Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046575 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.7e-52 206.8 102 100.0
CSS0028214 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.2e-34 148.3 94 77.7
CSS0041994 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 8.0e-33 143.7 102 68.6
CSS0045195 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.4e-31 138.3 92 71.7
CSS0013630 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.7e-30 136.0 84 81.0
CSS0032088 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.1e-29 133.3 92 72.8
CSS0038037 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.4e-29 132.9 102 65.7
CSS0009370 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.8e-29 132.5 102 65.7
CSS0044722 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.2e-28 129.8 102 63.7
CSS0026614 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.6e-28 129.4 102 62.7
CSS0043443 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.6e-28 129.4 102 63.7
CSS0023133 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.0e-28 129.0 102 63.7
CSS0010523 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.7e-28 128.6 102 62.7
CSS0016748 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 5.9e-28 127.5 102 61.8
CSS0027105 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.9e-28 127.5 102 62.7
CSS0007439 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.0e-27 124.4 100 60.0
CSS0036731 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 6.5e-27 124.0 102 60.8
CSS0033039 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 8.6e-27 123.6 100 60.0
CSS0035385 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.5e-26 120.9 99 60.6
CSS0049818 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.2e-26 120.6 102 61.8
CSS0020468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.6e-25 119.4 102 57.8
CSS0032736 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.6e-25 119.4 100 60.0
CSS0041590 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.1e-25 119.0 102 58.8
CSS0032809 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.4e-23 111.7 95 60.0
CSS0048939 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.4e-23 111.3 90 61.1
CSS0004389 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.2e-21 103.6 102 49.0
CSS0006955 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-20 102.8 102 48.0
CSS0001115 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.5e-20 101.3 102 47.1
CSS0045587 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.5e-20 101.3 98 48.0
CSS0002074 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.8e-20 100.5 97 45.4
CSS0032111 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.7e-19 99.4 102 47.1
CSS0045787 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 3.8e-19 98.2 94 47.9
CSS0028114 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.1e-18 96.7 98 55.1
CSS0006381 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.9e-18 95.9 82 56.1
CSS0032702 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.9e-18 95.9 76 63.2
CSS0016336 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.5e-18 95.5 89 53.9
CSS0037140 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.6e-17 91.7 101 42.6
CSS0014386 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.0e-17 90.5 101 39.6
CSS0034075 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.4e-16 89.7 75 61.3
CSS0020179 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.2e-16 87.8 99 41.4
CSS0007605 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 6.8e-16 87.4 97 40.2
CSS0047834 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.8e-16 87.4 99 40.4
CSS0010509 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.5e-15 86.3 100 39.0
CSS0027359 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.4e-15 84.7 97 41.2
CSS0016144 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.3e-14 83.2 106 38.7
CSS0029354 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.4e-14 80.9 96 40.6
Actinidia35690 Actinidia chinensis HOM05D000003 ORTHO05D000022 9.2e-13 77.0 98 41.8
CSS0049418 Camellia sinensis var. sinensis HOM05D001185 ORTHO05D003777 1.6e-12 76.3 88 36.4
CSS0017504 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.8e-12 73.9 72 47.2
vmacro08980 Vaccinium macrocarpon HOM05D000055 ORTHO05D002202 1.7e-11 72.8 102 38.2
CSS0049107 Camellia sinensis var. sinensis HOM05D006120 ORTHO05D007913 5.0e-11 71.2 97 34.0
Atru.chr11.1308 Acer truncatum HOM05D000003 ORTHO05D000022 1.1e-10 70.1 100 37.0
CSS0011514 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.5e-10 69.7 55 61.8
Atru.chr7.668 Acer truncatum HOM05D000003 ORTHO05D000004 2.5e-10 68.9 100 35.0
vmacro08191 Vaccinium macrocarpon HOM05D000548 ORTHO05D000987 2.5e-10 68.9 88 43.2
vmacro14890 Vaccinium macrocarpon HOM05D002989 ORTHO05D003218 4.3e-10 68.2 97 34.0
CSS0038564 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.6e-10 67.8 73 42.5
Atru.chr10.857 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-09 66.6 97 34.0
Atru.chr1.1905 Acer truncatum HOM05D000003 ORTHO05D000022 2.8e-09 65.5 100 35.0
Atru.chr4.29 Acer truncatum HOM05D000003 ORTHO05D000022 2.8e-09 65.5 101 32.7
Atru.chr5.2141 Acer truncatum HOM05D000003 ORTHO05D000022 3.6e-09 65.1 101 33.7
CSS0039165 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.6e-09 65.1 68 42.6
vmacro01816 Vaccinium macrocarpon HOM05D000489 ORTHO05D000372 4.7e-09 64.7 102 30.4
Atru.chr3.867 Acer truncatum HOM05D000003 ORTHO05D000022 8.0e-09 63.9 101 37.6
Atru.chr1.2620 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-08 63.5 101 33.7
CSS0015976 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 1.4e-08 63.2 93 30.1
Lj9P217T13 Lonicera japonica HOM05D000003 ORTHO05D000022 1.4e-08 63.2 90 38.9
Nitab4.5_0007519g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000022 1.4e-08 63.2 97 35.1
Atru.chr6.2848 Acer truncatum HOM05D000003 ORTHO05D000022 1.8e-08 62.8 97 37.1
CSS0036470 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 2.3e-08 62.4 77 37.7
Hma1.2p1_0333F.1_g128210 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 2.3e-08 62.4 100 39.0
Hma1.2p1_3263F.1_g334663 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 2.3e-08 62.4 100 39.0
Hma1.2p1_3263F.1_g334666 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 2.3e-08 62.4 100 39.0
Atru.chr1.3262 Acer truncatum HOM05D000003 ORTHO05D000022 3.1e-08 62.0 101 33.7
Nitab4.5_0007388g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000022 3.1e-08 62.0 97 34.0
Atru.chr1.1302 Acer truncatum HOM05D000003 ORTHO05D000004 4.0e-08 61.6 93 37.6
Atru.chr4.172 Acer truncatum HOM05D000003 ORTHO05D000004 4.0e-08 61.6 97 38.1
vmacro04538 Vaccinium macrocarpon HOM05D006275 ORTHO05D007839 4.0e-08 61.6 71 45.1
Atru.chr10.629 Acer truncatum HOM05D000003 ORTHO05D000004 5.2e-08 61.2 101 31.7
vmacro19136 Vaccinium macrocarpon HOM05D001065 ORTHO05D003103 5.2e-08 61.2 92 37.0
Atru.chr12.2484 Acer truncatum HOM05D000003 ORTHO05D000022 6.8e-08 60.8 97 35.1
Lj1P685T53 Lonicera japonica HOM05D000155 ORTHO05D000022 6.8e-08 60.8 97 35.1
Lj1P687T17 Lonicera japonica HOM05D000155 ORTHO05D000022 6.8e-08 60.8 97 35.1
Lj1P688T36 Lonicera japonica HOM05D000155 ORTHO05D000022 6.8e-08 60.8 97 35.1
TWI81G0242 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 6.8e-08 60.8 97 34.0
vmacro09610 Vaccinium macrocarpon HOM05D000003 ORTHO05D000007 6.8e-08 60.8 102 31.4
Atru.chr2.2394 Acer truncatum HOM05D000003 ORTHO05D000022 8.9e-08 60.5 97 32.0
Atru.chr3.1879 Acer truncatum HOM05D000003 ORTHO05D000022 8.9e-08 60.5 93 37.6
Sopen10g008360 Solanum pennellii HOM05D000003 ORTHO05D000022 8.9e-08 60.5 97 37.1
Atru.chr2.2857 Acer truncatum HOM05D000003 ORTHO05D000022 1.2e-07 60.1 100 32.0
Atru.chr3.2200 Acer truncatum HOM05D000003 ORTHO05D000022 1.2e-07 60.1 101 31.7
Atru.chr8.829 Acer truncatum HOM05D000003 ORTHO05D000022 1.2e-07 60.1 101 31.7
Atru.chr10.81 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-07 59.7 100 35.0
Nitab4.5_0012197g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000022 1.5e-07 59.7 97 33.0
vmacro18663 Vaccinium macrocarpon HOM05D000010 ORTHO05D000022 1.5e-07 59.7 79 38.0
Atru.chr3.2393 Acer truncatum HOM05D000003 ORTHO05D000022 2.0e-07 59.3 97 35.1
Atru.chr7.120 Acer truncatum HOM05D000003 ORTHO05D000004 2.0e-07 59.3 96 38.5
Hma1.2p1_0931F.1_g238170 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 2.0e-07 59.3 99 34.3
Atru.chr2.971 Acer truncatum HOM05D000003 ORTHO05D000022 2.6e-07 58.9 97 35.1
Atru.chr3.1552 Acer truncatum HOM05D000003 ORTHO05D000022 2.6e-07 58.9 88 34.1
Atru.chr1.1701 Acer truncatum HOM05D000003 ORTHO05D000022 3.4e-07 58.5 100 35.0
Atru.chr11.82 Acer truncatum HOM05D000003 ORTHO05D000022 3.4e-07 58.5 100 32.0
Atru.chr2.1762 Acer truncatum HOM05D000003 ORTHO05D000022 3.4e-07 58.5 100 35.0
Atru.chr3.2099 Acer truncatum HOM05D000003 ORTHO05D000022 3.4e-07 58.5 97 34.0
Atru.chr12.663 Acer truncatum HOM05D000003 ORTHO05D000022 4.4e-07 58.2 97 30.9
Solyc07g056380.1 Solanum lycopersicum HOM05D000003 ORTHO05D000022 4.4e-07 58.2 97 33.0
vmacro16872 Vaccinium macrocarpon HOM05D000003 ORTHO05D000022 5.8e-07 57.8 90 30.0
Atru.chr2.3435 Acer truncatum HOM05D000003 ORTHO05D000022 7.5e-07 57.4 100 34.0
Atru.chr3.1505 Acer truncatum HOM05D000003 ORTHO05D000022 7.5e-07 57.4 100 32.0
Atru.chr5.2238 Acer truncatum HOM05D000003 ORTHO05D000004 7.5e-07 57.4 97 34.0
Nitab4.5_0000593g0300 Nicotiana tabacum HOM05D000003 ORTHO05D000022 7.5e-07 57.4 79 35.4
Solyc10g018550.1 Solanum lycopersicum HOM05D000003 ORTHO05D000022 7.5e-07 57.4 94 36.2
vmacro00861 Vaccinium macrocarpon HOM05D000042 ORTHO05D000980 7.5e-07 57.4 92 37.0
Atru.chr2.1419 Acer truncatum HOM05D000003 ORTHO05D000022 9.8e-07 57.0 97 33.0
Atru.chr3.2067 Acer truncatum HOM05D000003 ORTHO05D000022 9.8e-07 57.0 101 29.7
Atru.chr5.1996 Acer truncatum HOM05D000003 ORTHO05D000022 1.3e-06 56.6 101 30.7
CSS0031822 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.3e-06 56.6 59 37.3
Sopen10g006600 Solanum pennellii HOM05D000003 ORTHO05D001349 1.3e-06 56.6 91 37.4
Atru.chr10.890 Acer truncatum HOM05D000003 ORTHO05D000022 1.7e-06 56.2 97 32.0
Atru.chr2.2708 Acer truncatum HOM05D000003 ORTHO05D000022 1.7e-06 56.2 97 33.0
Atru.chr4.458 Acer truncatum HOM05D000003 ORTHO05D000022 1.7e-06 56.2 93 36.6
MBI17_g21963_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.7e-06 56.2 99 33.3
Atru.chr1.776 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-06 55.8 100 35.0
Atru.chr10.427 Acer truncatum HOM05D000003 ORTHO05D000022 2.2e-06 55.8 79 40.5
Lj2C976T3 Lonicera japonica HOM05D000003 ORTHO05D000022 2.2e-06 55.8 90 34.4
RcHm_v2.0_Chr2g0146161 Rosa chinensis HOM05D000003 ORTHO05D000022 2.2e-06 55.8 91 34.1
vmacro11435 Vaccinium macrocarpon HOM05D000455 ORTHO05D426981 2.2e-06 55.8 76 42.1
Atru.chr1.276 Acer truncatum HOM05D000003 ORTHO05D000022 2.9e-06 55.5 97 33.0
Atru.chr4.827 Acer truncatum HOM05D000003 ORTHO05D000022 2.9e-06 55.5 98 31.6
Lj4P794T17 Lonicera japonica HOM05D016027 ORTHO05D000022 2.9e-06 55.5 97 34.0
vmacro20205 Vaccinium macrocarpon HOM05D002235 ORTHO05D006252 2.9e-06 55.5 75 36.0
Atru.chr7.713 Acer truncatum HOM05D000003 ORTHO05D000004 3.7e-06 55.1 100 32.0
Atru.chr8.30 Acer truncatum HOM05D000003 ORTHO05D000022 3.7e-06 55.1 97 33.0
Atru.chr9.658 Acer truncatum HOM05D000003 ORTHO05D000022 3.7e-06 55.1 93 35.5
RcHm_v2.0_Chr2g0152401 Rosa chinensis HOM05D000003 ORTHO05D000022 3.7e-06 55.1 91 34.1
Atru.chr13.1101 Acer truncatum HOM05D000003 ORTHO05D000022 6.4e-06 54.3 101 35.6
Atru.chr4.136 Acer truncatum HOM05D000003 ORTHO05D000022 6.4e-06 54.3 101 31.7
Atru.chr4.1844 Acer truncatum HOM05D000003 ORTHO05D000022 6.4e-06 54.3 79 38.0
Atru.chr8.1133 Acer truncatum HOM05D000003 ORTHO05D000022 6.4e-06 54.3 100 32.0
vmacro06797 Vaccinium macrocarpon HOM05D000003 ORTHO05D000022 6.4e-06 54.3 88 34.1


User provided reference genes

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