Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046339 Camellia sinensis var. sinensis HOM05D005254 ORTHO05D007557 0.0e+00 1109.0 550 100.0
CSS0038291 Camellia sinensis var. sinensis HOM05D005254 ORTHO05D007557 5.2e-288 993.8 567 90.1
CSS0023845 Camellia sinensis var. sinensis HOM05D005254 ORTHO05D007557 5.8e-271 937.2 567 86.4
Actinidia25861 Actinidia chinensis HOM05D005254 ORTHO05D007557 2.4e-248 862.1 567 77.4
Rhsim01G0292000 Rhododendron simsii HOM05D005254 ORTHO05D007557 2.7e-244 848.6 569 76.1
Dinv10118 Davidia involucrata HOM05D005254 ORTHO05D007557 8.5e-238 827.0 567 73.9
Hma1.2p1_0486F.1_g163430 Hydrangea macrophylla HOM05D005254 ORTHO05D007557 1.2e-231 806.6 568 71.8
GSVIVG01028140001 Vitis vinifera HOM05D005254 ORTHO05D007557 2.1e-228 795.8 567 72.0
TAR633G1480 Trochodendron aralioides HOM05D005254 ORTHO05D007557 2.7e-220 768.8 567 69.3
Manes.05G014200 Manihot esculenta HOM05D005254 ORTHO05D007557 2.0e-218 762.7 556 68.5
QL12p019422 Quercus lobata HOM05D005254 ORTHO05D007557 1.8e-216 756.1 562 67.8
Thecc.01G315800 Theobroma cacao HOM05D005254 ORTHO05D007557 1.2e-215 753.4 567 67.4
Duzib133G0392 Durio zibethinus HOM05D005254 ORTHO05D007557 5.9e-215 751.1 567 67.4
Gorai.004G144800 Gossypium raimondii HOM05D005254 ORTHO05D007557 6.5e-214 747.7 562 67.4
Cc01_g21580 Coffea canephora HOM05D005254 ORTHO05D007557 1.9e-213 746.1 567 66.1
Gohir.D08G140700 Gossypium hirsutum HOM05D005254 ORTHO05D007557 1.9e-213 746.1 562 67.4
Potri.002G194000 Populus trichocarpa HOM05D005254 ORTHO05D007557 1.9e-213 746.1 561 66.3
Migut.N00932 Erythranthe guttata HOM05D005254 ORTHO05D007557 3.2e-213 745.3 560 67.5
Prupe.3G010500 Prunus persica HOM05D005254 ORTHO05D007557 4.2e-213 745.0 567 67.7
Atru.chr5.974 Acer truncatum HOM05D005254 ORTHO05D007557 1.2e-212 743.4 569 66.6
COL.COLO4_23211 Corchorus olitorius HOM05D005254 ORTHO05D007557 1.6e-212 743.0 568 66.9
CiPaw.07G119100 Carya illinoinensis HOM05D005254 ORTHO05D007557 1.8e-211 739.6 560 67.1
Nn3g21729 Nelumbo nucifera HOM05D005254 ORTHO05D007557 1.8e-211 739.6 559 65.7
HanXRQChr01g0000761 Helianthus annuus HOM05D005254 ORTHO05D007557 1.2e-210 736.9 564 67.0
Peaxi162Scf00058g02631 Petunia axillaris HOM05D005254 ORTHO05D007557 1.5e-210 736.5 563 65.0
DCAR_018280 Daucus carota HOM05D005254 ORTHO05D007557 9.7e-210 733.8 562 66.5
Gohir.A08G119800 Gossypium hirsutum HOM05D005254 ORTHO05D007557 3.7e-209 731.9 562 66.2
CAN.G1280.35 Capsicum annuum HOM05D005254 ORTHO05D007557 1.1e-208 730.3 563 64.3
Hund09648 Selenicereus undatus HOM05D005254 ORTHO05D007557 4.1e-208 728.4 567 64.2
MBI18_g03638_MAGBIO Magnolia biondii HOM05D005254 ORTHO05D007557 5.3e-208 728.0 574 64.8
Cfa005773 Carpinus fangiana HOM05D005254 ORTHO05D007557 9.1e-208 727.2 535 69.2
RcHm_v2.0_Chr3g0487381 Rosa chinensis HOM05D005254 ORTHO05D007557 1.6e-207 726.5 561 65.4
TWI36G0433 Tripterygium wilfordii HOM05D005254 ORTHO05D007557 2.7e-207 725.7 561 65.2
MD17G1277500 Malus domestica HOM05D005254 ORTHO05D007557 5.9e-207 724.5 567 64.9
MSTRG.17387 Avicennia marina HOM05D005254 ORTHO05D007557 2.2e-206 722.6 557 65.2
Sopen06g004190 Solanum pennellii HOM05D005254 ORTHO05D007557 2.9e-206 722.2 570 63.2
Sabra02G0162400 Salix brachista HOM05D005254 ORTHO05D007557 8.5e-206 720.7 615 60.8
Eucgr.H00999 Eucalyptus grandis HOM05D005254 ORTHO05D007557 1.1e-205 720.3 564 65.2
Glyma.03G220700 Glycine max HOM05D005254 ORTHO05D007557 1.1e-205 720.3 561 65.2
TPR.G4086 Trifolium pratense HOM05D005254 ORTHO05D007557 1.5e-205 719.9 562 64.4
SalBow2G1139 Salvia bowleyana HOM05D005254 ORTHO05D007557 1.9e-205 719.5 567 64.4
Solyc06g009530.3 Solanum lycopersicum HOM05D005254 ORTHO05D007557 1.9e-205 719.5 570 63.2
Ciclev10018561m.g Citrus clementina HOM05D005254 ORTHO05D007557 2.5e-205 719.2 561 64.9
Psat0s425g0240 Pisum sativum HOM05D005254 ORTHO05D007557 1.6e-204 716.5 567 63.7
CsaV3_7G030070 Cucumis sativus L. HOM05D005254 ORTHO05D007557 2.1e-204 716.1 556 63.8
Lsat_1_v5_gn_5_191360 Lactuca sativa HOM05D005254 ORTHO05D007557 2.7e-204 715.7 571 64.8
Lj1g0000440 Lotus japonicus HOM05D005254 ORTHO05D007557 2.7e-204 715.7 567 63.7
Sc17g0000380 Simmondsia chinensis HOM05D005254 ORTHO05D007557 3.6e-204 715.3 561 64.0
Glyma.19G217500 Glycine max HOM05D005254 ORTHO05D007557 6.1e-204 714.5 567 64.7
MELO3C015914.2 Cucumis melo HOM05D005254 ORTHO05D007557 8.0e-204 714.1 556 63.5
Medtr7g109730 Medicago truncatula HOM05D005254 ORTHO05D007557 8.0e-204 714.1 560 64.6
Ca_09219_v3 Cicer arietinum L. HOM05D005254 ORTHO05D007557 1.4e-203 713.4 577 63.3
Sed0015859 Sechium edule HOM05D005254 ORTHO05D007557 4.0e-203 711.8 557 63.2
PGR083G2196 Punica granatum HOM05D005254 ORTHO05D007557 5.2e-203 711.4 568 64.6
CANSAT25G1517 Cannabis sativa HOM05D005254 ORTHO05D007557 8.8e-203 710.7 545 66.1
Lalb_Chr04g0260001 Lupinus albus HOM05D005254 ORTHO05D007557 8.8e-203 710.7 565 64.1
Aqoxy5G02683 Aquilegia oxysepala HOM05D005254 ORTHO05D007557 1.5e-202 709.9 561 63.6
EL10As5g23556 Beta vulgaris HOM05D005254 ORTHO05D007557 4.4e-202 708.4 574 62.5
Ah.02g112410 Amaranthus hybridus HOM05D005254 ORTHO05D007557 1.3e-201 706.8 560 62.3
Sed0001136 Sechium edule HOM05D005254 ORTHO05D007557 1.3e-201 706.8 567 62.8
arahy.Tifrunner.gnm1.ann1.AYF5PU Arachis hypogaea HOM05D005254 ORTHO05D007557 2.2e-201 706.1 591 61.3
ECA248G2092 Erigeron canadensis HOM05D005254 ORTHO05D007557 2.2e-201 706.1 551 65.3
VMungo1383G0540 Vigna mungo HOM05D005254 ORTHO05D007557 2.2e-201 706.1 561 63.5
Phvul.001G214200 Phaseolus vulgaris HOM05D005254 ORTHO05D007557 3.7e-201 705.3 561 63.1
MD09G1284300 Malus domestica HOM05D005254 ORTHO05D007557 4.8e-201 704.9 572 63.3
FvH4_1g27060 Fragaria vesca HOM05D005254 ORTHO05D007557 1.1e-200 703.7 559 63.3
FAN19G0333 Fragaria x ananassa HOM05D005254 ORTHO05D007557 1.8e-200 703.0 559 63.3
Sp5g01040 Schrenkiella parvula HOM05D005254 ORTHO05D007557 4.1e-200 701.8 559 63.3
Lalb_Chr15g0078051 Lupinus albus HOM05D005254 ORTHO05D007557 5.4e-200 701.4 559 63.5
AL5G45120 Arabidopsis lyrata HOM05D005254 ORTHO05D007557 1.2e-199 700.3 564 63.3
FAN26G2945 Fragaria x ananassa HOM05D005254 ORTHO05D007557 3.5e-199 698.7 559 63.3
PSO170G0810 Papaver somniferum HOM05D005254 ORTHO05D007557 5.9e-199 698.0 565 63.5
AUR62043231 Chenopodium quinoa HOM05D005254 ORTHO05D007557 1.3e-198 696.8 558 61.8
vmacro15105 Vaccinium macrocarpon HOM05D005254 ORTHO05D007557 1.7e-198 696.4 500 72.4
FAN23G1174 Fragaria x ananassa HOM05D005254 ORTHO05D007557 3.8e-198 695.3 559 62.4
Thhalv10005752m.g Eutrema salsugineum HOM05D005254 ORTHO05D007557 8.6e-198 694.1 555 63.1
AT3G62360 Arabidopsis thaliana HOM05D005254 ORTHO05D007557 1.1e-197 693.7 566 62.7
Aa31LG10G16290 Aethionema arabicum HOM05D005254 ORTHO05D007557 7.2e-197 691.0 559 62.4
CARHR172690 Cardamine hirsuta HOM05D005254 ORTHO05D007557 1.2e-196 690.3 559 63.0
THA.LOC104802150 Tarenaya hassleriana HOM05D005254 ORTHO05D007557 3.6e-196 688.7 573 61.8
BcaC07g40720 Brassica carinata HOM05D005254 ORTHO05D007557 6.1e-196 688.0 555 63.6
Carub.0005s2908 Capsella rubella HOM05D005254 ORTHO05D007557 6.1e-196 688.0 566 61.8
ClCG09G004990 Citrullus lanatus HOM05D005254 ORTHO05D007557 1.0e-195 687.2 559 62.1
PSO357G0205 Papaver somniferum HOM05D005254 ORTHO05D007557 1.4e-195 686.8 565 62.8
C08p37230 Brassica napus HOM05D005254 ORTHO05D007557 1.8e-195 686.4 569 62.9
A09p54350 Brassica napus HOM05D005254 ORTHO05D007557 3.4e-194 682.2 569 62.6
BolC8t51301H Brassica oleracea HOM05D005254 ORTHO05D007557 3.4e-194 682.2 575 61.9
BraA09t40847Z Brassica rapa HOM05D005254 ORTHO05D007557 3.4e-194 682.2 569 62.7
BcaC07g42749 Brassica carinata HOM05D005254 ORTHO05D007557 1.7e-193 679.9 572 61.4
arahy.Tifrunner.gnm1.ann1.72UXVZ Arachis hypogaea HOM05D005254 ORTHO05D007557 1.4e-192 676.8 554 62.5
Lj1C15G16 Lonicera japonica HOM05D005254 ORTHO05D007557 5.4e-192 674.9 516 67.6
Migut.O00532 Erythranthe guttata HOM05D005254 ORTHO05D007557 1.7e-190 669.8 501 67.9
Nitab4.5_0000363g0240 Nicotiana tabacum HOM05D005254 ORTHO05D007557 6.6e-190 667.9 626 56.4
Nitab4.5_0007407g0050 Nicotiana tabacum HOM05D005254 ORTHO05D007557 1.2e-188 663.7 519 64.2
ATR0693G194 Amborella trichopoda HOM05D005254 ORTHO05D007557 1.3e-185 653.7 541 61.0
CDE01G0437 Ceratophyllum demersum HOM05D005254 ORTHO05D007557 1.7e-182 643.3 567 57.3
BcaC08g45197 Brassica carinata HOM05D005254 ORTHO05D007557 6.6e-182 641.3 559 59.6
C06p28230 Brassica napus HOM05D005254 ORTHO05D007557 2.5e-181 639.4 560 59.1
AUR62032507 Chenopodium quinoa HOM05D005254 ORTHO05D007557 1.4e-176 623.6 501 60.7
SGA_v2.0_scaffold6G03340 Striga asiatica HOM05D005254 ORTHO05D007557 4.1e-176 622.1 630 55.4
SEGI_30263 Sequoiadendron giganteum HOM05D005254 ORTHO05D007557 1.5e-173 613.6 563 56.7
HPP92_011729 Vanilla planifolia HOM05D005254 ORTHO05D007557 1.9e-173 613.2 553 56.1
Zm00001eb340350 Zea mays HOM05D005254 ORTHO05D007557 3.3e-173 612.5 561 54.2
Oeu049924.2 Olea europaea HOM05D005254 ORTHO05D007557 1.4e-168 597.0 545 58.9
BcaC07g40722 Brassica carinata HOM05D005254 ORTHO05D007557 2.0e-162 576.6 543 57.1
Pp3c14_26400 Physcomitrium patens HOM05D005254 ORTHO05D007557 1.6e-148 530.4 550 50.0
Mapoly0002s0320 Marchantia polymorpha HOM05D005254 ORTHO05D007557 2.4e-147 526.6 564 49.6
SMO145G0116 Selaginella moellendorffii HOM05D005254 ORTHO05D007557 2.3e-142 510.0 548 47.8
unitig_22.g6696 Utricularia gibba HOM05D005254 ORTHO05D007557 3.3e-133 479.6 577 47.1
Actinidia20982 Actinidia chinensis HOM05D005254 ORTHO05D007557 1.3e-132 477.6 567 51.0
Hma1.2p1_0486F.1_g163440 Hydrangea macrophylla HOM05D005254 ORTHO05D007557 5.7e-117 425.6 335 66.9
Cpa.g.sc18.72 Carica papaya HOM05D005254 ORTHO05D007557 2.2e-97 360.5 275 63.6
Haze_05067 Corylus avellana HOM05D005254 ORTHO05D007557 1.6e-87 327.8 567 39.2
CBR_g12556 Chara braunii HOM05D005254 ORTHO05D007557 2.4e-83 313.9 481 39.1
AagrBONN_evm.TU.Sc2ySwM_344.3074 Anthoceros agrestis HOM05D005254 ORTHO05D007557 1.3e-81 308.1 446 41.5
FAN28G1559 Fragaria x ananassa HOM05D005254 ORTHO05D007557 1.1e-54 218.8 182 61.0
Cpa.g.sc18.74 Carica papaya HOM05D005254 ORTHO05D031611 2.2e-52 211.1 157 66.9
Psat0s2295g0200 Pisum sativum HOM05D005254 ORTHO05D031611 6.0e-42 176.4 215 46.5
Oeu031896.1 Olea europaea HOM05D005254 ORTHO05D007557 1.2e-21 109.0 82 67.1
arahy.Tifrunner.gnm1.ann1.4QV716 Arachis hypogaea HOM05D005254 ORTHO05D031611 3.4e-21 107.5 134 45.5
CAN.G277.2 Capsicum annuum HOM05D005254 ORTHO05D115212 4.2e-19 100.5 202 36.6
vmacro15104 Vaccinium macrocarpon HOM05D005254 ORTHO05D007557 3.5e-18 97.4 60 78.3
BolC6t37993H Brassica oleracea HOM05D005254 ORTHO05D012489 7.9e-18 96.3 82 57.3
Psat4g159280 Pisum sativum HOM05D000515 ORTHO05D020117 1.1e-16 92.4 64 62.5
Cpa.g.sc18.77 Carica papaya HOM05D005254 ORTHO05D007557 9.6e-16 89.4 60 73.3
CAN.G317.3 Capsicum annuum HOM05D005254 ORTHO05D115878 1.1e-14 85.9 94 52.1
Actinidia23681 Actinidia chinensis HOM05D005254 ORTHO05D055336 3.4e-13 80.9 63 69.8
SMO145G0128 Selaginella moellendorffii HOM05D005254 ORTHO05D374975 7.6e-13 79.7 128 34.4
CBR_g12551 Chara braunii HOM05D005254 ORTHO05D131495 3.2e-11 74.3 97 44.3
Actinidia04350 Actinidia chinensis HOM05D002713 ORTHO05D007644 3.5e-10 70.9 58 65.5


User provided reference genes

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