Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01036_v3 Cicer arietinum L. HOM05D001993 ORTHO05D014738 3.2e-66 255.0 133 100.0
Ca_01033_v3 Cicer arietinum L. HOM05D001993 ORTHO05D004040 1.2e-41 173.3 154 65.6
Ca_30253_v3 Cicer arietinum L. HOM05D001993 ORTHO05D004040 1.2e-41 173.3 154 65.6
Psat5g304040 Pisum sativum HOM05D001993 ORTHO05D004040 2.8e-38 162.2 154 60.4
TPR.G16048 Trifolium pratense HOM05D001993 ORTHO05D004040 2.8e-38 162.2 153 60.8
Medtr2g104610 Medicago truncatula HOM05D001993 ORTHO05D004040 8.2e-38 160.6 152 60.5
TPR.G19151 Trifolium pratense HOM05D001993 ORTHO05D004040 8.2e-38 160.6 152 61.2
Lj3g0004208 Lotus japonicus HOM05D001993 ORTHO05D004040 2.1e-33 146.0 154 56.5
Lalb_Chr24g0395371 Lupinus albus HOM05D001993 ORTHO05D004040 3.6e-33 145.2 152 57.2
Phvul.005G181600 Phaseolus vulgaris HOM05D001993 ORTHO05D004040 1.0e-32 143.7 154 55.8
Lalb_Chr14g0373941 Lupinus albus HOM05D001993 ORTHO05D004040 1.4e-32 143.3 152 57.2
arahy.Tifrunner.gnm1.ann1.MFGQ7M Arachis hypogaea HOM05D001993 ORTHO05D004040 2.6e-31 139.0 151 53.6
arahy.Tifrunner.gnm1.ann1.S9NP0T Arachis hypogaea HOM05D001993 ORTHO05D004040 2.6e-31 139.0 151 53.6
VMungo1080G0486 Vigna mungo HOM05D001993 ORTHO05D004040 5.7e-31 137.9 155 54.2
Glyma.11G079000 Glycine max HOM05D001993 ORTHO05D004040 2.2e-30 136.0 152 52.6
Glyma.13G367900 Glycine max HOM05D001993 ORTHO05D004040 2.2e-30 136.0 152 52.6
Glyma.15G005400 Glycine max HOM05D001993 ORTHO05D004040 1.4e-29 133.3 154 51.3
Hund00508 Selenicereus undatus HOM05D001993 ORTHO05D004040 2.4e-29 132.5 152 50.7
Zm00001eb076030 Zea mays HOM05D001993 ORTHO05D004040 3.1e-29 132.1 152 52.6
Lsat_1_v5_gn_8_105360 Lactuca sativa HOM05D001993 ORTHO05D004040 5.3e-29 131.3 152 52.0
Zm00001eb434270 Zea mays HOM05D001993 ORTHO05D004040 1.6e-28 129.8 152 52.0
TAR625G0460 Trochodendron aralioides HOM05D001993 ORTHO05D004040 2.7e-28 129.0 149 52.3
MBI02_g44629_MAGBIO Magnolia biondii HOM05D001993 ORTHO05D004040 4.5e-28 128.3 152 49.3
Os03g0655700 Oryza sativa ssp. japonica HOM05D001993 ORTHO05D004040 7.7e-28 127.5 152 50.0
Rhsim08G0209300 Rhododendron simsii HOM05D001993 ORTHO05D004040 1.7e-27 126.3 152 51.3
unitig_62.g23356 Utricularia gibba HOM05D001993 ORTHO05D004040 1.7e-27 126.3 152 50.7
Atru.chr13.1967 Acer truncatum HOM05D001993 ORTHO05D004040 2.9e-27 125.6 159 50.9
CANSAT78G2160 Cannabis sativa HOM05D001993 ORTHO05D004040 2.9e-27 125.6 153 49.7
ECA240G4532 Erigeron canadensis HOM05D001993 ORTHO05D004040 2.9e-27 125.6 153 49.7
PGR102G0990 Punica granatum HOM05D001993 ORTHO05D004040 2.9e-27 125.6 152 50.0
Sabra01G0154500 Salix brachista HOM05D001993 ORTHO05D004040 2.9e-27 125.6 152 48.7
PSO478G5069 Papaver somniferum HOM05D001993 ORTHO05D004040 5.0e-27 124.8 152 50.7
PSO541G0229 Papaver somniferum HOM05D001993 ORTHO05D004040 5.0e-27 124.8 152 50.7
TAR636G1963 Trochodendron aralioides HOM05D001993 ORTHO05D004040 5.0e-27 124.8 149 50.3
Aa31LG4G830 Aethionema arabicum HOM05D001993 ORTHO05D004040 6.5e-27 124.4 152 48.0
Aa31LG4G840 Aethionema arabicum HOM05D002499 ORTHO05D004040 6.5e-27 124.4 152 48.0
CSS0034242 Camellia sinensis var. sinensis HOM05D001993 ORTHO05D004040 6.5e-27 124.4 152 50.7
Sc11g0002740 Simmondsia chinensis HOM05D001993 ORTHO05D004040 6.5e-27 124.4 159 47.2
ATR0165G046 Amborella trichopoda HOM05D001993 ORTHO05D004040 8.5e-27 124.0 153 47.1
Cpa.g.sc52.151 Carica papaya HOM05D001993 ORTHO05D004040 8.5e-27 124.0 152 49.3
AUR62016593 Chenopodium quinoa HOM05D001993 ORTHO05D004040 8.5e-27 124.0 152 47.4
FvH4_2g04971 Fragaria vesca HOM05D001993 ORTHO05D004040 8.5e-27 124.0 152 48.7
Manes.11G062800 Manihot esculenta HOM05D001993 ORTHO05D004040 8.5e-27 124.0 154 48.1
Ah.01g004830 Amaranthus hybridus HOM05D001993 ORTHO05D004040 1.1e-26 123.6 152 46.1
Dinv38158 Davidia involucrata HOM05D001993 ORTHO05D004040 1.1e-26 123.6 152 49.3
GSVIVG01023010001 Vitis vinifera HOM05D001993 ORTHO05D004040 1.1e-26 123.6 152 50.7
Aqoxy6G02753 Aquilegia oxysepala HOM05D001993 ORTHO05D004040 1.5e-26 123.2 149 49.7
Ciclev10025744m.g Citrus clementina HOM05D001993 ORTHO05D004040 1.5e-26 123.2 154 48.7
COL.COLO4_10077 Corchorus olitorius HOM05D001993 ORTHO05D004040 1.5e-26 123.2 155 49.0
Dinv23318 Davidia involucrata HOM05D001993 ORTHO05D004040 1.5e-26 123.2 152 49.3
Gohir.A10G072700 Gossypium hirsutum HOM05D001993 ORTHO05D004040 1.5e-26 123.2 152 50.7
Nn8g39686 Nelumbo nucifera HOM05D001993 ORTHO05D004040 1.5e-26 123.2 146 50.7
PSO675G4738 Papaver somniferum HOM05D001993 ORTHO05D004040 1.5e-26 123.2 150 50.0
Actinidia08952 Actinidia chinensis HOM05D001993 ORTHO05D004040 1.9e-26 122.9 161 49.1
BcaB05g25258 Brassica carinata HOM05D001993 ORTHO05D004040 1.9e-26 122.9 152 48.7
A02p23450 Brassica napus HOM05D001993 ORTHO05D004040 1.9e-26 122.9 152 48.7
C02p37150 Brassica napus HOM05D001993 ORTHO05D004040 1.9e-26 122.9 152 48.7
BolC2t09727H Brassica oleracea HOM05D001993 ORTHO05D004040 1.9e-26 122.9 152 48.7
BraA02t07337Z Brassica rapa HOM05D001993 ORTHO05D004040 1.9e-26 122.9 152 48.7
HanXRQChr16g0510241 Helianthus annuus HOM05D001993 ORTHO05D004040 1.9e-26 122.9 152 50.0
HanXRQChr06g0181061 Helianthus annuus HOM05D001993 ORTHO05D004040 2.5e-26 122.5 146 50.0
Potri.001G185600 Populus trichocarpa HOM05D001993 ORTHO05D004040 2.5e-26 122.5 152 48.0
Thecc.06G035700 Theobroma cacao HOM05D001993 ORTHO05D004040 2.5e-26 122.5 152 47.4
CSS0006698 Camellia sinensis var. sinensis HOM05D001993 ORTHO05D004040 3.2e-26 122.1 152 50.0
Eucgr.F03933 Eucalyptus grandis HOM05D001993 ORTHO05D004040 3.2e-26 122.1 152 50.0
Nitab4.5_0002481g0070 Nicotiana tabacum HOM05D001993 ORTHO05D004040 3.2e-26 122.1 152 49.3
Aqoxy1G01546 Aquilegia oxysepala HOM05D001993 ORTHO05D004040 4.2e-26 121.7 149 49.0
AT1G80560 Arabidopsis thaliana HOM05D001993 ORTHO05D004040 4.2e-26 121.7 152 48.0
Carub.0002s2699 Capsella rubella HOM05D001993 ORTHO05D004040 4.2e-26 121.7 152 48.0
DCAR_021360 Daucus carota HOM05D001993 ORTHO05D004040 4.2e-26 121.7 152 50.7
Duzib235G0702 Durio zibethinus HOM05D001993 ORTHO05D004040 4.2e-26 121.7 155 47.7
ECA232G4796 Erigeron canadensis HOM05D001993 ORTHO05D004040 4.2e-26 121.7 142 50.7
Gohir.D10G078300 Gossypium hirsutum HOM05D001993 ORTHO05D004040 4.2e-26 121.7 152 50.0
CSS0044698 Camellia sinensis var. sinensis HOM05D001993 ORTHO05D004040 5.5e-26 121.3 152 50.0
CARHR125330 Cardamine hirsuta HOM05D001993 ORTHO05D004040 5.5e-26 121.3 152 47.4
MD17G1218700 Malus domestica HOM05D001993 ORTHO05D004040 5.5e-26 121.3 152 50.0
Sp5g35220 Schrenkiella parvula HOM05D001993 ORTHO05D004040 5.5e-26 121.3 152 48.0
FvH4_1g23550 Fragaria vesca HOM05D001993 ORTHO05D004040 7.2e-26 120.9 151 50.3
Nitab4.5_0000315g0220 Nicotiana tabacum HOM05D001993 ORTHO05D004040 7.2e-26 120.9 152 48.7
Gorai.011G085100 Gossypium raimondii HOM05D001993 ORTHO05D004040 9.4e-26 120.6 152 49.3
vmacro19031 Vaccinium macrocarpon HOM05D001993 ORTHO05D004040 9.4e-26 120.6 152 48.7
MSTRG.22778 Avicennia marina HOM05D001993 ORTHO05D004040 1.2e-25 120.2 152 48.0
Cfa001917 Carpinus fangiana HOM05D001993 ORTHO05D004040 1.2e-25 120.2 152 48.7
Peaxi162Scf00045g02262 Petunia axillaris HOM05D001993 ORTHO05D004040 1.2e-25 120.2 152 49.3
Solyc05g009030.4 Solanum lycopersicum HOM05D001993 ORTHO05D004040 1.2e-25 120.2 152 48.0
Sopen05g004770 Solanum pennellii HOM05D001993 ORTHO05D004040 1.2e-25 120.2 152 48.0
SGA_v2.0_scaffold37G14738 Striga asiatica HOM05D001993 ORTHO05D004040 1.2e-25 120.2 152 49.3
FAN23G0437 Fragaria x ananassa HOM05D001993 ORTHO05D004040 1.6e-25 119.8 152 48.7
THA.LOC104808191 Tarenaya hassleriana HOM05D001993 ORTHO05D004040 1.6e-25 119.8 153 47.7
AL2G40900 Arabidopsis lyrata HOM05D001993 ORTHO05D004040 2.1e-25 119.4 152 46.7
QL05p033532 Quercus lobata HOM05D001993 ORTHO05D004040 2.1e-25 119.4 159 47.8
RcHm_v2.0_Chr2g0133821 Rosa chinensis HOM05D001993 ORTHO05D004040 2.1e-25 119.4 152 48.0
vmacro06416 Vaccinium macrocarpon HOM05D001993 ORTHO05D004040 2.1e-25 119.4 155 49.0
EL10Ac9g21856 Beta vulgaris HOM05D001993 ORTHO05D004040 2.7e-25 119.0 152 44.7
C06p53940 Brassica napus HOM05D001993 ORTHO05D004040 2.7e-25 119.0 152 46.1
CiPaw.01G251500 Carya illinoinensis HOM05D001993 ORTHO05D004040 2.7e-25 119.0 152 49.3
THA.LOC104812454 Tarenaya hassleriana HOM05D001993 ORTHO05D004040 2.7e-25 119.0 152 47.4
A02p02370 Brassica napus HOM05D001993 ORTHO05D004040 3.6e-25 118.6 152 46.7
C02p06590 Brassica napus HOM05D001993 ORTHO05D004040 3.6e-25 118.6 152 46.7
BraA02t05207Z Brassica rapa HOM05D001993 ORTHO05D004040 3.6e-25 118.6 152 46.7
AUR62011462 Chenopodium quinoa HOM05D001993 ORTHO05D004040 3.6e-25 118.6 153 45.8
Oeu055805.1 Olea europaea HOM05D001993 ORTHO05D004040 3.6e-25 118.6 152 49.3
Sp6g29830 Schrenkiella parvula HOM05D001993 ORTHO05D004040 3.6e-25 118.6 152 46.1
SpUn0049_0030 Schrenkiella parvula HOM05D001993 ORTHO05D004040 3.6e-25 118.6 152 46.1
TWI18G1017 Tripterygium wilfordii HOM05D001993 ORTHO05D004040 3.6e-25 118.6 152 47.4
AT5G14200 Arabidopsis thaliana HOM05D001993 ORTHO05D004040 4.7e-25 118.2 152 46.1
A07p45110 Brassica napus HOM05D001993 ORTHO05D004040 4.7e-25 118.2 152 46.1
CARHR199140 Cardamine hirsuta HOM05D001993 ORTHO05D004040 4.7e-25 118.2 152 46.7
ClCG07G012340 Citrullus lanatus HOM05D001993 ORTHO05D004040 4.7e-25 118.2 152 48.7
Cc11_g03270 Coffea canephora HOM05D001993 ORTHO05D004040 4.7e-25 118.2 152 46.7
Sed0006349 Sechium edule HOM05D001993 ORTHO05D004040 4.7e-25 118.2 153 50.3
PGSC0003DMG400030577 Solanum tuberosum HOM05D001993 ORTHO05D004040 4.7e-25 118.2 152 48.0
BolC6t40408H Brassica oleracea HOM05D001993 ORTHO05D004040 6.1e-25 117.9 152 45.4
BraA07t32014Z Brassica rapa HOM05D001993 ORTHO05D004040 6.1e-25 117.9 152 46.1
Thhalv10013695m.g Eutrema salsugineum HOM05D001993 ORTHO05D004040 6.1e-25 117.9 152 46.7
SalBow7G1960 Salvia bowleyana HOM05D001993 ORTHO05D004040 6.1e-25 117.9 152 48.7
AT1G31180 Arabidopsis thaliana HOM05D001993 ORTHO05D004040 8.0e-25 117.5 152 46.7
BolC2t06605H Brassica oleracea HOM05D001993 ORTHO05D004040 8.0e-25 117.5 152 46.7
Haze_16625 Corylus avellana HOM05D001993 ORTHO05D004040 8.0e-25 117.5 152 48.0
MELO3C017853.2 Cucumis melo HOM05D001993 ORTHO05D004040 8.0e-25 117.5 152 48.7
Prupe.3G094300 Prunus persica HOM05D001993 ORTHO05D004040 8.0e-25 117.5 152 48.0
Thhalv10018649m.g Eutrema salsugineum HOM05D001993 ORTHO05D004040 1.0e-24 117.1 159 45.9
AL6G24870 Arabidopsis lyrata HOM05D001993 ORTHO05D004040 1.4e-24 116.7 152 46.1
CAN.G610.41 Capsicum annuum HOM05D001993 ORTHO05D004040 1.4e-24 116.7 152 48.0
BcaC03g15953 Brassica carinata HOM05D001993 ORTHO05D004040 1.8e-24 116.3 143 48.3
CsaV3_4G001800 Cucumis sativus L. HOM05D001993 ORTHO05D004040 1.8e-24 116.3 152 48.0
Mapoly0001s0386 Marchantia polymorpha HOM05D001993 ORTHO05D004040 3.0e-24 115.5 149 47.0
Sed0011728 Sechium edule HOM05D001993 ORTHO05D004040 3.0e-24 115.5 153 46.4
Hma1.2p1_0135F.1_g061690 Hydrangea macrophylla HOM05D001993 ORTHO05D004040 5.2e-24 114.8 152 47.4
Carub.0006s1240 Capsella rubella HOM05D001993 ORTHO05D004040 6.8e-24 114.4 152 44.1
CDE02G2027 Ceratophyllum demersum HOM05D001993 ORTHO05D004040 6.8e-24 114.4 152 46.1
arahy.Tifrunner.gnm1.ann1.WS718B Arachis hypogaea HOM05D001993 ORTHO05D014738 8.8e-24 114.0 142 47.9
AL1G50860 Arabidopsis lyrata HOM05D001993 ORTHO05D004040 1.5e-23 113.2 152 45.4
Migut.I00729 Erythranthe guttata HOM05D001993 ORTHO05D004040 1.5e-23 113.2 148 46.6
Aa31LG11G14990 Aethionema arabicum HOM05D001993 ORTHO05D004040 2.6e-23 112.5 152 44.7
Pp3c22_9260 Physcomitrium patens HOM05D001993 ORTHO05D004040 7.5e-23 110.9 151 43.0
CBR_g24441 Chara braunii HOM05D001993 ORTHO05D004040 2.2e-22 109.4 157 42.7
AagrBONN_evm.TU.Sc2ySwM_228.2916 Anthoceros agrestis HOM05D001993 ORTHO05D004040 3.7e-22 108.6 157 42.0
CBR_g7976 Chara braunii HOM05D001993 ORTHO05D004040 4.8e-22 108.2 158 41.1
arahy.Tifrunner.gnm1.ann1.9XJ6IP Arachis hypogaea HOM05D001993 ORTHO05D004040 6.3e-22 107.8 71 74.6
SMO201G0043 Selaginella moellendorffii HOM05D001993 ORTHO05D004040 1.4e-21 106.7 159 43.4
HPP92_009455 Vanilla planifolia HOM05D001993 ORTHO05D004040 1.4e-21 106.7 152 45.4
MCO12G388 Micromonas commoda HOM05D001993 ORTHO05D004040 3.1e-21 105.5 143 42.7
C02p37160 Brassica napus HOM05D001993 ORTHO05D004040 7.0e-21 104.4 118 45.8
TAR636G1834 Trochodendron aralioides HOM05D001993 ORTHO05D004040 1.2e-20 103.6 147 47.6
arahy.Tifrunner.gnm1.ann1.G3W1SC Arachis hypogaea HOM05D001993 ORTHO05D004040 3.8e-19 98.6 178 39.3
Sp5g29930 Schrenkiella parvula HOM05D001993 ORTHO05D004040 1.5e-18 96.7 163 38.7
Hund00491 Selenicereus undatus HOM05D001993 ORTHO05D014738 1.5e-18 96.7 76 61.8
FAN24G0510 Fragaria x ananassa HOM05D001993 ORTHO05D014738 1.9e-18 96.3 79 60.8
COL.COLO4_36709 Corchorus olitorius HOM05D001993 ORTHO05D014738 3.3e-18 95.5 72 68.1
Lalb_Chr22g0350741 Lupinus albus HOM05D001993 ORTHO05D014738 9.5e-18 94.0 70 71.4
Sp5g35230 Schrenkiella parvula HOM05D001993 ORTHO05D004040 9.5e-18 94.0 154 37.0
BolC2t09728H Brassica oleracea HOM05D001993 ORTHO05D004040 1.6e-17 93.2 149 36.9
Lj1A617G82 Lonicera japonica HOM05D001993 ORTHO05D004040 2.1e-17 92.8 225 33.8
AL2G40910 Arabidopsis lyrata HOM05D001993 ORTHO05D004040 3.6e-17 92.0 154 36.4
BcaB05g25259 Brassica carinata HOM05D001993 ORTHO05D004040 4.7e-17 91.7 150 38.7
Carub.0002s2700 Capsella rubella HOM05D001993 ORTHO05D004040 8.0e-17 90.9 152 36.8
BcaC03g15957 Brassica carinata HOM05D001993 ORTHO05D004040 1.4e-16 90.1 156 35.9
A02p23480 Brassica napus HOM05D001993 ORTHO05D004040 1.4e-16 90.1 156 35.9
BolC2t09729H Brassica oleracea HOM05D001993 ORTHO05D004040 1.4e-16 90.1 156 35.9
BraA02t07340Z Brassica rapa HOM05D001993 ORTHO05D004040 1.4e-16 90.1 156 35.9
C02p37180 Brassica napus HOM05D001993 ORTHO05D004040 2.3e-16 89.4 156 35.9
Actinidia25437 Actinidia chinensis HOM05D001993 ORTHO05D014738 5.2e-16 88.2 73 61.6
Cre07.g325400 Chlamydomonas reinhardtii HOM05D001993 ORTHO05D004040 1.2e-15 87.0 161 35.4
CARHR074080 Cardamine hirsuta HOM05D001993 ORTHO05D004040 1.5e-15 86.7 163 36.2
A02p23460 Brassica napus HOM05D001993 ORTHO05D004040 3.4e-15 85.5 162 33.3
BraA02t07338Z Brassica rapa HOM05D001993 ORTHO05D004040 3.4e-15 85.5 162 33.3
CARHR205690 Cardamine hirsuta HOM05D001993 ORTHO05D004040 3.4e-15 85.5 154 33.1
BcaC03g15954 Brassica carinata HOM05D001993 ORTHO05D004040 7.5e-15 84.3 162 32.7
PRCOL_00006259 Prasinoderma coloniale HOM05D001993 ORTHO05D004040 5.4e-13 78.2 144 35.4
AT1G80555 Arabidopsis thaliana HOM05D001993 ORTHO05D014738 1.2e-12 77.0 73 52.1
PSO017G5288 Papaver somniferum HOM05D001993 ORTHO05D004040 3.6e-09 65.5 101 42.6
FAN20G0035 Fragaria x ananassa HOM05D001993 ORTHO05D004040 2.3e-08 62.8 98 43.9
Actinidia03218 Actinidia chinensis HOM05D001993 ORTHO05D017206 3.1e-08 62.4 101 41.6
Ca_01035_v3 Cicer arietinum L. HOM05D001993 ORTHO05D004040 2.0e-07 59.7 43 79.1
SEGI_15241 Sequoiadendron giganteum HOM05D001993 ORTHO05D004040 2.0e-07 59.7 110 36.4
vmacro17160 Vaccinium macrocarpon HOM05D001993 ORTHO05D000156 3.4e-07 58.9 45 73.3
CBR_g55786 Chara braunii HOM05D001993 ORTHO05D004040 4.4e-07 58.5 151 31.8
BcaB04g21073 Brassica carinata HOM05D001993 ORTHO05D017206 1.7e-06 56.6 30 93.3
FvH4_1g23541 Fragaria vesca HOM05D001993 ORTHO05D017206 1.7e-06 56.6 33 87.9
MBI02_g33734_MAGBIO Magnolia biondii HOM05D001993 ORTHO05D004040 2.2e-06 56.2 30 90.0
Actinidia25438 Actinidia chinensis HOM05D001993 ORTHO05D004040 2.9e-06 55.8 30 90.0
arahy.Tifrunner.gnm1.ann1.GNX4LQ Arachis hypogaea HOM05D001993 ORTHO05D017206 2.9e-06 55.8 98 39.8


User provided reference genes

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