Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046107 Camellia sinensis var. sinensis HOM05D000293 ORTHO05D000180 2.6e-90 335.5 186 100.0
Rhsim01G0224600 Rhododendron simsii HOM05D000293 ORTHO05D000180 5.7e-29 131.7 187 44.9
vmacro14504 Vaccinium macrocarpon HOM05D000293 ORTHO05D000180 5.7e-29 131.7 194 42.8
Actinidia07068 Actinidia chinensis HOM05D000293 ORTHO05D000180 7.5e-29 131.3 180 55.0
CSS0029851 Camellia sinensis var. sinensis HOM05D000293 ORTHO05D000180 1.3e-28 130.6 190 45.3
Dinv06136 Davidia involucrata HOM05D000293 ORTHO05D000180 1.7e-28 130.2 177 46.9
Dinv30677 Davidia involucrata HOM05D000293 ORTHO05D000180 6.3e-28 128.3 181 46.4
Dinv34337 Davidia involucrata HOM05D000293 ORTHO05D000180 6.3e-28 128.3 181 46.4
CSS0006439 Camellia sinensis var. sinensis HOM05D000293 ORTHO05D000180 8.3e-28 127.9 190 44.7
Rhsim13G0087000 Rhododendron simsii HOM05D000293 ORTHO05D000180 2.4e-27 126.3 193 46.6
vmacro03114 Vaccinium macrocarpon HOM05D000293 ORTHO05D000180 4.1e-27 125.6 193 45.1
Actinidia20458 Actinidia chinensis HOM05D000293 ORTHO05D000180 1.6e-26 123.6 192 51.6
PGR119G1994 Punica granatum HOM05D000293 ORTHO05D000180 4.5e-26 122.1 189 41.3
Actinidia03781 Actinidia chinensis HOM05D000293 ORTHO05D000180 1.7e-25 120.2 192 50.5
Actinidia37243 Actinidia chinensis HOM05D000293 ORTHO05D023349 1.2e-23 114.0 157 45.9
GSVIVG01025034001 Vitis vinifera HOM05D000293 ORTHO05D000180 1.0e-22 110.9 194 38.7
PGR102G0406 Punica granatum HOM05D000293 ORTHO05D000180 5.2e-22 108.6 181 38.7
TWI79G0056 Tripterygium wilfordii HOM05D000293 ORTHO05D000180 9.8e-21 104.4 187 38.5
Lj1A159T38 Lonicera japonica HOM05D000293 ORTHO05D000180 2.8e-20 102.8 173 38.7
CiPaw.13G099500 Carya illinoinensis HOM05D000293 ORTHO05D000180 6.3e-20 101.7 216 34.7
Lj2A1055T48 Lonicera japonica HOM05D000293 ORTHO05D000180 8.3e-20 101.3 173 37.6
Manes.11G134300 Manihot esculenta HOM05D000293 ORTHO05D000180 1.6e-18 97.1 165 41.2
Duzib170G1070 Durio zibethinus HOM05D000293 ORTHO05D000180 2.0e-18 96.7 187 38.5
Potri.001G235500 Populus trichocarpa HOM05D000293 ORTHO05D000180 2.0e-18 96.7 170 37.6
Sabra09G0018500 Salix brachista HOM05D000293 ORTHO05D000180 5.9e-18 95.1 170 40.0
Potri.009G027300 Populus trichocarpa HOM05D000293 ORTHO05D000180 8.6e-17 91.3 169 39.1
Dinv32848 Davidia involucrata HOM05D000293 ORTHO05D000180 1.1e-16 90.9 199 37.7
Hma1.2p1_0624F.1_g191200 Hydrangea macrophylla HOM05D000293 ORTHO05D000180 1.5e-16 90.5 202 37.6
Hma1.2p1_0846F.1_g227605 Hydrangea macrophylla HOM05D000293 ORTHO05D000180 1.5e-16 90.5 202 37.6
Duzib150G0205 Durio zibethinus HOM05D000293 ORTHO05D000180 1.9e-16 90.1 165 42.4
QL01p033399 Quercus lobata HOM05D000293 ORTHO05D000180 2.5e-16 89.7 187 36.9
DCAR_005305 Daucus carota HOM05D000293 ORTHO05D000180 7.3e-16 88.2 191 31.4
Lsat_1_v5_gn_5_167580 Lactuca sativa HOM05D000293 ORTHO05D000180 7.3e-16 88.2 183 36.1
TWI31G0727 Tripterygium wilfordii HOM05D000293 ORTHO05D000180 9.5e-16 87.8 187 35.8
Prupe.6G085000 Prunus persica HOM05D000293 ORTHO05D000180 1.2e-15 87.4 89 48.3
Duzib168G1819 Durio zibethinus HOM05D000293 ORTHO05D000180 1.6e-15 87.0 186 36.6
Glyma.11G142900 Glycine max HOM05D000293 ORTHO05D000180 3.1e-14 82.8 202 36.1
Lj3g0005418 Lotus japonicus HOM05D000293 ORTHO05D000180 5.2e-14 82.0 90 51.1
CAN.G241.41 Capsicum annuum HOM05D000293 ORTHO05D000180 1.2e-13 80.9 183 35.0
Lalb_Chr03g0026861 Lupinus albus HOM05D000293 ORTHO05D000180 1.2e-13 80.9 191 36.6
Gohir.D07G100001 Gossypium hirsutum HOM05D000293 ORTHO05D000180 1.5e-13 80.5 192 37.5
Gorai.001G107900 Gossypium raimondii HOM05D000293 ORTHO05D000180 1.5e-13 80.5 192 37.5
Oeu041022.2 Olea europaea HOM05D000293 ORTHO05D000180 2.0e-13 80.1 175 36.6
Sc12g0001690 Simmondsia chinensis HOM05D000293 ORTHO05D000180 2.0e-13 80.1 173 35.3
TPR.G1036 Trifolium pratense HOM05D000293 ORTHO05D000180 2.6e-13 79.7 89 52.8
Haze_24030 Corylus avellana HOM05D000293 ORTHO05D000180 4.4e-13 79.0 162 34.0
Gohir.A07G095700 Gossypium hirsutum HOM05D000293 ORTHO05D000180 4.4e-13 79.0 192 37.5
Eucgr.B02401 Eucalyptus grandis HOM05D000293 ORTHO05D000180 9.8e-13 77.8 187 32.6
AUR62009626 Chenopodium quinoa HOM05D000293 ORTHO05D000180 1.3e-12 77.4 101 45.5
Thecc.09G327800 Theobroma cacao HOM05D000293 ORTHO05D000180 1.7e-12 77.0 162 35.2
Glyma.12G066000 Glycine max HOM05D000293 ORTHO05D000180 2.9e-12 76.3 207 34.8
Gohir.A03G038700 Gossypium hirsutum HOM05D000293 ORTHO05D000180 2.9e-12 76.3 194 33.5
Phvul.011G067000 Phaseolus vulgaris HOM05D000293 ORTHO05D000180 2.9e-12 76.3 94 41.5
Psat7g219640 Pisum sativum HOM05D000293 ORTHO05D000180 2.9e-12 76.3 96 46.9
Gohir.D03G129700 Gossypium hirsutum HOM05D000293 ORTHO05D000180 3.7e-12 75.9 194 33.0
DCAR_006004 Daucus carota HOM05D000293 ORTHO05D000180 4.9e-12 75.5 188 28.2
Solyc06g005330.3 Solanum lycopersicum HOM05D000293 ORTHO05D000180 4.9e-12 75.5 174 33.9
Gorai.003G136400 Gossypium raimondii HOM05D000293 ORTHO05D000180 1.1e-11 74.3 198 32.3
Lsat_1_v5_gn_9_22041 Lactuca sativa HOM05D000293 ORTHO05D000180 1.1e-11 74.3 166 34.3
Manes.04G030450 Manihot esculenta HOM05D000293 ORTHO05D000180 1.1e-11 74.3 166 36.1
Peaxi162Scf00411g00008 Petunia axillaris HOM05D000293 ORTHO05D000180 1.1e-11 74.3 175 35.4
EL10Ac7g15962 Beta vulgaris HOM05D000293 ORTHO05D000180 1.9e-11 73.6 101 41.6
Ah.15g097040 Amaranthus hybridus HOM05D000293 ORTHO05D000180 2.4e-11 73.2 101 42.6
Glyma.13G333200 Glycine max HOM05D000293 ORTHO05D000180 3.2e-11 72.8 200 35.0
AUR62001838 Chenopodium quinoa HOM05D000293 ORTHO05D000180 4.1e-11 72.4 101 43.6
TAR636G2608 Trochodendron aralioides HOM05D000293 ORTHO05D000180 4.1e-11 72.4 178 33.1
Nitab4.5_0000070g0110 Nicotiana tabacum HOM05D000293 ORTHO05D000180 5.4e-11 72.0 192 33.9
Nitab4.5_0008488g0010 Nicotiana tabacum HOM05D000293 ORTHO05D000180 5.4e-11 72.0 174 35.1
Oeu051444.1 Olea europaea HOM05D000293 ORTHO05D000180 5.4e-11 72.0 187 30.5
Lalb_Chr24g0394251 Lupinus albus HOM05D000293 ORTHO05D000180 7.0e-11 71.6 189 32.8
Glyma.15G041100 Glycine max HOM05D000293 ORTHO05D000180 1.6e-10 70.5 192 32.3
HanXRQChr04g0106881 Helianthus annuus HOM05D000293 ORTHO05D000180 1.6e-10 70.5 166 36.7
Sopen06g001300 Solanum pennellii HOM05D000293 ORTHO05D000180 4.6e-10 68.9 175 32.6
ECA236G1878 Erigeron canadensis HOM05D007195 ORTHO05D000180 6.0e-10 68.6 171 36.3
HanXRQChr16g0520721 Helianthus annuus HOM05D000293 ORTHO05D000180 7.8e-10 68.2 183 31.1
Thhalv10002648m.g Eutrema salsugineum HOM05D000293 ORTHO05D000180 1.0e-09 67.8 185 29.2
Cpa.g.sc190.35 Carica papaya HOM05D000293 ORTHO05D000180 1.3e-09 67.4 98 39.8
Medtr4g063100 Medicago truncatula HOM05D000293 ORTHO05D000180 1.7e-09 67.0 91 46.2
arahy.Tifrunner.gnm1.ann1.96C52J Arachis hypogaea HOM05D000293 ORTHO05D000180 3.0e-09 66.2 86 46.5
arahy.Tifrunner.gnm1.ann1.EJIH9F Arachis hypogaea HOM05D000293 ORTHO05D000180 3.0e-09 66.2 86 46.5
HanXRQChr08g0228271 Helianthus annuus HOM05D000293 ORTHO05D000180 3.0e-09 66.2 185 32.4
VMungo1127G1747 Vigna mungo HOM05D000293 ORTHO05D000180 3.9e-09 65.9 197 32.0
MD03G1099900 Malus domestica HOM05D000293 ORTHO05D000180 8.6e-09 64.7 93 45.2
Carub.0005s1197 Capsella rubella HOM05D000293 ORTHO05D000180 1.1e-08 64.3 188 29.8
Lj3g0012398 Lotus japonicus HOM05D000293 ORTHO05D000180 1.1e-08 64.3 176 34.1
Sabra16G0141700 Salix brachista HOM05D000293 ORTHO05D000180 1.1e-08 64.3 185 30.8
HanXRQChr06g0175941 Helianthus annuus HOM05D000293 ORTHO05D000180 1.5e-08 63.9 168 33.3
Hund18940 Selenicereus undatus HOM05D000293 ORTHO05D000180 1.5e-08 63.9 165 32.7
PGSC0003DMG402010883 Solanum tuberosum HOM05D000293 ORTHO05D000180 1.5e-08 63.9 174 31.0
AL5G24870 Arabidopsis lyrata HOM05D000293 ORTHO05D000180 3.3e-08 62.8 188 29.3
Ca_19191_v3 Cicer arietinum L. HOM05D000293 ORTHO05D000180 4.3e-08 62.4 83 42.2
ECA247G0247 Erigeron canadensis HOM05D000293 ORTHO05D000180 4.3e-08 62.4 170 36.5
Sp5g15520 Schrenkiella parvula HOM05D000293 ORTHO05D000180 4.3e-08 62.4 181 28.2
Sc21g0005470 Simmondsia chinensis HOM05D000293 ORTHO05D000180 4.3e-08 62.4 82 39.0
DCAR_018882 Daucus carota HOM05D000293 ORTHO05D000180 5.6e-08 62.0 163 30.1
RcHm_v2.0_Chr5g0062851 Rosa chinensis HOM05D000293 ORTHO05D000180 7.3e-08 61.6 98 41.8
Nn2g12890 Nelumbo nucifera HOM05D000293 ORTHO05D000180 9.5e-08 61.2 182 31.3
MD11G1114100 Malus domestica HOM05D000293 ORTHO05D000180 1.2e-07 60.8 93 40.9
THA.LOC104810803 Tarenaya hassleriana HOM05D000293 ORTHO05D000180 1.2e-07 60.8 100 38.0
Aqoxy4G03016 Aquilegia oxysepala HOM05D000293 ORTHO05D000180 1.6e-07 60.5 175 33.1
THA.LOC104814867 Tarenaya hassleriana HOM05D000293 ORTHO05D000180 2.1e-07 60.1 79 44.3
Oeu040292.1 Olea europaea HOM05D000293 ORTHO05D000180 3.6e-07 59.3 188 28.7
ClCG02G020440 Citrullus lanatus HOM05D000293 ORTHO05D000180 4.7e-07 58.9 71 46.5
FvH4_3g34960 Fragaria vesca HOM05D000293 ORTHO05D000180 4.7e-07 58.9 94 41.5
FAN11G2020 Fragaria x ananassa HOM05D000293 ORTHO05D000180 4.7e-07 58.9 94 41.5
FAN21G3826 Fragaria x ananassa HOM05D000293 ORTHO05D000180 4.7e-07 58.9 94 41.5
FAN25G3609 Fragaria x ananassa HOM05D000293 ORTHO05D000180 4.7e-07 58.9 94 41.5
ECA248G3348 Erigeron canadensis HOM05D000293 ORTHO05D000180 6.2e-07 58.5 185 29.7
Nitab4.5_0003179g0030 Nicotiana tabacum HOM05D000293 ORTHO05D000180 8.0e-07 58.2 166 34.9
Solyc06g005310.3 Solanum lycopersicum HOM05D000293 ORTHO05D000180 8.0e-07 58.2 172 29.7
Sopen06g001290 Solanum pennellii HOM05D000293 ORTHO05D000180 8.0e-07 58.2 171 29.2
SalBow2G1361 Salvia bowleyana HOM05D000293 ORTHO05D000180 1.1e-06 57.8 156 29.5
FAN16G3307 Fragaria x ananassa HOM05D000293 ORTHO05D000180 1.4e-06 57.4 98 40.8
AT3G46130 Arabidopsis thaliana HOM05D000293 ORTHO05D000180 1.8e-06 57.0 188 28.7
MSTRG.18593 Avicennia marina HOM05D000293 ORTHO05D000180 2.3e-06 56.6 170 31.2
MSTRG.17846 Avicennia marina HOM05D000293 ORTHO05D000180 6.8e-06 55.1 186 30.6
TAR623G0529 Trochodendron aralioides HOM05D000293 ORTHO05D000180 6.8e-06 55.1 103 31.1
BraA10t43784Z Brassica rapa HOM05D000293 ORTHO05D000180 8.9e-06 54.7 184 29.9
Gohir.A13G228900 Gossypium hirsutum HOM05D000293 ORTHO05D000180 8.9e-06 54.7 163 33.1
Gorai.013G265300 Gossypium raimondii HOM05D000293 ORTHO05D000180 8.9e-06 54.7 163 33.1
Lsat_1_v5_gn_8_78460 Lactuca sativa HOM05D000293 ORTHO05D000180 8.9e-06 54.7 188 31.9


User provided reference genes

Program Settings