162.9 208 45.7
Nitab4.5_0003128g0060 Nicotiana tabacum HOM05D006564 ORTHO05D007772 5.1e-37 158.7 192 47.9
Oeu056406.1 Olea europaea HOM05D006564 ORTHO05D007772 5.3e-34 148.7 198 47.0
CiPaw.05G152600 Carya illinoinensis HOM05D006564 ORTHO05D007772 6.1e-30 135.2 125 53.6
Lj3A1053T43 Lonicera japonica HOM05D006564 ORTHO05D007772 7.9e-30 134.8 134 53.7
ATR1091G047 Amborella trichopoda HOM05D006564 ORTHO05D007772 3.0e-29 132.9 175 45.1
FAN07G0775 Fragaria x ananassa HOM05D006564 ORTHO05D007772 1.1e-28 131.0 217 41.9
RcHm_v2.0_Chr4g0443681 Rosa chinensis HOM05D006564 ORTHO05D007772 2.6e-28 129.8 135 54.1
Sc04g0009220 Simmondsia chinensis HOM05D006564 ORTHO05D007772 7.4e-28 128.3 147 48.3
FAN22G1362 Fragaria x ananassa HOM05D006564 ORTHO05D007772 2.2e-27 126.7 135 55.6
TAR374G1125 Trochodendron aralioides HOM05D006564 ORTHO05D007772 3.7e-27 125.9 119 53.8
AUR62014056 Chenopodium quinoa HOM05D006564 ORTHO05D007772 1.1e-26 124.4 142 49.3
FAN12G0482 Fragaria x ananassa HOM05D006564 ORTHO05D007772 2.4e-26 123.2 108 61.1
Lalb_Chr05g0216821 Lupinus albus HOM05D006564 ORTHO05D007772 4.1e-26 122.5 73 72.6
AUR62005394 Chenopodium quinoa HOM05D006564 ORTHO05D007772 6.9e-26 121.7 136 50.0
PGSC0003DMG401026086 Solanum tuberosum HOM05D006564 ORTHO05D007772 6.9e-26 121.7 132 52.3
ClCG08G018020 Citrullus lanatus HOM05D006564 ORTHO05D007772 2.9e-24 116.3 132 45.5
FAN17G1546 Fragaria x ananassa HOM05D006564 ORTHO05D007772 1.2e-22 110.9 71 67.6
Eucgr.H02586 Eucalyptus grandis HOM05D006564 ORTHO05D007772 2.1e-22 110.2 117 53.0
RcHm_v2.0_Chr4g0443691 Rosa chinensis HOM05D006564 ORTHO05D007772 4.7e-22 109.0 71 69.0
Actinidia01700 Actinidia chinensis HOM05D006564 ORTHO05D007772 9.7e-20 101.3 131 43.5
Migut.E00617 Erythranthe guttata HOM05D006564 ORTHO05D007772 2.8e-19 99.8 71 59.2
Lj3A1053G47 Lonicera japonica HOM05D006564 ORTHO05D007772 8.2e-19 98.2 70 62.9
Thecc.02G252200 Theobroma cacao HOM05D006564 ORTHO05D007772 5.3e-18 95.5 71 57.7
Actinidia01701 Actinidia chinensis HOM05D006564 ORTHO05D007772 7.0e-18 95.1 70 62.9
CDE06G0043 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 1.3e-16 90.9 90 55.6
HanXRQChr12g0383581 Helianthus annuus HOM05D006564 ORTHO05D007772 1.6e-14 84.0 72 55.6
SHI17558 Sapria himalayana HOM05D006564 ORTHO05D007772 4.0e-13 79.3 69 56.5
Sopen06g024060 Solanum pennellii HOM05D006564 ORTHO05D007772 4.0e-13 79.3 72 48.6
SEGI_36736 Sequoiadendron giganteum HOM05D006564 ORTHO05D007772 7.5e-12 75.1 121 34.7
Pp3c7_26620 Physcomitrium patens HOM05D006564 ORTHO05D007772 9.1e-10 68.2 165 28.5
CDE07G0681 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 2.7e-09 66.6 153 32.0
HPP92_021828 Vanilla planifolia HOM05D006564 ORTHO05D007772 2.2e-08 63.5 100 37.0


User provided reference genes

Program Settings