Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049699 Camellia sinensis var. sinensis HOM05D002943 ORTHO05D002685 1.3e-36 157.5 254 100.0
Dinv26988 Davidia involucrata HOM05D002943 ORTHO05D002685 3.2e-14 83.2 51 84.3
Hma1.2p1_0996F.1_g245920 Hydrangea macrophylla HOM05D002943 ORTHO05D002685 9.3e-14 81.6 59 72.9
Dinv36997 Davidia involucrata HOM05D002943 ORTHO05D002685 4.6e-13 79.3 64 68.8
Actinidia11939 Actinidia chinensis HOM05D002943 ORTHO05D002685 1.0e-12 78.2 64 67.2
ECA238G4010 Erigeron canadensis HOM05D002943 ORTHO05D002685 1.3e-12 77.8 51 72.5
TWI74G1409 Tripterygium wilfordii HOM05D002943 ORTHO05D002685 1.8e-12 77.4 109 71.6
vmacro05467 Vaccinium macrocarpon HOM05D002943 ORTHO05D002685 1.8e-12 77.4 106 81.1
Hund07388 Selenicereus undatus HOM05D002943 ORTHO05D002685 3.0e-12 76.6 105 73.3
ATR0332G110 Amborella trichopoda HOM05D002943 ORTHO05D002685 3.9e-12 76.3 55 72.7
GSVIVG01003702001 Vitis vinifera HOM05D002943 ORTHO05D002685 3.9e-12 76.3 103 75.7
HanXRQChr14g0447041 Helianthus annuus HOM05D002943 ORTHO05D002685 5.1e-12 75.9 49 83.7
Lsat_1_v5_gn_2_81981 Lactuca sativa HOM05D002943 ORTHO05D002685 5.1e-12 75.9 54 72.2
PSO541G4758 Papaver somniferum HOM05D002943 ORTHO05D002685 8.7e-12 75.1 50 72.0
PSO675G4958 Papaver somniferum HOM05D002943 ORTHO05D002685 8.7e-12 75.1 50 72.0
Aqoxy5G01866 Aquilegia oxysepala HOM05D002943 ORTHO05D002685 1.1e-11 74.7 54 72.2
Nitab4.5_0000093g0160 Nicotiana tabacum HOM05D002943 ORTHO05D002685 3.3e-11 73.2 52 75.0
Nitab4.5_0000396g0220 Nicotiana tabacum HOM05D002943 ORTHO05D002685 4.3e-11 72.8 52 75.0
Rhsim10G0085400 Rhododendron simsii HOM05D002943 ORTHO05D002685 5.6e-11 72.4 52 75.0
Sopen02g036370 Solanum pennellii HOM05D002943 ORTHO05D002685 5.6e-11 72.4 54 70.4
Lj4g0007346 Lotus japonicus HOM05D002943 ORTHO05D002685 7.4e-11 72.0 61 62.3
TAR628G0306 Trochodendron aralioides HOM05D002943 ORTHO05D002685 7.4e-11 72.0 46 78.3
Nn1g05949 Nelumbo nucifera HOM05D002943 ORTHO05D002685 9.6e-11 71.6 41 80.5
SEGI_40787 Sequoiadendron giganteum HOM05D002943 ORTHO05D002685 9.6e-11 71.6 42 81.0
Thecc.01G081600 Theobroma cacao HOM05D002943 ORTHO05D002685 9.6e-11 71.6 99 72.7
TWI53G1603 Tripterygium wilfordii HOM05D002943 ORTHO05D002685 9.6e-11 71.6 108 73.1
TAR376G1143 Trochodendron aralioides HOM05D002943 ORTHO05D002685 1.6e-10 70.9 42 81.0
ClCG01G018070 Citrullus lanatus HOM05D002943 ORTHO05D002685 2.1e-10 70.5 95 75.8
Solyc02g091790.3 Solanum lycopersicum HOM05D002943 ORTHO05D002685 2.8e-10 70.1 52 71.2
PGSC0003DMG401030621 Solanum tuberosum HOM05D002943 ORTHO05D002685 2.8e-10 70.1 52 71.2
Migut.H00305 Erythranthe guttata HOM05D002943 ORTHO05D002685 3.6e-10 69.7 95 73.7
Oeu025000.1 Olea europaea HOM05D002943 ORTHO05D002685 3.6e-10 69.7 44 77.3
COL.COLO4_11661 Corchorus olitorius HOM05D002943 ORTHO05D002685 4.8e-10 69.3 96 75.0
Manes.12G119800 Manihot esculenta HOM05D002943 ORTHO05D002685 4.8e-10 69.3 110 66.4
Peaxi162Scf00939g00121 Petunia axillaris HOM05D002943 ORTHO05D002685 4.8e-10 69.3 43 76.7
CsaV3_6G044600 Cucumis sativus L. HOM05D002943 ORTHO05D002685 6.2e-10 68.9 95 73.7
Cc07_g07680 Coffea canephora HOM05D002943 ORTHO05D002685 8.1e-10 68.6 54 70.4
Sc09g0001310 Simmondsia chinensis HOM05D002943 ORTHO05D002685 1.1e-09 68.2 56 66.1
CDE06G1770 Ceratophyllum demersum HOM05D002943 ORTHO05D002685 1.4e-09 67.8 52 69.2
Duzib187G0476 Durio zibethinus HOM05D002943 ORTHO05D002685 1.4e-09 67.8 96 72.9
CANSAT01G2837 Cannabis sativa HOM05D002943 ORTHO05D002685 1.8e-09 67.4 106 67.9
unitig_0.g486 Utricularia gibba HOM05D002943 ORTHO05D002685 1.8e-09 67.4 52 69.2
DCAR_017974 Daucus carota HOM05D002943 ORTHO05D002685 2.4e-09 67.0 47 68.1
arahy.Tifrunner.gnm1.ann1.DT5KC6 Arachis hypogaea HOM05D002943 ORTHO05D002685 3.1e-09 66.6 102 42.2
arahy.Tifrunner.gnm1.ann1.MJC5Q8 Arachis hypogaea HOM05D002943 ORTHO05D002685 3.1e-09 66.6 102 42.2
arahy.Tifrunner.gnm1.ann1.RFJS66 Arachis hypogaea HOM05D002943 ORTHO05D002685 3.1e-09 66.6 102 42.2
CDE04G2187 Ceratophyllum demersum HOM05D002943 ORTHO05D002685 3.1e-09 66.6 48 72.9
MBI16_g14668_MAGBIO Magnolia biondii HOM05D002943 ORTHO05D002685 3.1e-09 66.6 55 67.3
SalBow3G3920 Salvia bowleyana HOM05D002943 ORTHO05D002685 3.1e-09 66.6 95 72.6
TPR.G3207 Trifolium pratense HOM05D002943 ORTHO05D002685 4.0e-09 66.2 57 61.4
Haze_03949 Corylus avellana HOM05D002943 ORTHO05D002685 5.3e-09 65.9 97 73.2
Medtr4g119620 Medicago truncatula HOM05D002943 ORTHO05D002685 5.3e-09 65.9 57 61.4
Phvul.003G104000 Phaseolus vulgaris HOM05D002943 ORTHO05D002685 5.3e-09 65.9 108 40.7
SMO119G0268 Selaginella moellendorffii HOM05D002943 ORTHO05D002685 5.3e-09 65.9 48 66.7
VMungo1215G0795 Vigna mungo HOM05D002943 ORTHO05D002685 5.3e-09 65.9 108 40.7
CiPaw.07G041100 Carya illinoinensis HOM05D002943 ORTHO05D002685 6.9e-09 65.5 101 71.3
Ca_14440_v3 Cicer arietinum L. HOM05D002943 ORTHO05D002685 9.0e-09 65.1 49 69.4
Cpa.g.sc129.34 Carica papaya HOM05D002943 ORTHO05D002685 1.2e-08 64.7 48 68.8
DCAR_010766 Daucus carota HOM05D000670 ORTHO05D002685 1.2e-08 64.7 45 66.7
Eucgr.H02400 Eucalyptus grandis HOM05D002943 ORTHO05D002685 1.5e-08 64.3 55 63.6
SGA_v2.0_scaffold121G33104 Striga asiatica HOM05D002943 ORTHO05D002685 1.5e-08 64.3 95 72.6
EL10Ac4g10037 Beta vulgaris HOM05D002943 ORTHO05D002685 2.0e-08 63.9 46 73.9
Lj2C426T11 Lonicera japonica HOM05D002943 ORTHO05D002685 2.0e-08 63.9 45 73.3
Lalb_Chr07g0177661 Lupinus albus HOM05D002943 ORTHO05D002685 2.0e-08 63.9 49 65.3
Sed0027180 Sechium edule HOM05D002943 ORTHO05D002685 2.0e-08 63.9 52 65.4
HPP92_017535 Vanilla planifolia HOM05D002943 ORTHO05D002685 2.0e-08 63.9 47 66.0
Gohir.D11G212900 Gossypium hirsutum HOM05D002943 ORTHO05D002685 2.6e-08 63.5 97 70.1
Gorai.007G228800 Gossypium raimondii HOM05D002943 ORTHO05D002685 2.6e-08 63.5 97 70.1
Psat0s2006g0120 Pisum sativum HOM05D002943 ORTHO05D002685 2.6e-08 63.5 57 59.6
Duzib147G1423 Durio zibethinus HOM05D002943 ORTHO05D002685 3.4e-08 63.2 105 63.8
Gohir.A11G210200 Gossypium hirsutum HOM05D002943 ORTHO05D002685 3.4e-08 63.2 97 70.1
PGR031G0631 Punica granatum HOM05D002943 ORTHO05D002685 3.4e-08 63.2 66 57.6
Cfa006809 Carpinus fangiana HOM05D002943 ORTHO05D002685 4.5e-08 62.8 97 71.1
Atru.chr3.1120 Acer truncatum HOM05D002943 ORTHO05D002685 5.8e-08 62.4 40 75.0
PGR044G0058 Punica granatum HOM05D002943 ORTHO05D002685 5.8e-08 62.4 56 60.7
THA.LOC104798430 Tarenaya hassleriana HOM05D002943 ORTHO05D002685 5.8e-08 62.4 109 65.1
Prupe.6G211800 Prunus persica HOM05D002943 ORTHO05D002685 7.6e-08 62.0 57 63.2
HPP92_020621 Vanilla planifolia HOM05D002943 ORTHO05D002685 7.6e-08 62.0 42 69.0
DCAR_005275 Daucus carota HOM05D002943 ORTHO05D002685 9.9e-08 61.6 45 66.7
FvH4_1g18760 Fragaria vesca HOM05D002943 ORTHO05D002685 1.3e-07 61.2 51 66.7
FAN19G1191 Fragaria x ananassa HOM05D002943 ORTHO05D002685 1.3e-07 61.2 51 66.7
QL06p037843 Quercus lobata HOM05D002943 ORTHO05D002685 1.3e-07 61.2 49 69.4
HPP92_012269 Vanilla planifolia HOM05D002943 ORTHO05D002685 1.3e-07 61.2 41 73.2
Glyma.07G248900 Glycine max HOM05D002943 ORTHO05D002685 1.7e-07 60.8 107 39.3
Pp3c14_5700 Physcomitrium patens HOM05D009278 ORTHO05D002685 1.7e-07 60.8 42 66.7
Sabra07G0007300 Salix brachista HOM05D002943 ORTHO05D002685 1.7e-07 60.8 106 66.0
Dinv34766 Davidia involucrata HOM05D002943 ORTHO05D002685 2.2e-07 60.5 45 64.4
FAN28G1172 Fragaria x ananassa HOM05D002943 ORTHO05D002685 2.2e-07 60.5 49 63.3
Glyma.17G025400 Glycine max HOM05D002943 ORTHO05D002685 2.2e-07 60.5 54 61.1
RcHm_v2.0_Chr2g0109631 Rosa chinensis HOM05D002943 ORTHO05D002685 2.2e-07 60.5 49 65.3
TAR365G0759 Trochodendron aralioides HOM05D002943 ORTHO05D002685 2.2e-07 60.5 45 64.4
AagrBONN_evm.TU.Sc2ySwM_362.2759 Anthoceros agrestis HOM05D002943 ORTHO05D002685 2.9e-07 60.1 42 64.3
AT4G02730 Arabidopsis thaliana HOM05D002943 ORTHO05D002685 2.9e-07 60.1 47 61.7
Ciclev10026097m.g Citrus clementina HOM05D002943 ORTHO05D002685 2.9e-07 60.1 48 68.8
FAN23G1457 Fragaria x ananassa HOM05D002943 ORTHO05D002685 2.9e-07 60.1 48 68.8
Lalb_Chr21g0306431 Lupinus albus HOM05D002943 ORTHO05D002685 2.9e-07 60.1 59 59.3
Lalb_Chr13g0303681 Lupinus albus HOM05D002943 ORTHO05D002685 3.8e-07 59.7 45 64.4
QL12p021366 Quercus lobata HOM05D002943 ORTHO05D002685 3.8e-07 59.7 44 65.9
SHI12121 Sapria himalayana HOM05D002943 ORTHO05D002685 3.8e-07 59.7 99 66.7
AUR62006609 Chenopodium quinoa HOM05D002943 ORTHO05D002685 4.9e-07 59.3 43 72.1
Nn4g26296 Nelumbo nucifera HOM05D002943 ORTHO05D002685 4.9e-07 59.3 43 65.1
AL6G50270 Arabidopsis lyrata HOM05D002943 ORTHO05D002685 6.4e-07 58.9 47 59.6
Carub.0006s3437 Capsella rubella HOM05D002943 ORTHO05D002685 6.4e-07 58.9 47 59.6
CDE05G3340 Ceratophyllum demersum HOM05D002943 ORTHO05D002685 6.4e-07 58.9 46 60.9
Thhalv10028762m.g Eutrema salsugineum HOM05D002943 ORTHO05D002685 6.4e-07 58.9 47 59.6
MBI04_g36449_MAGBIO Magnolia biondii HOM05D002943 ORTHO05D002685 6.4e-07 58.9 55 56.4
Manes.01G207000 Manihot esculenta HOM05D002943 ORTHO05D002685 6.4e-07 58.9 47 61.7
Medtr1g072140 Medicago truncatula HOM05D002943 ORTHO05D002685 6.4e-07 58.9 59 55.9
Os03g0725400 Oryza sativa ssp. japonica HOM05D002943 ORTHO05D002685 6.4e-07 58.9 45 62.2
Potri.007G009500 Populus trichocarpa HOM05D002943 ORTHO05D002685 6.4e-07 58.9 106 64.2
Sp6g02690 Schrenkiella parvula HOM05D002943 ORTHO05D002685 6.4e-07 58.9 47 59.6
AUR62000261 Chenopodium quinoa HOM05D002943 ORTHO05D002685 8.4e-07 58.5 43 72.1
Potri.005G148500 Populus trichocarpa HOM05D002943 ORTHO05D002685 8.4e-07 58.5 45 68.9
Thecc.01G277000 Theobroma cacao HOM05D002943 ORTHO05D002685 8.4e-07 58.5 60 51.7
TWI59G0374 Tripterygium wilfordii HOM05D002943 ORTHO05D002685 8.4e-07 58.5 44 61.4
BcaB05g23663 Brassica carinata HOM05D002943 ORTHO05D002685 1.1e-06 58.2 47 59.6
Mapoly0035s0097 Marchantia polymorpha HOM05D002943 ORTHO05D002685 1.1e-06 58.2 43 65.1
Pp3c2_20770 Physcomitrium patens HOM05D009278 ORTHO05D002685 1.1e-06 58.2 41 70.7
CARHR251070 Cardamine hirsuta HOM05D002943 ORTHO05D002685 1.4e-06 57.8 47 59.6
Eucgr.K03366 Eucalyptus grandis HOM05D002943 ORTHO05D002685 1.4e-06 57.8 56 57.1
SGA_v2.0_scaffold1G00490 Striga asiatica HOM05D002943 ORTHO05D002685 1.4e-06 57.8 45 62.2
Ciclev10021263m.g Citrus clementina HOM05D002943 ORTHO05D002685 1.9e-06 57.4 47 59.6
SGA_v2.0_scaffold138G35332 Striga asiatica HOM05D002943 ORTHO05D002685 1.9e-06 57.4 45 62.2
Ah.06g195170 Amaranthus hybridus HOM05D002943 ORTHO05D002685 2.4e-06 57.0 48 64.6
EL10Ac5g10558 Beta vulgaris HOM05D002943 ORTHO05D002685 2.4e-06 57.0 45 60.0
Carub.0005s1601 Capsella rubella HOM05D002943 ORTHO05D002685 2.4e-06 57.0 97 68.0
CARHR158730 Cardamine hirsuta HOM05D002943 ORTHO05D002685 2.4e-06 57.0 97 68.0
COL.COLO4_09075 Corchorus olitorius HOM05D002943 ORTHO05D002685 2.4e-06 57.0 53 58.5
Zm00001eb055840 Zea mays HOM05D002943 ORTHO05D002685 2.4e-06 57.0 41 63.4
Cfa006157 Carpinus fangiana HOM05D002943 ORTHO05D002685 3.2e-06 56.6 56 55.4
Gohir.A08G045160 Gossypium hirsutum HOM05D002943 ORTHO05D002685 3.2e-06 56.6 53 58.5
Gohir.D08G055200 Gossypium hirsutum HOM05D002943 ORTHO05D002685 3.2e-06 56.6 53 58.5
Gorai.004G055700 Gossypium raimondii HOM05D002943 ORTHO05D002685 3.2e-06 56.6 53 58.5
MD01G1047000 Malus domestica HOM05D002943 ORTHO05D002685 3.2e-06 56.6 49 61.2
MD16G1282400 Malus domestica HOM05D002943 ORTHO05D002685 3.2e-06 56.6 49 61.2
Pp3c10_4790 Physcomitrium patens HOM05D009278 ORTHO05D002685 3.2e-06 56.6 42 64.3
Prupe.8G239500 Prunus persica HOM05D002943 ORTHO05D002685 3.2e-06 56.6 49 53.1
Atru.chr5.1459 Acer truncatum HOM05D002943 ORTHO05D002685 4.2e-06 56.2 53 58.5
CSS0015908 Camellia sinensis var. sinensis HOM05D002943 ORTHO05D002685 4.2e-06 56.2 42 61.9
ClCG09G007120 Citrullus lanatus HOM05D002943 ORTHO05D002685 4.2e-06 56.2 44 61.4
CsaV3_7G028040 Cucumis sativus L. HOM05D002943 ORTHO05D002685 4.2e-06 56.2 44 61.4
Hma1.2p1_0667F.1_g199660 Hydrangea macrophylla HOM05D002943 ORTHO05D002685 4.2e-06 56.2 45 60.0
Thhalv10010551m.g Eutrema salsugineum HOM05D002943 ORTHO05D002685 5.5e-06 55.8 47 61.7
FvH4_2g23370 Fragaria vesca HOM05D002943 ORTHO05D002685 5.5e-06 55.8 47 55.3
Duzib138G1878 Durio zibethinus HOM05D002943 ORTHO05D002685 7.1e-06 55.5 51 51.0
SEGI_07764 Sequoiadendron giganteum HOM05D002943 ORTHO05D002685 7.1e-06 55.5 51 49.0
Cpa.g.sc52.53 Carica papaya HOM05D002943 ORTHO05D002685 9.3e-06 55.1 44 59.1
Haze_04694 Corylus avellana HOM05D002943 ORTHO05D002685 9.3e-06 55.1 56 51.8
MELO3C015824.2 Cucumis melo HOM05D002943 ORTHO05D002685 9.3e-06 55.1 44 59.1
Lj5g0020766 Lotus japonicus HOM05D002943 ORTHO05D002685 9.3e-06 55.1 50 52.0
Potri.002G051900 Populus trichocarpa HOM05D002943 ORTHO05D002685 9.3e-06 55.1 56 53.6
THA.LOC104815938 Tarenaya hassleriana HOM05D002943 ORTHO05D002685 9.3e-06 55.1 46 58.7


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