Gene: FvH4_7g18370
General Information
Structural Information
- Species Fragaria vesca
- Gene Identifier FvH4_7g18370
- Transcript Identifier FvH4_7g18370.t3
- Gene Type Coding gene
- Location Fvb7 : 15362662-15372354 : negative
Gene Family Information
- ID HOM05D006212
- #Genes/#Species 128/91
- Phylogenetic origin
- ID ORTHO05D008245
- #Genes/#Species 121/91
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id FvH4_7g18370.v4.0.a2
- pacid 50676386
Descriptions
- Description 3.2.1.142//3.2.1.41 - Limit dextrinase / R-enzyme // Pullulanase / Pullulan 6-glucanohydrolase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0019252 | ISO | PLAZA Integrative Orthology | starch biosynthetic process | AT5G04360 |
| GO:0005983 | ISO | PLAZA Integrative Orthology | starch catabolic process | AT5G04360 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0051060 | IEA | InterPro | pullulanase activity | |
| GO:0010303 | ISO | PLAZA Integrative Orthology | limit dextrinase activity | AT5G04360 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT5G04360 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G04360 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004193 | Glycoside hydrolase, family 13, N-terminal |
| IPR024561 | Alpha-1,6-glucosidases, pullulanase-type, C-terminal |
| IPR014756 | Immunoglobulin E-set |
| IPR011839 | Alpha-1,6-glucosidases, pullulanase-type |
| IPR017853 | Glycoside hydrolase superfamily |
| IPR040671 | Pullulanase, N2 domain |
| IPR013783 | Immunoglobulin-like fold |
| IPR013780 | Glycosyl hydrolase, all-beta |
| IPR045041 | Pullulanase PULA-like |
| Mapman id | Description |
|---|---|
| 3.2.3.3.2.2 | Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.starch-debranching activities.pullulanase (PU1) |