Gene: AT1G31180

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G31180
  • Transcript Identifier AT1G31180.2
  • Gene Type Coding gene
  • Location Chr1 : 11142843-11144662 : negative

Gene Family Information

  • ID HOM05D001993
  • #Genes/#Species 332/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G31180.2
  • symbol IMD3
  • Alias ATIMD3,ARABIDOPSIS ISOPROPYLMALATE DEHYDROGENASE 3,IPMDH1,ISOPROPYLMALATE DEHYDROGENASE 1
  • uniprot Q9SA14

Descriptions

  • Description isopropylmalate dehydrogenase 3
  • Computational description isopropylmalate dehydrogenase 3 (IMD3); FUNCTIONS IN: 3-isopropylmalate dehydrogenase activity; INVOLVED IN: leucine biosynthetic process, response to salt stress, metabolic process; LOCATED IN: thylakoid, chloroplast, chloroplast stroma, plastid; EXPRESSED IN: fruit, root, leaf; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Isopropylmalate dehydrogenase (InterPro:IPR004429), Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isopropylmalate dehydrogenase 1 (TAIR:AT5G14200.1); Has 15253 Blast hits to 15253 proteins in 2616 species: Archae - 395; Bacteria - 8280; Metazoa - 576; Fungi - 831; Plants - 243; Viruses - 0; Other Eukaryotes - 4928 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008652
IEA
GOA Databasecellular amino acid biosynthetic process
GO:0009098
IDA, IMP, IGI
IBA
IEA
Gene Ontologyleucine biosynthetic process1 2 3
GO:0009098
IEA
InterProleucine biosynthetic process
GO:0009082
IEA
GOA Databasebranched-chain amino acid biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003862
IDA, IMP, IGI
IBA
IEA
Gene Ontology3-isopropylmalate dehydrogenase activity1 2 3
GO:0003862
IEA
InterPro3-isopropylmalate dehydrogenase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016616
IEA
GOA Databaseoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016616
IEA
InterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287
IEA
Gene OntologyNAD binding
GO:0000287
IEA
Gene Ontologymagnesium ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
IDA
IEA
GOA Databasechloroplast stroma
GO:0009570
HDA
Gene Ontologychloroplast stroma4
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast5
GO:0009579
IDA
GOA Databasethylakoid
GO:0009579
HDA
Gene Ontologythylakoid6
GO:0009536
IEA
GOA Databaseplastid
GO:0009536
IDA
ISS
Gene Ontologyplastid1 7
GO:0005829
HDA
RCA
Gene Ontologycytosol8 9

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024084 Isopropylmalate dehydrogenase-like domain
IPR004429 Isopropylmalate dehydrogenase
Mapman id Description
30.1.1.4 Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.methylthioalkylmalate dehydrogenase (IPMDH)
4.1.3.2.5.3 Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.leucine.3-isopropylmalate dehydrogenase