Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048252 Camellia sinensis var. sinensis HOM05D001447 ORTHO05D008204 3.4e-160 568.5 349 100.0
CSS0026907 Camellia sinensis var. sinensis HOM05D001447 ORTHO05D008204 2.1e-133 479.6 343 91.0
vmacro04117 Vaccinium macrocarpon HOM05D001447 ORTHO05D008204 1.7e-130 469.9 343 89.5
Rhsim13G0217100 Rhododendron simsii HOM05D001447 ORTHO05D008204 3.7e-130 468.8 343 89.2
TAR623G0906 Trochodendron aralioides HOM05D001447 ORTHO05D008204 4.1e-129 465.3 343 87.2
ClCG02G023020 Citrullus lanatus HOM05D001447 ORTHO05D008204 5.9e-128 461.5 343 86.9
CiPaw.13G153500 Carya illinoinensis HOM05D001447 ORTHO05D008204 1.0e-127 460.7 343 88.6
QL01p018045 Quercus lobata HOM05D001447 ORTHO05D008204 1.3e-127 460.3 343 85.1
GSVIVG01031555001 Vitis vinifera HOM05D001447 ORTHO05D008204 1.3e-127 460.3 343 86.6
THA.LOC104826486 Tarenaya hassleriana HOM05D001447 ORTHO05D008204 1.7e-127 459.9 344 87.2
Ah.06g194360 Amaranthus hybridus HOM05D001447 ORTHO05D008204 3.8e-127 458.8 343 87.8
Atru.chr3.2626 Acer truncatum HOM05D001447 ORTHO05D008204 6.5e-127 458.0 346 87.3
Ciclev10014361m.g Citrus clementina HOM05D001447 ORTHO05D008204 6.5e-127 458.0 343 88.0
CsaV3_6G039120 Cucumis sativus L. HOM05D001447 ORTHO05D008204 8.5e-127 457.6 343 86.3
MELO3C014571.2 Cucumis melo HOM05D001447 ORTHO05D008204 1.1e-126 457.2 343 86.3
LjContig00222g0003711 Lotus japonicus HOM05D001447 ORTHO05D008204 1.1e-126 457.2 354 85.9
Dinv36207 Davidia involucrata HOM05D001447 ORTHO05D008204 1.5e-126 456.8 343 88.3
Nn2g15047 Nelumbo nucifera HOM05D001447 ORTHO05D008204 1.9e-126 456.4 343 84.8
CANSAT54G2932 Cannabis sativa HOM05D001447 ORTHO05D008204 3.2e-126 455.7 352 84.9
Eucgr.J00729 Eucalyptus grandis HOM05D001447 ORTHO05D008204 3.2e-126 455.7 343 87.2
Hma1.2p1_1043F.1_g251240 Hydrangea macrophylla HOM05D001447 ORTHO05D008204 3.2e-126 455.7 343 87.5
Cpa.g.sc84.7 Carica papaya HOM05D001447 ORTHO05D008204 4.2e-126 455.3 343 87.5
TWI39G0518 Tripterygium wilfordii HOM05D001447 ORTHO05D008204 5.5e-126 454.9 349 87.1
Ca_24494_v3 Cicer arietinum L. HOM05D001447 ORTHO05D008204 7.2e-126 454.5 284 87.0
Duzib150G1307 Durio zibethinus HOM05D001447 ORTHO05D008204 7.2e-126 454.5 358 84.1
Medtr5g009070 Medicago truncatula HOM05D001447 ORTHO05D008204 7.2e-126 454.5 348 86.5
Prupe.4G257100 Prunus persica HOM05D001447 ORTHO05D008204 7.2e-126 454.5 346 84.1
Thecc.09G241300 Theobroma cacao HOM05D001447 ORTHO05D008204 9.5e-126 454.1 343 86.3
Hund21994 Selenicereus undatus HOM05D001447 ORTHO05D008204 1.2e-125 453.8 347 86.2
Aqoxy2G00279 Aquilegia oxysepala HOM05D001447 ORTHO05D008204 1.6e-125 453.4 350 83.4
arahy.Tifrunner.gnm1.ann1.FM4RDW Arachis hypogaea HOM05D001447 ORTHO05D008204 1.6e-125 453.4 343 86.9
Potri.009G049400 Populus trichocarpa HOM05D001447 ORTHO05D008204 1.6e-125 453.4 343 87.2
Glyma.11G016000 Glycine max HOM05D001447 ORTHO05D008204 2.1e-125 453.0 343 87.2
Gohir.D08G021000 Gossypium hirsutum HOM05D001447 ORTHO05D008204 2.1e-125 453.0 343 87.5
Gorai.004G015600 Gossypium raimondii HOM05D001447 ORTHO05D008204 2.1e-125 453.0 343 87.5
arahy.Tifrunner.gnm1.ann1.PC9ITH Arachis hypogaea HOM05D001447 ORTHO05D008204 3.6e-125 452.2 343 86.6
Oeu043288.1 Olea europaea HOM05D001447 ORTHO05D008204 3.6e-125 452.2 344 86.9
Psat0s3604g0040 Pisum sativum HOM05D001447 ORTHO05D008204 3.6e-125 452.2 346 86.4
TPR.G37864 Trifolium pratense HOM05D001447 ORTHO05D008204 3.6e-125 452.2 346 87.0
VMungo1215G0901 Vigna mungo HOM05D001447 ORTHO05D008204 3.6e-125 452.2 343 86.9
COL.COLO4_36486 Corchorus olitorius HOM05D001312 ORTHO05D008204 1.4e-124 450.3 344 86.6
Glyma.01G226700 Glycine max HOM05D001447 ORTHO05D008204 1.4e-124 450.3 343 86.3
Gohir.A08G010700 Gossypium hirsutum HOM05D001447 ORTHO05D008204 1.4e-124 450.3 343 87.2
DCAR_002090 Daucus carota HOM05D001447 ORTHO05D008204 3.0e-124 449.1 284 85.6
Lsat_1_v5_gn_2_111701 Lactuca sativa HOM05D001447 ORTHO05D008204 3.0e-124 449.1 347 86.2
Zm00001eb212250 Zea mays HOM05D001447 ORTHO05D008204 3.0e-124 449.1 351 84.6
Cfa009826 Carpinus fangiana HOM05D001447 ORTHO05D008204 4.0e-124 448.7 283 86.9
Sed0024633 Sechium edule HOM05D001447 ORTHO05D008204 5.2e-124 448.4 344 85.8
FvH4_3g28280 Fragaria vesca HOM05D001447 ORTHO05D008204 1.5e-123 446.8 350 84.9
FAN11G0169 Fragaria x ananassa HOM05D001447 ORTHO05D008204 1.5e-123 446.8 350 84.9
Lalb_Chr09g0320581 Lupinus albus HOM05D001447 ORTHO05D008204 2.0e-123 446.4 345 85.8
MD03G1170000 Malus domestica HOM05D001447 ORTHO05D008204 2.0e-123 446.4 351 80.9
Haze_23186 Corylus avellana HOM05D001447 ORTHO05D008204 2.6e-123 446.0 283 86.2
RcHm_v2.0_Chr5g0051161 Rosa chinensis HOM05D001447 ORTHO05D008204 4.4e-123 445.3 350 85.1
PGR119G1003 Punica granatum HOM05D001447 ORTHO05D008204 1.3e-122 443.7 343 86.0
Os03g0811100 Oryza sativa ssp. japonica HOM05D001447 ORTHO05D008204 2.2e-122 443.0 346 85.0
FAN16G0520 Fragaria x ananassa HOM05D001447 ORTHO05D008204 3.7e-122 442.2 350 84.9
FAN21G0684 Fragaria x ananassa HOM05D001312 ORTHO05D008204 3.7e-122 442.2 350 84.9
Peaxi162Scf01713g00016 Petunia axillaris HOM05D001447 ORTHO05D008204 3.7e-122 442.2 284 85.2
ECA238G0809 Erigeron canadensis HOM05D001447 ORTHO05D008204 4.9e-122 441.8 350 84.9
FAN25G0409 Fragaria x ananassa HOM05D001447 ORTHO05D008204 6.3e-122 441.4 349 84.8
Phvul.002G165600 Phaseolus vulgaris HOM05D001447 ORTHO05D008204 6.3e-122 441.4 343 86.3
SalBow6G0254 Salvia bowleyana HOM05D001447 ORTHO05D008204 8.3e-122 441.0 347 82.4
HanXRQChr14g0453731 Helianthus annuus HOM05D001447 ORTHO05D008204 1.1e-121 440.7 349 82.2
Nitab4.5_0001663g0090 Nicotiana tabacum HOM05D001447 ORTHO05D008204 1.1e-121 440.7 348 85.1
MSTRG.18450 Avicennia marina HOM05D001447 ORTHO05D008204 1.4e-121 440.3 343 85.4
A06p05510 Brassica napus HOM05D001447 ORTHO05D008204 1.8e-121 439.9 349 85.1
AUR62039844 Chenopodium quinoa HOM05D001447 ORTHO05D008204 1.8e-121 439.9 284 83.5
Cc01_g06000 Coffea canephora HOM05D001447 ORTHO05D008204 1.8e-121 439.9 343 83.1
Solyc04g015490.4 Solanum lycopersicum HOM05D001447 ORTHO05D008204 2.4e-121 439.5 350 83.7
Sopen04g007560 Solanum pennellii HOM05D001447 ORTHO05D008204 2.4e-121 439.5 350 84.3
BcaB07g34095 Brassica carinata HOM05D001447 ORTHO05D008204 3.1e-121 439.1 348 85.1
C05p06620 Brassica napus HOM05D001447 ORTHO05D008204 3.1e-121 439.1 348 85.1
BolC5t29422H Brassica oleracea HOM05D001447 ORTHO05D008204 3.1e-121 439.1 348 85.1
Migut.N02358 Erythranthe guttata HOM05D001447 ORTHO05D008204 3.1e-121 439.1 283 84.1
PSO384G0341 Papaver somniferum HOM05D001447 ORTHO05D008204 3.1e-121 439.1 355 79.7
BraA06t23759Z Brassica rapa HOM05D001447 ORTHO05D008204 4.1e-121 438.7 349 84.8
AT1G08520 Arabidopsis thaliana HOM05D001447 ORTHO05D008204 5.4e-121 438.3 284 84.5
AUR62000167 Chenopodium quinoa HOM05D001447 ORTHO05D008204 5.4e-121 438.3 284 84.2
Carub.0001s0788 Capsella rubella HOM05D001447 ORTHO05D008204 9.2e-121 437.6 346 84.7
CAN.G676.47 Capsicum annuum HOM05D001447 ORTHO05D008204 1.2e-120 437.2 348 84.2
Thhalv10006894m.g Eutrema salsugineum HOM05D001447 ORTHO05D008204 1.2e-120 437.2 284 84.5
PSO339G2769 Papaver somniferum HOM05D001447 ORTHO05D008204 1.2e-120 437.2 284 83.8
HPP92_003245 Vanilla planifolia HOM05D001447 ORTHO05D008204 1.2e-120 437.2 343 82.5
ATR0721G176 Amborella trichopoda HOM05D001447 ORTHO05D008204 2.0e-120 436.4 346 82.9
Sp1g07180 Schrenkiella parvula HOM05D001447 ORTHO05D008204 2.7e-120 436.0 349 84.5
AL1G18950 Arabidopsis lyrata HOM05D001447 ORTHO05D008204 3.5e-120 435.6 284 83.8
Hma1.2p1_1043F.1_g251250 Hydrangea macrophylla HOM05D001447 ORTHO05D008204 7.3e-118 427.9 290 82.1
Aa31sc55G60 Aethionema arabicum HOM05D001447 ORTHO05D008204 9.5e-118 427.6 345 82.9
Nitab4.5_0000733g0210 Nicotiana tabacum HOM05D001447 ORTHO05D008204 3.0e-116 422.5 274 85.4
MBI13_g04765_MAGBIO Magnolia biondii HOM05D001447 ORTHO05D008204 5.4e-113 411.8 343 78.1
SMO141G0042 Selaginella moellendorffii HOM05D001447 ORTHO05D008204 7.8e-112 407.9 286 78.3
AagrBONN_evm.TU.Sc2ySwM_228.1203 Anthoceros agrestis HOM05D001447 ORTHO05D008204 2.8e-109 399.4 286 75.9
Lj1A305G18 Lonicera japonica HOM05D001447 ORTHO05D008204 1.4e-108 397.1 256 85.2
Mapoly0034s0094 Marchantia polymorpha HOM05D001447 ORTHO05D008204 1.4e-108 397.1 284 75.0
Pp3c15_25050 Physcomitrium patens HOM05D001447 ORTHO05D008204 8.9e-108 394.4 286 74.8
Actinidia06934 Actinidia chinensis HOM05D001447 ORTHO05D008204 9.2e-105 384.4 302 85.8
CBR_g18769 Chara braunii HOM05D001447 ORTHO05D008204 1.6e-104 383.6 286 70.3
EL10Ac4g10183 Beta vulgaris HOM05D001447 ORTHO05D008204 3.9e-95 352.4 300 69.7
PRCOL_00004019 Prasinoderma coloniale HOM05D001447 ORTHO05D008204 1.0e-87 327.8 289 64.0
EL10Ac4g10182 Beta vulgaris HOM05D001447 ORTHO05D008204 2.3e-87 326.6 260 73.5
Cre05.g242000 Chlamydomonas reinhardtii HOM05D001447 ORTHO05D008204 5.1e-87 325.5 288 61.5
MCO04G050 Micromonas commoda HOM05D001447 ORTHO05D008204 9.9e-83 311.2 285 59.3
MD11G1187400 Malus domestica HOM05D001447 ORTHO05D008204 4.8e-69 265.8 157 88.5
TAR383G0171 Trochodendron aralioides HOM05D001447 ORTHO05D008204 9.6e-62 241.5 142 88.7
SEGI_28588 Sequoiadendron giganteum HOM05D001447 ORTHO05D008204 3.8e-58 229.6 139 84.9
Manes.14G005700 Manihot esculenta HOM05D001447 ORTHO05D008204 6.7e-55 218.8 223 78.9
Sc16g0011190 Simmondsia chinensis HOM05D001447 ORTHO05D008204 1.3e-53 214.5 207 79.7
MCO16G689 Micromonas commoda HOM05D001447 ORTHO05D008204 5.9e-51 205.7 277 46.9
Sc16g0011200 Simmondsia chinensis HOM05D001447 ORTHO05D008204 1.6e-48 197.6 118 88.1
SEGI_25456 Sequoiadendron giganteum HOM05D001447 ORTHO05D008204 2.8e-29 133.7 171 70.8
SGA_v2.0_scaffold3G01472 Striga asiatica HOM05D001447 ORTHO05D008204 3.4e-14 83.6 42 100.0
SEGI_14967 Sequoiadendron giganteum HOM05D001447 ORTHO05D008204 1.7e-13 81.3 43 90.7
CARHR008420 Cardamine hirsuta HOM05D001447 ORTHO05D008204 1.0e-10 72.0 40 82.5


User provided reference genes

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