Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047685 Camellia sinensis var. sinensis HOM05D006444 ORTHO05D007748 6.9e-190 667.2 339 100.0
Dinv30860 Davidia involucrata HOM05D006444 ORTHO05D007748 1.0e-137 493.8 339 73.5
Rhsim11G0093000 Rhododendron simsii HOM05D006444 ORTHO05D007748 1.0e-129 467.2 337 70.9
vmacro01541 Vaccinium macrocarpon HOM05D006444 ORTHO05D007748 2.9e-127 459.1 337 70.3
Haze_04092 Corylus avellana HOM05D006444 ORTHO05D007748 1.1e-121 440.7 337 65.3
GSVIVG01031202001 Vitis vinifera HOM05D006444 ORTHO05D007748 1.1e-118 430.6 334 65.0
Hma1.2p1_0472F.1_g159820 Hydrangea macrophylla HOM05D006444 ORTHO05D007748 5.4e-110 401.7 352 61.6
Sabra05G0026600 Salix brachista HOM05D006444 ORTHO05D007748 9.2e-110 401.0 334 61.1
Manes.09G174800 Manihot esculenta HOM05D006444 ORTHO05D007748 4.6e-109 398.7 338 60.4
Medtr7g112320 Medicago truncatula HOM05D006444 ORTHO05D007748 7.8e-109 397.9 339 59.0
TAR365G0240 Trochodendron aralioides HOM05D006444 ORTHO05D007748 1.0e-108 397.5 359 57.9
Thecc.05G319500 Theobroma cacao HOM05D006444 ORTHO05D007748 1.3e-108 397.1 340 60.6
Ciclev10001747m.g Citrus clementina HOM05D006444 ORTHO05D007748 2.3e-108 396.4 338 62.1
Potri.005G020600 Populus trichocarpa HOM05D006444 ORTHO05D007748 3.9e-108 395.6 334 60.5
COL.COLO4_04127 Corchorus olitorius HOM05D006444 ORTHO05D007748 1.5e-107 393.7 336 60.4
CiPaw.07G026800 Carya illinoinensis HOM05D006444 ORTHO05D007748 2.0e-104 383.3 323 60.1
QL03p017976 Quercus lobata HOM05D006444 ORTHO05D007748 7.6e-104 381.3 335 59.7
Gohir.A08G207200 Gossypium hirsutum HOM05D006444 ORTHO05D007748 1.3e-103 380.6 337 59.1
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 6.4e-103 378.3 330 57.6
PGR031G3221 Punica granatum HOM05D006444 ORTHO05D007748 1.9e-102 376.7 339 56.6
ClCG03G017520 Citrullus lanatus HOM05D006444 ORTHO05D007748 2.1e-101 373.2 335 58.8
Gorai.004G237700 Gossypium raimondii HOM05D006444 ORTHO05D007748 2.1e-101 373.2 337 57.9
TPR.G1652 Trifolium pratense HOM05D006444 ORTHO05D007748 1.0e-100 370.9 339 56.6
Cpa.g.sc48.132 Carica papaya HOM05D006444 ORTHO05D007748 2.3e-100 369.8 382 51.6
Gohir.D08G223800 Gossypium hirsutum HOM05D006444 ORTHO05D007748 2.3e-100 369.8 337 57.6
Eucgr.H03280 Eucalyptus grandis HOM05D006444 ORTHO05D007748 1.1e-99 367.5 339 56.3
arahy.Tifrunner.gnm1.ann1.I0464U Arachis hypogaea HOM05D006444 ORTHO05D007748 4.3e-99 365.5 337 56.4
Cc10_g14110 Coffea canephora HOM05D006444 ORTHO05D007748 5.6e-99 365.2 335 58.5
Prupe.6G316100 Prunus persica HOM05D006444 ORTHO05D007748 2.8e-98 362.8 338 57.4
arahy.Tifrunner.gnm1.ann1.T18680 Arachis hypogaea HOM05D006444 ORTHO05D007748 1.1e-97 360.9 337 55.8
Ca_09322_v3 Cicer arietinum L. HOM05D006444 ORTHO05D007748 5.3e-97 358.6 337 55.8
Lj5A342G70 Lonicera japonica HOM05D006444 ORTHO05D007748 1.5e-96 357.1 281 64.8
EL10Ac4g09842 Beta vulgaris HOM05D006444 ORTHO05D007748 1.3e-95 354.0 341 55.1
Glyma.19G230000 Glycine max HOM05D006444 ORTHO05D007748 2.2e-95 353.2 337 55.5
Nitab4.5_0014337g0020 Nicotiana tabacum HOM05D006444 ORTHO05D007748 2.2e-95 353.2 340 55.0
Sed0009356 Sechium edule HOM05D006444 ORTHO05D007748 1.9e-94 350.1 333 55.9
Lalb_Chr18g0045971 Lupinus albus HOM05D006444 ORTHO05D007748 3.2e-94 349.4 335 54.6
Glyma.03G233000 Glycine max HOM05D006444 ORTHO05D007748 4.2e-94 349.0 337 55.2
Nitab4.5_0002715g0070 Nicotiana tabacum HOM05D006444 ORTHO05D007748 3.5e-93 345.9 338 54.7
Oeu028007.2 Olea europaea HOM05D006444 ORTHO05D007748 4.6e-93 345.5 338 55.9
Atru.chr2.132 Acer truncatum HOM05D006444 ORTHO05D007748 2.3e-92 343.2 333 56.2
Peaxi162Scf00073g00128 Petunia axillaris HOM05D006444 ORTHO05D007748 3.9e-92 342.4 337 55.5
TWI56G1276 Tripterygium wilfordii HOM05D006444 ORTHO05D007748 1.1e-91 340.9 335 55.2
Oeu045894.1 Olea europaea HOM05D006444 ORTHO05D007748 2.5e-91 339.7 318 56.3
Phvul.001G226600 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 3.3e-91 339.3 337 53.1
VMungo1383G3166 Vigna mungo HOM05D006444 ORTHO05D007748 4.3e-91 339.0 337 54.3
Sopen01g043670 Solanum pennellii HOM05D006444 ORTHO05D007748 6.2e-90 335.1 340 54.7
Lj1g0016861 Lotus japonicus HOM05D006444 ORTHO05D007748 1.1e-89 334.3 348 53.2
Hund21734 Selenicereus undatus HOM05D006444 ORTHO05D007748 1.1e-89 334.3 344 52.6
RcHm_v2.0_Chr3g0456691 Rosa chinensis HOM05D006444 ORTHO05D007748 1.8e-89 333.6 336 53.9
Nn3g21596 Nelumbo nucifera HOM05D006444 ORTHO05D007748 5.3e-89 332.0 346 52.3
Lsat_1_v5_gn_7_73840 Lactuca sativa HOM05D006444 ORTHO05D007748 1.2e-88 330.9 336 52.7
Nn4g25689 Nelumbo nucifera HOM05D006444 ORTHO05D007748 3.4e-88 329.3 346 52.9
MSTRG.20391 Avicennia marina HOM05D006444 ORTHO05D007748 1.3e-87 327.4 338 52.7
CsaV3_1G038500 Cucumis sativus L. HOM05D006444 ORTHO05D007748 2.2e-87 326.6 329 53.2
MELO3C015276.2 Cucumis melo HOM05D006444 ORTHO05D007748 2.9e-87 326.2 329 52.9
PGSC0003DMG400024779 Solanum tuberosum HOM05D006444 ORTHO05D007748 2.9e-87 326.2 361 50.7
CAN.G1273.16 Capsicum annuum HOM05D006444 ORTHO05D007748 4.9e-87 325.5 372 51.3
Migut.B00986 Erythranthe guttata HOM05D006444 ORTHO05D007748 8.4e-87 324.7 349 50.4
FvH4_6g07110 Fragaria vesca HOM05D006444 ORTHO05D007748 3.2e-86 322.8 334 52.4
FAN05G1290 Fragaria x ananassa HOM05D006444 ORTHO05D007748 3.2e-86 322.8 334 52.7
FAN14G0724 Fragaria x ananassa HOM05D006444 ORTHO05D007748 3.2e-86 322.8 334 52.4
ECA236G3124 Erigeron canadensis HOM05D006444 ORTHO05D007748 2.1e-85 320.1 331 52.6
FAN02G1429 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.5e-83 313.9 334 52.1
Glyma.10G148900 Glycine max HOM05D006444 ORTHO05D007748 1.5e-83 313.9 339 52.2
THA.LOC104818740 Tarenaya hassleriana HOM05D006444 ORTHO05D007748 9.6e-83 311.2 332 50.6
ATR0706G081 Amborella trichopoda HOM05D006444 ORTHO05D007748 1.3e-82 310.8 303 53.1
VMungo0720G1741 Vigna mungo HOM05D006444 ORTHO05D007748 3.1e-81 306.2 335 49.9
Phvul.007G199800 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 5.3e-81 305.4 334 48.2
SGA_v2.0_scaffold4G01962 Striga asiatica HOM05D006444 ORTHO05D007748 5.3e-81 305.4 344 48.3
HanXRQChr15g0495151 Helianthus annuus HOM05D006444 ORTHO05D007748 6.4e-79 298.5 340 47.6
CANSAT54G2069 Cannabis sativa HOM05D006444 ORTHO05D007748 3.2e-78 296.2 330 50.9
SalBow7G4019 Salvia bowleyana HOM05D006444 ORTHO05D007748 6.7e-76 288.5 323 50.2
CDE09G1197 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 8.7e-76 288.1 205 66.3
AUR62005256 Chenopodium quinoa HOM05D006444 ORTHO05D007748 9.6e-75 284.6 286 53.8
Psat3g013840 Pisum sativum HOM05D006444 ORTHO05D007748 2.1e-74 283.5 266 53.0
PSO357G0038 Papaver somniferum HOM05D006444 ORTHO05D007748 6.2e-74 282.0 354 44.6
PSO170G3086 Papaver somniferum HOM05D006444 ORTHO05D007748 4.0e-73 279.3 354 44.1
Aqoxy2G02847 Aquilegia oxysepala HOM05D006444 ORTHO05D007748 9.0e-73 278.1 357 47.9
AUR62000705 Chenopodium quinoa HOM05D006444 ORTHO05D007748 2.0e-72 276.9 286 53.1
CDE02G1332 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 3.4e-72 276.2 258 54.3
Thecc.04G293900 Theobroma cacao HOM05D006444 ORTHO05D007748 1.3e-71 274.2 337 46.3
unitig_46.g18373 Utricularia gibba HOM05D006444 ORTHO05D007748 3.8e-71 272.7 337 47.2
Sp2g21090 Schrenkiella parvula HOM05D006444 ORTHO05D007748 4.2e-70 269.2 331 45.9
Sc16g0008870 Simmondsia chinensis HOM05D006444 ORTHO05D007748 3.5e-69 266.2 283 52.7
Zm00001eb014130 Zea mays HOM05D006444 ORTHO05D007748 6.7e-68 261.9 310 47.1
CARHR186630 Cardamine hirsuta HOM05D006444 ORTHO05D007748 1.5e-67 260.8 334 42.2
Thhalv10004624m.g Eutrema salsugineum HOM05D006444 ORTHO05D007748 2.5e-67 260.0 325 44.0
A06p37110 Brassica napus HOM05D006444 ORTHO05D007748 5.7e-67 258.8 335 43.3
BraA06t26637Z Brassica rapa HOM05D006444 ORTHO05D007748 5.7e-67 258.8 335 43.3
Carub.0006s2458 Capsella rubella HOM05D006444 ORTHO05D007748 5.7e-67 258.8 331 42.9
Aa31LG11G9750 Aethionema arabicum HOM05D006444 ORTHO05D007748 9.7e-67 258.1 337 45.1
Actinidia35534 Actinidia chinensis HOM05D006444 ORTHO05D007748 2.2e-66 256.9 214 67.3
Duzib151G0636 Durio zibethinus HOM05D006444 ORTHO05D007748 1.4e-65 254.2 346 45.7
Os03g0301400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 2.4e-65 253.4 302 46.4
MBI19_g14287_MAGBIO Magnolia biondii HOM05D006444 ORTHO05D007748 5.3e-65 252.3 234 55.6
AL6G38850 Arabidopsis lyrata HOM05D006444 ORTHO05D007748 2.6e-64 250.0 331 43.2
BolC7t44660H Brassica oleracea HOM05D006444 ORTHO05D007748 3.4e-64 249.6 335 42.4
AT5G26940 Arabidopsis thaliana HOM05D006444 ORTHO05D007748 1.7e-63 247.3 335 42.4
HPP92_011867 Vanilla planifolia HOM05D006444 ORTHO05D007748 2.5e-62 243.4 274 47.1
Prupe.1G126500 Prunus persica HOM05D006444 ORTHO05D007748 9.4e-62 241.5 217 54.4
Ciclev10005435m.g Citrus clementina HOM05D006444 ORTHO05D007748 1.8e-60 237.3 329 44.7
C07p41320 Brassica napus HOM05D006444 ORTHO05D007748 3.9e-60 236.1 360 39.2
RcHm_v2.0_Chr4g0424201 Rosa chinensis HOM05D006444 ORTHO05D007748 2.2e-58 230.3 208 56.2
MD13G1159900 Malus domestica HOM05D006444 ORTHO05D007748 2.8e-58 229.9 233 50.6
Hund21730 Selenicereus undatus HOM05D006444 ORTHO05D007748 1.8e-57 227.3 279 44.8
Os04g0623400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 1.7e-50 204.1 190 52.1
FAN07G1328 Fragaria x ananassa HOM05D006444 ORTHO05D007748 5.9e-48 195.7 204 49.0
TAR362G0047 Trochodendron aralioides HOM05D006444 ORTHO05D007748 1.0e-47 194.9 209 53.6
AagrBONN_evm.TU.Sc2ySwM_344.4230 Anthoceros agrestis HOM05D006444 ORTHO05D007748 1.4e-46 191.0 209 48.8
MD12G1208900 Malus domestica HOM05D006444 ORTHO05D007748 7.2e-46 188.7 200 55.5
Mapoly0162s0013 Marchantia polymorpha HOM05D006444 ORTHO05D007748 3.6e-45 186.4 204 49.0
SMO116G0265 Selaginella moellendorffii HOM05D006444 ORTHO05D007748 1.1e-43 181.4 199 45.7
FvH4_4g19220 Fragaria vesca HOM05D006444 ORTHO05D007748 2.6e-43 180.3 203 46.3
FAN12G0061 Fragaria x ananassa HOM05D006444 ORTHO05D007748 6.3e-42 175.6 203 45.8
SEGI_10576 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 7.0e-41 172.2 150 53.3
FAN12G3514 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.2e-39 167.2 203 44.8
MD12G1209000 Malus domestica HOM05D006444 ORTHO05D007748 8.0e-37 158.7 138 54.3
Pp3c18_14120 Physcomitrium patens HOM05D001061 ORTHO05D007748 4.0e-36 156.4 198 39.9
FAN09G3591 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.2e-34 150.6 143 53.1
Atru.chr4.2940 Acer truncatum HOM05D006444 ORTHO05D007748 5.9e-32 142.5 126 57.9
Actinidia35535 Actinidia chinensis HOM05D006444 ORTHO05D007748 5.0e-23 112.8 86 66.3
MCO01G157 Micromonas commoda HOM05D005236 ORTHO05D006557 6.6e-23 112.5 180 37.2
EL10Ac4g09387 Beta vulgaris HOM05D006444 ORTHO05D007748 1.7e-18 97.8 86 61.6
PRCOL_00002449 Prasinoderma coloniale HOM05D005236 ORTHO05D006557 1.4e-12 78.2 205 30.2
Cre01.g021850 Chlamydomonas reinhardtii HOM05D005236 ORTHO05D006557 1.6e-08 64.7 167 29.9
SEGI_25648 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 7.3e-06 55.8 42 69.0


User provided reference genes

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