Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050113 Camellia sinensis var. sinensis HOM05D003931 ORTHO05D004577 5.8e-119 431.0 236 100.0
Cfa020372 Carpinus fangiana HOM05D003931 ORTHO05D004577 4.3e-90 335.1 206 74.8
Dinv40740 Davidia involucrata HOM05D003931 ORTHO05D004577 4.8e-89 331.6 197 77.7
Atru.chr2.3378 Acer truncatum HOM05D003931 ORTHO05D004577 4.1e-88 328.6 204 72.5
Prupe.4G210600 Prunus persica HOM05D003931 ORTHO05D004577 4.1e-88 328.6 203 74.9
Haze_09657 Corylus avellana HOM05D003931 ORTHO05D004577 5.3e-88 328.2 197 76.6
FAN11G2983 Fragaria x ananassa HOM05D003931 ORTHO05D004577 9.0e-88 327.4 197 73.6
CiPaw.11G187800 Carya illinoinensis HOM05D003931 ORTHO05D004577 1.2e-87 327.0 204 74.0
FvH4_3g22400 Fragaria vesca HOM05D003931 ORTHO05D004577 3.4e-87 325.5 197 73.6
FAN16G2486 Fragaria x ananassa HOM05D003931 ORTHO05D004577 5.8e-87 324.7 196 74.0
FAN21G1679 Fragaria x ananassa HOM05D003931 ORTHO05D004577 5.8e-87 324.7 197 73.6
FAN21G3611 Fragaria x ananassa HOM05D003931 ORTHO05D004577 5.8e-87 324.7 197 73.6
MD11G1221200 Malus domestica HOM05D003931 ORTHO05D004577 5.8e-87 324.7 208 72.6
RcHm_v2.0_Chr5g0039071 Rosa chinensis HOM05D003931 ORTHO05D004577 1.3e-86 323.6 197 74.1
Hma1.2p1_1271F.1_g271720 Hydrangea macrophylla HOM05D003931 ORTHO05D004577 2.9e-86 322.4 195 73.3
QL08p011429 Quercus lobata HOM05D003931 ORTHO05D004577 3.8e-86 322.0 196 75.5
QL08p011634 Quercus lobata HOM05D003931 ORTHO05D004577 3.8e-86 322.0 196 75.5
QL08p011649 Quercus lobata HOM05D003931 ORTHO05D004577 3.8e-86 322.0 196 75.5
MD03G1205300 Malus domestica HOM05D003931 ORTHO05D004577 5.0e-86 321.6 203 72.4
Oeu042929.1 Olea europaea HOM05D003931 ORTHO05D004577 1.1e-85 320.5 208 70.7
vmacro11735 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 7.1e-85 317.8 194 76.8
Actinidia09908 Actinidia chinensis HOM05D003931 ORTHO05D004577 9.3e-85 317.4 189 79.9
Lsat_1_v5_gn_5_6120 Lactuca sativa HOM05D003931 ORTHO05D004577 1.2e-84 317.0 198 72.7
Manes.15G073200 Manihot esculenta HOM05D003931 ORTHO05D004577 1.2e-84 317.0 198 71.2
Sabra11G0123500 Salix brachista HOM05D003931 ORTHO05D004577 1.6e-84 316.6 197 72.6
Nn1g03571 Nelumbo nucifera HOM05D003931 ORTHO05D004577 2.1e-84 316.2 204 70.1
Rhsim06G0216100 Rhododendron simsii HOM05D003931 ORTHO05D004577 2.7e-84 315.8 194 75.3
TWI38G0918 Tripterygium wilfordii HOM05D003931 ORTHO05D004577 2.7e-84 315.8 202 71.8
Potri.001G424700 Populus trichocarpa HOM05D003931 ORTHO05D004577 4.6e-84 315.1 197 71.6
Lj1C870G17 Lonicera japonica HOM05D003931 ORTHO05D004577 7.9e-84 314.3 204 70.6
Aqoxy1G03269 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 1.3e-83 313.5 204 70.6
CANSAT64G1454 Cannabis sativa HOM05D003931 ORTHO05D004577 1.3e-83 313.5 196 71.9
Ca_14721_v3 Cicer arietinum L. HOM05D003931 ORTHO05D004577 1.8e-83 313.2 194 73.2
Lsat_1_v5_gn_5_6180 Lactuca sativa HOM05D003931 ORTHO05D004577 1.8e-83 313.2 205 69.3
Migut.M01779 Erythranthe guttata HOM05D003931 ORTHO05D004577 3.0e-83 312.4 200 72.0
EL10Ac4g07844 Beta vulgaris HOM05D003931 ORTHO05D004577 3.9e-83 312.0 207 68.1
Ah.04g165790 Amaranthus hybridus HOM05D003931 ORTHO05D004577 5.1e-83 311.6 193 72.5
MSTRG.6909 Avicennia marina HOM05D003931 ORTHO05D004577 5.1e-83 311.6 199 71.4
Eucgr.F00963 Eucalyptus grandis HOM05D003931 ORTHO05D004577 8.7e-83 310.8 202 70.8
Thhalv10027264m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 8.7e-83 310.8 196 73.0
VMungo0540G1582 Vigna mungo HOM05D003931 ORTHO05D004577 8.7e-83 310.8 197 72.6
Carub.0007s1381 Capsella rubella HOM05D003931 ORTHO05D004577 1.1e-82 310.5 202 70.8
AL7G25800 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 1.5e-82 310.1 196 72.4
BcaB03g12524 Brassica carinata HOM05D003931 ORTHO05D004577 1.5e-82 310.1 193 72.5
BraA08t34014Z Brassica rapa HOM05D003931 ORTHO05D004577 1.5e-82 310.1 193 73.1
THA.LOC104809192 Tarenaya hassleriana HOM05D003931 ORTHO05D004577 1.5e-82 310.1 196 71.9
A08p20580 Brassica napus HOM05D003931 ORTHO05D004577 1.9e-82 309.7 193 72.5
AUR62020469 Chenopodium quinoa HOM05D003931 ORTHO05D004577 1.9e-82 309.7 202 68.3
ClCG10G005490 Citrullus lanatus HOM05D003931 ORTHO05D004577 1.9e-82 309.7 196 70.9
Glyma.18G099500 Glycine max HOM05D003931 ORTHO05D004577 2.5e-82 309.3 196 73.5
Ciclev10009005m.g Citrus clementina HOM05D003931 ORTHO05D004577 5.7e-82 308.1 200 71.5
MELO3C025390.2 Cucumis melo HOM05D003931 ORTHO05D004577 5.7e-82 308.1 196 69.4
Sabra16G0288300 Salix brachista HOM05D003931 ORTHO05D004577 5.7e-82 308.1 197 71.1
BolC1t02250H Brassica oleracea HOM05D003931 ORTHO05D004577 7.4e-82 307.8 202 69.8
A01p18190 Brassica napus HOM05D003931 ORTHO05D004577 9.7e-82 307.4 195 71.8
C01p23150 Brassica napus HOM05D003931 ORTHO05D004577 1.3e-81 307.0 195 71.8
Glyma.08G314700 Glycine max HOM05D003931 ORTHO05D004577 1.3e-81 307.0 196 71.9
Cc05_g13590 Coffea canephora HOM05D003931 ORTHO05D004577 1.6e-81 306.6 207 68.6
Gorai.002G087700 Gossypium raimondii HOM05D003931 ORTHO05D004577 1.6e-81 306.6 205 68.3
BraA01t01774Z Brassica rapa HOM05D003931 ORTHO05D004577 2.2e-81 306.2 195 71.3
AUR62015742 Chenopodium quinoa HOM05D003931 ORTHO05D004577 2.2e-81 306.2 197 69.5
HanXRQChr05g0159031 Helianthus annuus HOM05D003931 ORTHO05D004577 2.8e-81 305.8 209 67.0
PGR083G2742 Punica granatum HOM05D003931 ORTHO05D004577 2.8e-81 305.8 202 70.3
Lalb_Chr02g0155621 Lupinus albus HOM05D003931 ORTHO05D004577 3.7e-81 305.4 206 67.0
Lalb_Chr06g0171911 Lupinus albus HOM05D003931 ORTHO05D004577 3.7e-81 305.4 204 68.1
Phvul.006G040800 Phaseolus vulgaris HOM05D003931 ORTHO05D004577 3.7e-81 305.4 194 72.2
CARHR234700 Cardamine hirsuta HOM05D003931 ORTHO05D004577 4.8e-81 305.1 196 69.9
Gohir.D01G065800 Gossypium hirsutum HOM05D003931 ORTHO05D004577 4.8e-81 305.1 205 67.8
Peaxi162Scf00450g00075 Petunia axillaris HOM05D003931 ORTHO05D004577 4.8e-81 305.1 200 69.5
Sed0028072 Sechium edule HOM05D003931 ORTHO05D004577 4.8e-81 305.1 194 70.6
Gohir.A01G078700 Gossypium hirsutum HOM05D003931 ORTHO05D004577 6.3e-81 304.7 205 68.3
BcaC07g38267 Brassica carinata HOM05D003931 ORTHO05D004577 8.2e-81 304.3 196 70.4
C08p10140 Brassica napus HOM05D003931 ORTHO05D004577 8.2e-81 304.3 196 70.4
BolC8t48692H Brassica oleracea HOM05D003931 ORTHO05D004577 8.2e-81 304.3 196 70.4
AT4G27030 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 1.4e-80 303.5 196 71.4
CsaV3_3G005230 Cucumis sativus L. HOM05D003931 ORTHO05D004577 1.4e-80 303.5 196 68.9
arahy.Tifrunner.gnm1.ann1.07EMGU Arachis hypogaea HOM05D003931 ORTHO05D004577 1.8e-80 303.1 194 71.1
Psat5g180680 Pisum sativum HOM05D003931 ORTHO05D004577 1.8e-80 303.1 194 71.1
Medtr3g051220 Medicago truncatula HOM05D003931 ORTHO05D004577 3.1e-80 302.4 194 70.1
Nitab4.5_0001604g0100 Nicotiana tabacum HOM05D003931 ORTHO05D004577 3.1e-80 302.4 206 67.0
Lj6g0018199 Lotus japonicus HOM05D003931 ORTHO05D004577 5.3e-80 301.6 199 70.9
TPR.G16574 Trifolium pratense HOM05D003931 ORTHO05D004577 5.3e-80 301.6 194 70.6
TAR626G0527 Trochodendron aralioides HOM05D003931 ORTHO05D004577 9.0e-80 300.8 202 68.8
CAN.G337.115 Capsicum annuum HOM05D003931 ORTHO05D004577 1.2e-79 300.4 206 65.0
SGA_v2.0_scaffold172G38997 Striga asiatica HOM05D003931 ORTHO05D004577 1.2e-79 300.4 194 72.2
Sp7g25010 Schrenkiella parvula HOM05D003931 ORTHO05D004577 3.4e-79 298.9 195 69.2
Aa31LG5G10360 Aethionema arabicum HOM05D003931 ORTHO05D004577 7.7e-79 297.7 195 69.7
Sc03g0008690 Simmondsia chinensis HOM05D003931 ORTHO05D004577 7.7e-79 297.7 203 67.0
PGSC0003DMG400022225 Solanum tuberosum HOM05D003931 ORTHO05D004577 2.2e-78 296.2 200 66.0
Thecc.07G042800 Theobroma cacao HOM05D003931 ORTHO05D004577 2.2e-78 296.2 202 68.3
Prupe.4G210500 Prunus persica HOM05D003931 ORTHO05D004577 8.5e-78 294.3 197 69.5
unitig_62.g23279 Utricularia gibba HOM05D003931 ORTHO05D004577 1.4e-77 293.5 197 70.1
Sopen07g032620 Solanum pennellii HOM05D003931 ORTHO05D004577 7.2e-77 291.2 200 64.5
DCAR_008677 Daucus carota HOM05D003931 ORTHO05D004577 1.6e-76 290.0 198 66.7
PSO675G5012 Papaver somniferum HOM05D003931 ORTHO05D004577 6.1e-76 288.1 189 68.8
PSO541G1838 Papaver somniferum HOM05D003931 ORTHO05D004577 1.0e-75 287.3 200 64.5
Solyc07g064410.1 Solanum lycopersicum HOM05D003931 ORTHO05D004577 1.0e-75 287.3 200 63.0
Aa31LG5G10380 Aethionema arabicum HOM05D003931 ORTHO05D004577 4.3e-74 282.0 194 65.5
CDE05G0277 Ceratophyllum demersum HOM05D003931 ORTHO05D007395 2.2e-73 279.6 200 61.5
ATR0752G116 Amborella trichopoda HOM05D003931 ORTHO05D004577 6.3e-73 278.1 200 65.5
Sp7g24990 Schrenkiella parvula HOM05D003931 ORTHO05D004577 6.3e-73 278.1 195 63.6
AT1G62190 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 1.1e-72 277.3 196 62.8
CARHR049940 Cardamine hirsuta HOM05D003931 ORTHO05D004577 1.4e-72 276.9 195 62.6
Sc03g0008680 Simmondsia chinensis HOM05D003931 ORTHO05D004577 4.1e-72 275.4 193 65.8
QL08p011463 Quercus lobata HOM05D003931 ORTHO05D004577 1.2e-71 273.9 193 65.3
Carub.0002s0286 Capsella rubella HOM05D003931 ORTHO05D004577 2.0e-71 273.1 195 62.1
Thhalv10025879m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 1.0e-70 270.8 197 62.9
Cfa009708 Carpinus fangiana HOM05D003931 ORTHO05D004577 1.3e-70 270.4 197 64.0
Duzib213G0550 Durio zibethinus HOM05D003931 ORTHO05D004577 1.3e-70 270.4 191 63.9
Thhalv10026787m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 1.3e-70 270.4 193 63.7
vmacro11734 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 8.5e-70 267.7 198 62.1
C07p55050 Brassica napus HOM05D003931 ORTHO05D004577 7.9e-68 261.2 195 61.5
Carub.0004s0202 Capsella rubella HOM05D003931 ORTHO05D004577 1.0e-67 260.8 185 64.3
AL4G12480 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 3.0e-67 259.2 187 63.6
AUR62015741 Chenopodium quinoa HOM05D003931 ORTHO05D004577 3.0e-67 259.2 204 58.8
BcaC06g32716 Brassica carinata HOM05D003931 ORTHO05D004577 5.1e-67 258.5 193 60.6
Haze_23062 Corylus avellana HOM05D003931 ORTHO05D004577 6.7e-67 258.1 185 64.9
BolC7t46007H Brassica oleracea HOM05D003931 ORTHO05D004577 1.1e-66 257.3 195 60.5
BraA03t14771Z Brassica rapa HOM05D003931 ORTHO05D004577 2.6e-66 256.1 195 60.0
Sp7g25000 Schrenkiella parvula HOM05D003931 ORTHO05D004577 5.7e-66 255.0 197 60.9
A03p57020 Brassica napus HOM05D003931 ORTHO05D004577 7.4e-66 254.6 195 59.5
PGSC0003DMG400004435 Solanum tuberosum HOM05D003931 ORTHO05D004577 2.2e-65 253.1 200 58.5
Atru.chr2.3337 Acer truncatum HOM05D003931 ORTHO05D004577 3.7e-65 252.3 192 60.4
AT2G22890 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 3.7e-65 252.3 189 61.4
Nitab4.5_0004336g0020 Nicotiana tabacum HOM05D003931 ORTHO05D004577 8.2e-65 251.1 173 66.5
Atru.chr2.3340 Acer truncatum HOM05D003931 ORTHO05D004577 3.1e-64 249.2 192 59.4
Sc03g0008670 Simmondsia chinensis HOM05D003931 ORTHO05D004577 4.5e-63 245.4 194 57.7
Lsat_1_v5_gn_5_5140 Lactuca sativa HOM05D003931 ORTHO05D004577 7.7e-63 244.6 197 55.8
BcaB03g12523 Brassica carinata HOM05D003931 ORTHO05D004577 1.0e-62 244.2 189 61.4
Zm00001eb413170 Zea mays HOM05D003931 ORTHO05D004577 2.2e-62 243.0 192 58.9
BcaC07g38264 Brassica carinata HOM05D003931 ORTHO05D004577 1.6e-60 236.9 188 59.6
BraA08t34015Z Brassica rapa HOM05D003931 ORTHO05D004577 1.6e-60 236.9 188 59.6
BcaC07g38266 Brassica carinata HOM05D003931 ORTHO05D004577 3.6e-60 235.7 188 59.6
C08p10100 Brassica napus HOM05D003931 ORTHO05D004577 3.6e-60 235.7 188 59.6
BolC8t48689H Brassica oleracea HOM05D003931 ORTHO05D004577 3.6e-60 235.7 188 59.6
BolC8t48691H Brassica oleracea HOM05D003931 ORTHO05D004577 3.6e-60 235.7 188 59.6
A08p20590 Brassica napus HOM05D003931 ORTHO05D004577 6.1e-60 235.0 188 59.0
FAN11G0561 Fragaria x ananassa HOM05D003931 ORTHO05D004577 8.0e-60 234.6 200 54.5
QL09p032903 Quercus lobata HOM05D003931 ORTHO05D004577 1.1e-58 230.7 154 69.5
Oeu062594.1 Olea europaea HOM05D003931 ORTHO05D004577 3.3e-58 229.2 199 54.8
SEGI_34207 Sequoiadendron giganteum HOM05D003931 ORTHO05D004577 2.8e-57 226.1 194 57.2
CANSAT11G0562 Cannabis sativa HOM05D003931 ORTHO05D004577 3.7e-57 225.7 179 59.2
Lj6g0018599 Lotus japonicus HOM05D003931 ORTHO05D004577 6.3e-57 224.9 187 56.1
Os08g0187900 Oryza sativa ssp. japonica HOM05D003931 ORTHO05D004577 1.1e-56 224.2 193 55.4
Mapoly0034s0071 Marchantia polymorpha HOM05D003931 ORTHO05D004577 7.0e-56 221.5 185 54.1
CANSAT11G1176 Cannabis sativa HOM05D003931 ORTHO05D004577 2.1e-52 209.9 180 53.9
SGA_v2.0_scaffold9G05067 Striga asiatica HOM05D003931 ORTHO05D004577 2.7e-52 209.5 201 48.8
AagrBONN_evm.TU.Sc2ySwM_368.1941 Anthoceros agrestis HOM05D003931 ORTHO05D004577 6.8e-51 204.9 180 52.2
Aqoxy1G03270 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 8.8e-51 204.5 185 53.5
Migut.H01834 Erythranthe guttata HOM05D003931 ORTHO05D004577 2.0e-50 203.4 192 50.0
COL.COLO4_09644 Corchorus olitorius HOM05D003931 ORTHO05D004577 2.6e-50 203.0 190 54.7
Eucgr.L01106 Eucalyptus grandis HOM05D003931 ORTHO05D004577 4.4e-50 202.2 202 52.0
MCO05G373 Micromonas commoda HOM05D003931 ORTHO05D004577 1.7e-49 200.3 199 48.7
Pp3c13_12570 Physcomitrium patens HOM05D003931 ORTHO05D004577 1.7e-49 200.3 189 49.2
Cre16.g673001 Chlamydomonas reinhardtii HOM05D003931 ORTHO05D004577 3.7e-49 199.1 190 50.0
SMO364G0503 Selaginella moellendorffii HOM05D003931 ORTHO05D004577 8.3e-49 198.0 198 47.5
Migut.H01835 Erythranthe guttata HOM05D003931 ORTHO05D004577 1.8e-48 196.8 189 49.7
FvH4_3g22391 Fragaria vesca HOM05D003931 ORTHO05D004577 7.7e-47 191.4 192 50.0
unitig_749.g13966 Utricularia gibba HOM05D003931 ORTHO05D004577 6.5e-46 188.3 194 45.4
Cpa.g.sc97.27 Carica papaya HOM05D003931 ORTHO05D004577 9.4e-45 184.5 132 63.6
SGA_v2.0_scaffold9G05070 Striga asiatica HOM05D003931 ORTHO05D004577 2.3e-43 179.9 184 46.7
PRCOL_00003954 Prasinoderma coloniale HOM05D003931 ORTHO05D004577 5.2e-43 178.7 187 45.5
Zm00001eb413200 Zea mays HOM05D003931 ORTHO05D004577 6.8e-43 178.3 197 48.7
COL.COLO4_07219 Corchorus olitorius HOM05D003931 ORTHO05D004577 3.7e-41 172.6 133 61.7
ECA246G1165 Erigeron canadensis HOM05D003931 ORTHO05D004577 3.7e-41 172.6 153 56.2
Migut.H01836 Erythranthe guttata HOM05D003931 ORTHO05D004577 1.6e-39 167.2 156 50.6
CBR_g30523 Chara braunii HOM05D003931 ORTHO05D004577 1.7e-38 163.7 270 34.8
Cfa009711 Carpinus fangiana HOM05D003931 ORTHO05D004577 6.1e-36 155.2 133 59.4
AL3G48190 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 1.7e-33 147.1 90 68.9
CDE05G0281 Ceratophyllum demersum HOM05D003931 ORTHO05D004577 2.9e-33 146.4 118 54.2
Haze_23061 Corylus avellana HOM05D003931 ORTHO05D004577 7.8e-31 138.3 87 72.4
COL.COLO4_07218 Corchorus olitorius HOM05D003931 ORTHO05D004577 1.3e-30 137.5 106 64.2
C01p23190 Brassica napus HOM05D003931 ORTHO05D004577 5.6e-29 132.1 76 76.3
C08p10120 Brassica napus HOM05D003931 ORTHO05D004577 2.0e-23 113.6 84 59.5
BcaC06g32715 Brassica carinata HOM05D003931 ORTHO05D004577 4.6e-15 85.9 60 65.0
BcaC09g50623 Brassica carinata HOM05D003931 ORTHO05D004577 3.2e-08 63.2 58 53.4
unitig_26.g9959 Utricularia gibba HOM05D001404 ORTHO05D026306 3.2e-08 63.2 41 68.3
unitig_26.g9960 Utricularia gibba HOM05D003931 ORTHO05D004577 7.8e-07 58.5 40 55.0


User provided reference genes

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