Gene: Aa31LG4G840

General Information

Structural Information

  • Species Aethionema arabicum
  • Gene Identifier Aa31LG4G840
  • Transcript Identifier Aa31LG4G840.mRNA1
  • Gene Type Coding gene
  • Location LG-4 : 317219-322775 : positive

Gene Family Information

  • ID HOM05D002499
  • #Genes/#Species 272/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Aa31LG4G840.mRNA1
  • Alias Aa31LG4G840
  • Alias Aa31LG4G840-mRNA-1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
ISO
PLAZA Homology (enrichment)protein ubiquitination HOM05D002499
GO:0010029
ISO
PLAZA Integrative Orthologyregulation of seed germination AT2G26000
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT1G80560
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT1G80560
GO:0009098
IEA
InterProleucine biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT2G26000
GO:0070403
ISO
PLAZA Integrative OrthologyNAD+ binding AT1G80560
GO:0046982
ISO
PLAZA Integrative Orthologyprotein heterodimerization activity AT2G26000
GO:0043130
ISO
PLAZA Integrative Orthologyubiquitin binding AT2G26000
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G26000
GO:0008270
IEA
InterProzinc ion binding
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT1G80560
GO:0003862
IEA
InterPro3-isopropylmalate dehydrogenase activity
GO:0016616
IEA
InterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000151
ISO
PLAZA Integrative Orthologyubiquitin ligase complex AT2G26000
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G80560
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT1G80560
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G80560

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001607 Zinc finger, UBP-type
IPR001841 Zinc finger, RING-type
IPR024084 Isopropylmalate dehydrogenase-like domain
IPR004429 Isopropylmalate dehydrogenase
IPR011422 BRCA1-associated 2
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.1.4.3.3.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ubiquitin protein ligase (BRIZ)
30.1.1.4 Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.methylthioalkylmalate dehydrogenase (IPMDH)
4.1.3.2.5.3 Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.leucine.3-isopropylmalate dehydrogenase