Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046021 Camellia sinensis var. sinensis HOM05D006212 ORTHO05D008245 4.2e-147 524.6 257 100.0
Dinv31247 Davidia involucrata HOM05D006212 ORTHO05D008245 3.2e-123 445.3 280 78.9
vmacro10255 Vaccinium macrocarpon HOM05D006212 ORTHO05D008245 7.5e-120 434.1 280 75.7
Prupe.2G205800 Prunus persica HOM05D006212 ORTHO05D008245 2.4e-118 429.1 277 77.6
GSVIVG01016183001 Vitis vinifera HOM05D006212 ORTHO05D008245 5.3e-118 427.9 277 75.5
QL08p053276 Quercus lobata HOM05D006212 ORTHO05D008245 2.7e-117 425.6 274 77.0
TAR369G0250 Trochodendron aralioides HOM05D006212 ORTHO05D008245 1.0e-116 423.7 277 75.8
Hma1.2p1_0117F.1_g056390 Hydrangea macrophylla HOM05D006212 ORTHO05D008245 1.1e-115 420.2 277 74.7
Rhsim09G0146100 Rhododendron simsii HOM05D006212 ORTHO05D008245 1.5e-115 419.9 312 68.6
MD01G1100100 Malus domestica HOM05D006212 ORTHO05D008245 1.9e-115 419.5 277 74.4
Duzib114G0641 Durio zibethinus HOM05D006212 ORTHO05D008245 1.2e-114 416.8 274 75.2
Thecc.10G087900 Theobroma cacao HOM05D006212 ORTHO05D008245 2.1e-114 416.0 274 75.2
CAN.G459.26 Capsicum annuum HOM05D006212 ORTHO05D008245 4.7e-114 414.8 277 71.8
Cfa001784 Carpinus fangiana HOM05D006212 ORTHO05D008245 1.8e-113 412.9 277 73.6
Potri.010G229300 Populus trichocarpa HOM05D006212 ORTHO05D008245 2.3e-113 412.5 274 74.1
Nn6g35226 Nelumbo nucifera HOM05D006212 ORTHO05D008245 6.8e-113 411.0 277 74.4
CiPaw.01G266400 Carya illinoinensis HOM05D006212 ORTHO05D008245 1.5e-112 409.8 277 74.4
Eucgr.G02746 Eucalyptus grandis HOM05D006212 ORTHO05D008245 1.5e-112 409.8 278 71.6
Sopen11g003910 Solanum pennellii HOM05D006212 ORTHO05D008245 9.8e-112 407.1 277 71.5
TWI38G1180 Tripterygium wilfordii HOM05D006212 ORTHO05D008245 2.8e-111 405.6 274 73.7
arahy.Tifrunner.gnm1.ann1.MYE0E1 Arachis hypogaea HOM05D006212 ORTHO05D008245 3.7e-111 405.2 274 73.4
Gorai.009G305300 Gossypium raimondii HOM05D006212 ORTHO05D008245 6.3e-111 404.4 277 71.8
HanXRQChr14g0455751 Helianthus annuus HOM05D006212 ORTHO05D008245 6.3e-111 404.4 280 70.7
Haze_16761 Corylus avellana HOM05D006212 ORTHO05D008245 9.1e-110 400.6 300 67.3
VMungo0720G1989 Vigna mungo HOM05D006212 ORTHO05D008245 2.0e-109 399.4 274 71.9
arahy.Tifrunner.gnm1.ann1.KY2C4A Arachis hypogaea HOM05D006212 ORTHO05D008245 4.5e-109 398.3 277 71.1
MSTRG.27497 Avicennia marina HOM05D006212 ORTHO05D008245 4.5e-109 398.3 275 70.5
Cc02_g10690 Coffea canephora HOM05D006212 ORTHO05D008245 4.5e-109 398.3 278 69.4
DCAR_019069 Daucus carota HOM05D006212 ORTHO05D008245 4.5e-109 398.3 278 69.4
ClCG05G021340 Citrullus lanatus HOM05D006212 ORTHO05D008245 1.0e-108 397.1 274 71.9
Phvul.007G139400 Phaseolus vulgaris HOM05D006212 ORTHO05D008245 1.0e-108 397.1 274 70.8
Sc06g0002110 Simmondsia chinensis HOM05D006212 ORTHO05D008245 1.3e-108 396.7 278 68.3
SGA_v2.0_scaffold13G06519 Striga asiatica HOM05D006212 ORTHO05D008245 1.7e-108 396.4 276 69.9
Cpa.g.sc53.158 Carica papaya HOM05D006212 ORTHO05D008245 2.9e-108 395.6 285 70.9
Glyma.10G197000 Glycine max HOM05D006212 ORTHO05D008245 2.9e-108 395.6 274 71.2
RcHm_v2.0_Chr1g0362181 Rosa chinensis HOM05D006212 ORTHO05D008245 2.9e-108 395.6 274 70.8
Sabra10G0177800 Salix brachista HOM05D006212 ORTHO05D008245 5.0e-108 394.8 292 68.5
Sed0020526 Sechium edule HOM05D006212 ORTHO05D008245 5.0e-108 394.8 275 70.2
Oeu016301.1 Olea europaea HOM05D006212 ORTHO05D008245 6.5e-108 394.4 274 71.5
Lsat_1_v5_gn_2_103740 Lactuca sativa HOM05D006212 ORTHO05D008245 8.5e-108 394.0 279 68.1
ECA238G3613 Erigeron canadensis HOM05D006212 ORTHO05D008245 1.5e-107 393.3 279 68.8
FvH4_7g18370 Fragaria vesca HOM05D006212 ORTHO05D008245 3.2e-107 392.1 277 70.0
Lalb_Chr21g0312911 Lupinus albus HOM05D006212 ORTHO05D008245 4.2e-107 391.7 280 69.3
PSO339G2669 Papaver somniferum HOM05D006212 ORTHO05D008245 9.5e-107 390.6 285 69.1
Psat6g172720 Pisum sativum HOM05D006212 ORTHO05D008245 1.2e-106 390.2 277 70.0
FAN06G0602 Fragaria x ananassa HOM05D006212 ORTHO05D008245 2.7e-106 389.0 277 69.7
Migut.F01920 Erythranthe guttata HOM05D006212 ORTHO05D008245 3.6e-106 388.7 277 69.0
FAN03G1155 Fragaria x ananassa HOM05D006212 ORTHO05D008245 3.6e-106 388.7 277 69.7
FAN06G2367 Fragaria x ananassa HOM05D006212 ORTHO05D008245 1.4e-105 386.7 277 69.3
TPR.G37858 Trifolium pratense HOM05D006212 ORTHO05D008245 1.4e-105 386.7 274 69.3
CsaV3_5G035900 Cucumis sativus L. HOM05D006212 ORTHO05D008245 4.0e-105 385.2 274 70.1
SalBow4G3289 Salvia bowleyana HOM05D006212 ORTHO05D008245 4.0e-105 385.2 274 67.9
FAN10G1668 Fragaria x ananassa HOM05D006212 ORTHO05D008245 5.2e-105 384.8 273 70.0
Medtr1g090693 Medicago truncatula HOM05D006212 ORTHO05D008245 6.8e-105 384.4 277 69.7
THA.LOC104816441 Tarenaya hassleriana HOM05D006212 ORTHO05D008245 8.8e-105 384.0 275 68.0
Hund19796 Selenicereus undatus HOM05D006212 ORTHO05D008245 1.2e-104 383.6 277 66.8
Nitab4.5_0007723g0030 Nicotiana tabacum HOM05D006212 ORTHO05D008245 3.4e-104 382.1 252 74.6
AT5G04360 Arabidopsis thaliana HOM05D006212 ORTHO05D008245 1.7e-103 379.8 283 66.8
CARHR208930 Cardamine hirsuta HOM05D006212 ORTHO05D008245 1.7e-103 379.8 283 66.4
AL6G14000 Arabidopsis lyrata HOM05D006212 ORTHO05D008245 1.1e-102 377.1 283 66.1
Thhalv10012585m.g Eutrema salsugineum HOM05D006212 ORTHO05D008245 1.4e-102 376.7 283 66.1
COL.COLO4_09860 Corchorus olitorius HOM05D006212 ORTHO05D008245 4.1e-102 375.2 337 58.8
Carub.0006s0331 Capsella rubella HOM05D006212 ORTHO05D008245 7.0e-102 374.4 283 66.1
Ca_10444_v3 Cicer arietinum L. HOM05D006212 ORTHO05D008245 3.5e-101 372.1 266 70.3
Sp6g38370 Schrenkiella parvula HOM05D006212 ORTHO05D008245 3.5e-101 372.1 283 66.4
Aa31LG11G5260 Aethionema arabicum HOM05D006212 ORTHO05D008245 4.5e-101 371.7 275 67.3
AUR62006360 Chenopodium quinoa HOM05D006212 ORTHO05D008245 7.7e-101 370.9 280 63.9
A10p31720 Brassica napus HOM05D006212 ORTHO05D008245 8.6e-100 367.5 272 66.5
FAN01G0990 Fragaria x ananassa HOM05D006212 ORTHO05D008245 1.5e-99 366.7 277 66.1
C09p72420 Brassica napus HOM05D006212 ORTHO05D008245 3.6e-98 362.1 272 65.4
BraA10t45218Z Brassica rapa HOM05D006212 ORTHO05D008245 6.1e-98 361.3 269 66.2
Lj2A23T70 Lonicera japonica HOM05D006212 ORTHO05D008245 6.1e-98 361.3 209 82.3
Nitab4.5_0004987g0060 Nicotiana tabacum HOM05D006212 ORTHO05D008245 8.9e-97 357.5 236 74.2
ATR0329G025 Amborella trichopoda HOM05D006212 ORTHO05D008245 7.0e-94 347.8 273 64.1
BcaC06g32141 Brassica carinata HOM05D006212 ORTHO05D008245 4.3e-91 338.6 249 67.1
Solyc11g008040.3 Solanum lycopersicum HOM05D006212 ORTHO05D008245 2.8e-90 335.9 196 80.1
AUR62029688 Chenopodium quinoa HOM05D006212 ORTHO05D008245 5.2e-89 331.6 372 47.3
Os04g0164900 Oryza sativa ssp. japonica HOM05D006212 ORTHO05D008245 6.8e-89 331.3 272 60.7
EL10Ac7g17062 Beta vulgaris HOM05D006212 ORTHO05D008245 1.3e-87 327.0 277 58.5
Zm00001eb088740 Zea mays HOM05D006212 ORTHO05D008245 1.3e-87 327.0 272 59.2
A05p23200 Brassica napus HOM05D006212 ORTHO05D008245 2.2e-87 326.2 280 59.6
BraA05t21187Z Brassica rapa HOM05D006212 ORTHO05D008245 2.2e-87 326.2 280 59.6
Mapoly0043s0011 Marchantia polymorpha HOM05D006212 ORTHO05D008245 9.2e-86 320.9 274 57.7
Actinidia35775 Actinidia chinensis HOM05D006212 ORTHO05D008245 1.2e-85 320.5 249 67.5
Lj5g0009189 Lotus japonicus HOM05D006212 ORTHO05D008245 7.8e-85 317.8 208 76.4
Pp3c13_17460 Physcomitrium patens HOM05D006212 ORTHO05D008245 8.6e-84 314.3 275 57.8
Gohir.D05G290200 Gossypium hirsutum HOM05D006212 ORTHO05D008245 3.3e-83 312.4 207 73.9
SMO364G0199 Selaginella moellendorffii HOM05D006212 ORTHO05D008245 6.8e-81 304.7 274 55.8
FAN10G3474 Fragaria x ananassa HOM05D006212 ORTHO05D008245 3.4e-80 302.4 277 58.5
MELO3C034031.2 Cucumis melo HOM05D006212 ORTHO05D008245 5.4e-78 295.0 314 53.8
Aqoxy1G01105 Aquilegia oxysepala HOM05D006212 ORTHO05D008245 8.1e-66 254.6 173 72.3
Peaxi162Scf00982g00214 Petunia axillaris HOM05D006212 ORTHO05D008245 2.4e-62 243.0 150 75.3
SEGI_14076 Sequoiadendron giganteum HOM05D006212 ORTHO05D008245 2.8e-58 229.6 176 63.6
Gohir.A05G289000 Gossypium hirsutum HOM05D006212 ORTHO05D008245 4.9e-55 218.8 155 69.7
Ah.08g209700 Amaranthus hybridus HOM05D006212 ORTHO05D008245 2.5e-51 206.5 151 61.6
Atru.chr12.885 Acer truncatum HOM05D006212 ORTHO05D008245 3.3e-43 179.5 220 49.5
PRCOL_00002423 Prasinoderma coloniale HOM05D006212 ORTHO05D008245 2.1e-42 176.8 268 43.3
MD07G1166900 Malus domestica HOM05D006212 ORTHO05D008245 8.2e-42 174.9 251 47.8
Cre11.g476650 Chlamydomonas reinhardtii HOM05D006212 ORTHO05D008245 7.1e-38 161.8 281 35.6
AagrBONN_evm.TU.Sc2ySwM_368.1756 Anthoceros agrestis HOM05D006212 ORTHO05D008245 6.7e-12 75.5 46 76.1
Manes.10G051700 Manihot esculenta HOM05D006212 ORTHO05D008245 1.5e-11 74.3 63 63.5
Solyc11g008050.1 Solanum lycopersicum HOM05D006212 ORTHO05D008245 3.3e-11 73.2 48 70.8
Peaxi162Scf00982g00216 Petunia axillaris HOM05D006212 ORTHO05D008245 1.7e-10 70.9 43 76.7
ECA238G4402 Erigeron canadensis HOM05D000006 ORTHO05D000013 1.1e-09 68.2 104 40.4
Phvul.005G014100 Phaseolus vulgaris HOM05D006212 ORTHO05D008245 5.9e-08 62.4 33 81.8


User provided reference genes

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