Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050056 Camellia sinensis var. sinensis HOM05D005790 ORTHO05D007464 8.0e-227 790.0 386 100.0
CSS0048998 Camellia sinensis var. sinensis HOM05D005790 ORTHO05D007464 3.6e-203 711.4 355 98.6
Dinv31817 Davidia involucrata HOM05D005790 ORTHO05D007464 2.7e-190 668.7 386 83.4
Actinidia37976 Actinidia chinensis HOM05D005790 ORTHO05D007464 7.9e-190 667.2 386 84.2
vmacro21704 Vaccinium macrocarpon HOM05D005790 ORTHO05D007464 1.9e-180 636.0 397 78.8
GSVIVG01009836001 Vitis vinifera HOM05D005790 ORTHO05D007464 3.8e-176 621.7 387 75.7
Rhsim06G0026000 Rhododendron simsii HOM05D005790 ORTHO05D007464 9.3e-175 617.1 469 67.6
Cfa013914 Carpinus fangiana HOM05D005790 ORTHO05D007464 4.1e-170 601.7 386 73.3
RcHm_v2.0_Chr6g0272131 Rosa chinensis HOM05D005790 ORTHO05D007464 5.1e-165 584.7 385 73.0
TAR381G1687 Trochodendron aralioides HOM05D005790 ORTHO05D007464 1.1e-164 583.6 406 70.0
Prupe.1G369900 Prunus persica HOM05D005790 ORTHO05D007464 1.5e-164 583.2 387 72.9
Manes.13G125500 Manihot esculenta HOM05D005790 ORTHO05D007464 4.5e-161 571.6 387 72.1
QL02p010842 Quercus lobata HOM05D005790 ORTHO05D007464 5.9e-161 571.2 453 63.4
FvH4_2g39120 Fragaria vesca HOM05D005790 ORTHO05D007464 1.0e-160 570.5 385 70.4
CiPaw.07G153400 Carya illinoinensis HOM05D005790 ORTHO05D007464 4.2e-159 565.1 388 70.6
CANSAT01G0079 Cannabis sativa HOM05D005790 ORTHO05D007464 2.7e-158 562.4 385 69.9
MD15G1016100 Malus domestica HOM05D005790 ORTHO05D007464 4.6e-158 561.6 388 70.9
Potri.009G002100 Populus trichocarpa HOM05D005790 ORTHO05D007464 3.9e-157 558.5 386 70.5
FAN20G0385 Fragaria x ananassa HOM05D005790 ORTHO05D007464 8.8e-157 557.4 393 68.2
MD08G1017100 Malus domestica HOM05D005790 ORTHO05D007464 3.7e-155 552.0 411 66.2
PSO675G3524 Papaver somniferum HOM05D005790 ORTHO05D007464 1.8e-154 549.7 383 69.7
TWI36G0257 Tripterygium wilfordii HOM05D005790 ORTHO05D007464 2.4e-154 549.3 410 65.4
PGSC0003DMG400016117 Solanum tuberosum HOM05D005790 ORTHO05D007464 6.9e-154 547.7 386 68.9
PGR031G1208 Punica granatum HOM05D005790 ORTHO05D007464 5.9e-153 544.7 387 68.5
Ciclev10008674m.g Citrus clementina HOM05D005790 ORTHO05D007464 7.7e-153 544.3 382 69.1
FAN15G2431 Fragaria x ananassa HOM05D005790 ORTHO05D007464 1.3e-152 543.5 423 62.6
AUR62014415 Chenopodium quinoa HOM05D005790 ORTHO05D007464 3.8e-152 542.0 404 65.1
FAN20G1847 Fragaria x ananassa HOM05D005790 ORTHO05D007464 3.8e-152 542.0 422 63.5
Sopen11g005650 Solanum pennellii HOM05D005790 ORTHO05D007464 5.0e-152 541.6 386 67.9
AUR62019151 Chenopodium quinoa HOM05D005790 ORTHO05D007464 1.4e-151 540.0 386 66.8
Solyc11g010910.3 Solanum lycopersicum HOM05D005790 ORTHO05D007464 1.4e-151 540.0 386 67.6
PSO541G0736 Papaver somniferum HOM05D005790 ORTHO05D007464 9.4e-151 537.3 383 69.2
COL.COLO4_26188 Corchorus olitorius HOM05D005790 ORTHO05D007464 1.6e-150 536.6 390 67.7
Gohir.A06G005800 Gossypium hirsutum HOM05D005790 ORTHO05D007464 1.6e-150 536.6 391 66.8
Lj1g0012079 Lotus japonicus HOM05D005790 ORTHO05D007464 3.6e-150 535.4 386 66.6
Cc10_g02010 Coffea canephora HOM05D005790 ORTHO05D007464 6.1e-150 534.6 386 69.7
Glyma.06G026400 Glycine max HOM05D005790 ORTHO05D007464 6.7e-149 531.2 386 66.6
Gorai.010G006000 Gossypium raimondii HOM05D005790 ORTHO05D007464 8.8e-149 530.8 391 66.2
Sed0009865 Sechium edule HOM05D005790 ORTHO05D007464 1.1e-148 530.4 379 66.5
CARHR237760 Cardamine hirsuta HOM05D005790 ORTHO05D007464 1.5e-148 530.0 387 64.9
ECA247G0379 Erigeron canadensis HOM05D005790 ORTHO05D007464 1.5e-148 530.0 385 65.7
Gohir.D06G001600 Gossypium hirsutum HOM05D005790 ORTHO05D007464 2.6e-148 529.3 391 66.2
Lsat_1_v5_gn_1_16241 Lactuca sativa HOM05D005790 ORTHO05D007464 2.6e-148 529.3 385 65.7
Lalb_Chr08g0246071 Lupinus albus HOM05D005790 ORTHO05D007464 2.6e-148 529.3 385 66.5
Sp7g27670 Schrenkiella parvula HOM05D005790 ORTHO05D007464 2.6e-148 529.3 387 65.4
CsaV3_1G045470 Cucumis sativus L. HOM05D005790 ORTHO05D007464 3.3e-148 528.9 386 67.4
Aqoxy2G03135 Aquilegia oxysepala HOM05D005790 ORTHO05D007464 4.4e-148 528.5 380 66.8
arahy.Tifrunner.gnm1.ann1.BXK9RQ Arachis hypogaea HOM05D005790 ORTHO05D007464 5.7e-148 528.1 380 66.8
MSTRG.18414 Avicennia marina HOM05D005790 ORTHO05D007464 9.7e-148 527.3 386 66.8
EL10Ac1g00445 Beta vulgaris HOM05D005790 ORTHO05D007464 1.3e-147 526.9 386 65.5
VMungo1309G1814 Vigna mungo HOM05D005790 ORTHO05D007464 1.7e-147 526.6 387 66.1
Phvul.009G014700 Phaseolus vulgaris HOM05D005790 ORTHO05D007464 4.8e-147 525.0 386 65.3
AL7G22390 Arabidopsis lyrata HOM05D005790 ORTHO05D007464 8.2e-147 524.2 387 63.6
MELO3C024652.2 Cucumis melo HOM05D005790 ORTHO05D007464 1.1e-146 523.9 386 66.8
Eucgr.J01034 Eucalyptus grandis HOM05D005790 ORTHO05D007464 4.1e-146 521.9 386 66.6
arahy.Tifrunner.gnm1.ann1.S6ZM1I Arachis hypogaea HOM05D005790 ORTHO05D007464 7.0e-146 521.2 380 66.6
Sc02g0005160 Simmondsia chinensis HOM05D005790 ORTHO05D007464 9.1e-146 520.8 385 65.5
Thhalv10025433m.g Eutrema salsugineum HOM05D005790 ORTHO05D007464 1.2e-145 520.4 387 63.3
ClCG05G018560 Citrullus lanatus HOM05D005790 ORTHO05D007464 1.6e-145 520.0 415 63.6
AT4G29860 Arabidopsis thaliana HOM05D005790 ORTHO05D007464 2.6e-145 519.2 387 63.3
Haze_22599 Corylus avellana HOM05D005790 ORTHO05D007464 5.9e-145 518.1 496 54.8
Ca_02056_v3 Cicer arietinum L. HOM05D005790 ORTHO05D007464 1.3e-144 516.9 385 66.0
BraA01t00778Z Brassica rapa HOM05D005790 ORTHO05D007464 2.9e-144 515.8 388 64.4
Carub.0004s1477 Capsella rubella HOM05D005790 ORTHO05D007464 5.0e-144 515.0 387 64.1
C01p09340 Brassica napus HOM05D005790 ORTHO05D007464 6.5e-144 514.6 388 63.4
BolC1t00922H Brassica oleracea HOM05D005790 ORTHO05D007464 6.5e-144 514.6 388 63.4
A01p08300 Brassica napus HOM05D005790 ORTHO05D007464 9.4e-143 510.8 388 63.4
Medtr3g113190 Medicago truncatula HOM05D005790 ORTHO05D007464 1.6e-142 510.0 386 64.8
DCAR_017500 Daucus carota HOM05D005790 ORTHO05D007464 2.7e-142 509.2 387 67.4
Nn5g29250 Nelumbo nucifera HOM05D005790 ORTHO05D007464 1.4e-141 506.9 371 66.3
Duzib093G0196 Durio zibethinus HOM05D005790 ORTHO05D007464 3.5e-137 492.3 360 68.1
Peaxi162Scf00085g00528 Petunia axillaris HOM05D005790 ORTHO05D007464 3.2e-135 485.7 382 64.4
ATR0945G002 Amborella trichopoda HOM05D005790 ORTHO05D007464 5.2e-133 478.4 400 59.8
SHI02412 Sapria himalayana HOM05D005790 ORTHO05D007464 6.8e-133 478.0 386 60.4
HanXRQChr02g0043921 Helianthus annuus HOM05D005790 ORTHO05D007464 7.5e-132 474.6 366 64.2
Thecc.08G038500 Theobroma cacao HOM05D005790 ORTHO05D007464 3.7e-131 472.2 387 62.8
THA.LOC104811397 Tarenaya hassleriana HOM05D005790 ORTHO05D007464 1.8e-130 469.9 387 59.4
Migut.D00577 Erythranthe guttata HOM05D005790 ORTHO05D007464 1.6e-126 456.8 386 59.3
SGA_v2.0_scaffold8G04609 Striga asiatica HOM05D005790 ORTHO05D007464 7.5e-124 448.0 385 58.7
Zm00001eb378230 Zea mays HOM05D005790 ORTHO05D007464 2.2e-123 446.4 387 55.3
unitig_26.g10135 Utricularia gibba HOM05D005790 ORTHO05D007464 1.8e-122 443.4 380 56.1
Atru.BG.234.p Acer truncatum HOM05D005790 ORTHO05D007464 1.2e-118 430.6 384 58.9
Sabra09G0000400 Salix brachista HOM05D005790 ORTHO05D007464 2.3e-117 426.4 500 48.2
Lj4A790T66 Lonicera japonica HOM05D005790 ORTHO05D007464 5.2e-117 425.2 305 68.5
CsaV3_UNG233270 Cucumis sativus L. HOM05D005790 ORTHO05D007464 8.9e-117 424.5 378 58.5
Os06g0131100 Oryza sativa ssp. japonica HOM05D005790 ORTHO05D007464 2.0e-116 423.3 386 52.8
FAN27G0896 Fragaria x ananassa HOM05D005790 ORTHO05D007464 5.6e-111 405.2 414 52.4
Ah.05g171860 Amaranthus hybridus HOM05D005790 ORTHO05D007464 1.9e-98 363.6 333 54.7
Actinidia29793 Actinidia chinensis HOM05D005790 ORTHO05D007464 6.6e-96 355.1 411 51.8
Aqoxy4G01228 Aquilegia oxysepala HOM05D005790 ORTHO05D007464 1.6e-94 350.5 282 61.3
Atru.chr13.345 Acer truncatum HOM05D005790 ORTHO05D007464 2.8e-94 349.7 240 67.9
Aa31LG4G5850 Aethionema arabicum HOM05D005790 ORTHO05D007464 1.2e-89 334.3 293 58.0
SMO147G0253 Selaginella moellendorffii HOM05D005790 ORTHO05D007464 1.6e-89 334.0 386 47.2
Mapoly0014s0217 Marchantia polymorpha HOM05D005790 ORTHO05D007464 8.7e-88 328.2 384 46.1
Oeu061776.2 Olea europaea HOM05D005790 ORTHO05D000708 1.2e-84 317.8 363 49.9
SalBow1G3128 Salvia bowleyana HOM05D005790 ORTHO05D007464 4.2e-82 309.3 216 69.0
TPR.G30295 Trifolium pratense HOM05D005790 ORTHO05D007464 3.6e-78 296.2 167 79.0
Nitab4.5_0000402g0120 Nicotiana tabacum HOM05D005790 ORTHO05D007464 1.2e-76 291.2 238 60.9
Pp3c20_12860 Physcomitrium patens HOM05D005790 ORTHO05D007464 1.5e-76 290.8 382 41.6
CDE05G1328 Ceratophyllum demersum HOM05D005790 ORTHO05D007464 5.1e-72 275.8 167 73.1
RcHm_v2.0_Chr6g0302231 Rosa chinensis HOM05D005790 ORTHO05D007464 3.1e-69 266.5 254 55.5
Psat5g014800 Pisum sativum HOM05D005790 ORTHO05D007464 2.9e-67 260.0 242 56.6
Hund17229 Selenicereus undatus HOM05D005790 ORTHO05D007464 7.1e-66 255.4 145 75.9
Psat5g014760 Pisum sativum HOM05D005790 ORTHO05D007464 5.6e-63 245.7 140 77.1
RcHm_v2.0_Chr4g0408871 Rosa chinensis HOM05D005790 ORTHO05D007464 6.0e-57 225.7 384 40.1
MBI09_g08426_MAGBIO Magnolia biondii HOM05D005790 ORTHO05D007464 2.3e-56 223.8 385 37.7
Cpa.g.sc140.27 Carica papaya HOM05D005790 ORTHO05D007464 4.3e-55 219.5 156 63.5
CBR_g7976 Chara braunii HOM05D001993 ORTHO05D004040 8.2e-54 215.3 564 28.9
Nitab4.5_0000402g0130 Nicotiana tabacum HOM05D005790 ORTHO05D007464 1.7e-51 207.6 119 79.8
TWI36G0035 Tripterygium wilfordii HOM05D005790 ORTHO05D007464 2.5e-50 203.8 138 67.4
TPR.G30287 Trifolium pratense HOM05D005790 ORTHO05D007464 3.0e-48 196.8 157 59.9
Gorai.010G006300 Gossypium raimondii HOM05D005790 ORTHO05D007464 1.1e-47 194.9 114 75.4
CBR_g24442 Chara braunii HOM05D005790 ORTHO05D007464 1.5e-44 184.5 254 39.0
SEGI_31412 Sequoiadendron giganteum HOM05D005790 ORTHO05D007464 2.2e-43 180.6 252 42.9
AagrBONN_evm.TU.Sc2ySwM_369.164 Anthoceros agrestis HOM05D005790 ORTHO05D007464 1.4e-40 171.4 272 39.7
RcHm_v2.0_Chr6g0302371 Rosa chinensis HOM05D005790 ORTHO05D007464 7.4e-39 165.6 177 52.0
Aa31LG4G5860 Aethionema arabicum HOM05D005790 ORTHO05D007464 6.3e-38 162.5 99 70.7
Cre02.g076850 Chlamydomonas reinhardtii HOM05D005790 ORTHO05D007464 1.4e-37 161.4 446 28.9
Lj4C790T17 Lonicera japonica HOM05D005790 ORTHO05D007464 4.2e-34 149.8 79 84.8
HPP92_020941 Vanilla planifolia HOM05D005790 ORTHO05D007464 2.6e-28 130.6 176 43.2
Cfa025606 Carpinus fangiana HOM05D005790 ORTHO05D007464 2.2e-27 127.5 373 28.4
MD15G1017900 Malus domestica HOM05D005790 ORTHO05D007464 8.0e-25 119.0 232 35.8
MD15G1018000 Malus domestica HOM05D005790 ORTHO05D007464 8.0e-25 119.0 232 35.8
MCO14G170 Micromonas commoda HOM05D005790 ORTHO05D007464 4.8e-22 109.8 459 25.9
RcHm_v2.0_Chr6g0302301 Rosa chinensis HOM05D005790 ORTHO05D007464 2.2e-19 100.9 61 72.1
Cpa.g.sc140.30 Carica papaya HOM05D005790 ORTHO05D007464 1.9e-18 97.8 54 85.2
PRCOL_00000381 Prasinoderma coloniale HOM05D005790 ORTHO05D007832 1.2e-17 95.1 427 26.2
TAR625G0591 Trochodendron aralioides HOM05D000460 ORTHO05D000333 1.2e-17 95.1 187 36.9
HPP92_020940 Vanilla planifolia HOM05D005790 ORTHO05D007464 1.2e-17 95.1 51 82.4
SEGI_12232 Sequoiadendron giganteum HOM05D005790 ORTHO05D007464 8.8e-16 89.0 57 64.9
Hma1.2p1_1776F.1_g301940 Hydrangea macrophylla HOM05D005790 ORTHO05D007464 2.9e-11 73.9 40 90.0
Thecc.02G185400 Theobroma cacao HOM05D002561 ORTHO05D006466 4.7e-09 66.6 387 23.3
vmacro12361 Vaccinium macrocarpon HOM05D002561 ORTHO05D006466 1.4e-08 65.1 392 24.2
Migut.D00238 Erythranthe guttata HOM05D002561 ORTHO05D006466 2.3e-08 64.3 378 22.2
ECA247G3798 Erigeron canadensis HOM05D000464 ORTHO05D006292 3.0e-08 63.9 349 21.5
Actinidia29794 Actinidia chinensis HOM05D005790 ORTHO05D030850 8.9e-08 62.4 31 77.4
Lsat_1_v5_gn_4_78400 Lactuca sativa HOM05D000464 ORTHO05D006292 8.9e-08 62.4 334 23.7
Cre10.g460100 Chlamydomonas reinhardtii HOM05D010245 ORTHO05D017828 1.5e-07 61.6 92 37.0
CDE05G1505 Ceratophyllum demersum HOM05D005790 ORTHO05D007464 2.6e-07 60.8 41 63.4
VMungo0331G1008 Vigna mungo HOM05D005790 ORTHO05D007464 4.4e-07 60.1 27 81.5
CSS0041467 Camellia sinensis var. sinensis HOM05D000464 ORTHO05D000408 1.3e-06 58.5 340 22.6
COL.COLO4_38433 Corchorus olitorius HOM05D005790 ORTHO05D030850 1.7e-06 58.2 31 64.5
RhsimUnG0148700 Rhododendron simsii HOM05D000113 ORTHO05D002571 2.2e-06 57.8 30 86.7
Sabra17G0011900 Salix brachista HOM05D002561 ORTHO05D006466 2.8e-06 57.4 412 21.8
Eucgr.F02239 Eucalyptus grandis HOM05D003723 ORTHO05D004306 3.7e-06 57.0 95 31.6
Nitab4.5_0004546g0040 Nicotiana tabacum HOM05D002561 ORTHO05D006466 6.3e-06 56.2 382 20.7


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