Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045921 Camellia sinensis var. sinensis HOM05D006106 ORTHO05D007662 1.0e-205 721.1 839 100.0
CSS0036472 Camellia sinensis var. sinensis HOM05D006106 ORTHO05D007662 4.2e-196 689.1 831 99.2
Nn7g36310 Nelumbo nucifera HOM05D006106 ORTHO05D007662 9.9e-121 438.7 831 82.7
Dinv12500 Davidia involucrata HOM05D006106 ORTHO05D007662 3.2e-119 433.7 834 78.8
Haze_19847 Corylus avellana HOM05D006106 ORTHO05D007662 1.6e-115 421.4 821 76.9
GSVIVG01033271001 Vitis vinifera HOM05D006106 ORTHO05D007662 1.8e-114 417.9 832 82.6
Rhsim03G0026900 Rhododendron simsii HOM05D006106 ORTHO05D007662 2.2e-112 411.0 919 56.8
Actinidia39218 Actinidia chinensis HOM05D006106 ORTHO05D007662 3.8e-112 410.2 835 78.1
QL07p000909 Quercus lobata HOM05D006106 ORTHO05D007662 4.9e-112 409.8 790 80.6
Ciclev10004305m.g Citrus clementina HOM05D006106 ORTHO05D007662 1.1e-111 408.7 786 86.3
Cfa016809 Carpinus fangiana HOM05D001739 ORTHO05D006605 3.2e-111 407.1 789 86.7
TWI74G1340 Tripterygium wilfordii HOM05D006106 ORTHO05D007662 5.4e-111 406.4 778 83.9
Duzib128G0400 Durio zibethinus HOM05D006106 ORTHO05D007662 9.3e-111 405.6 811 84.0
Sc13g0001690 Simmondsia chinensis HOM05D006106 ORTHO05D007662 1.2e-110 405.2 824 77.5
Potri.006G049900 Populus trichocarpa HOM05D006106 ORTHO05D007662 6.6e-109 399.4 802 75.8
Hma1.2p1_1041F.1_g251060 Hydrangea macrophylla HOM05D006106 ORTHO05D007662 4.3e-108 396.7 785 76.1
Sabra06G0034800 Salix brachista HOM05D006106 ORTHO05D007662 7.3e-108 396.0 792 82.6
Atru.chr1.1113 Acer truncatum HOM05D006106 ORTHO05D007662 1.1e-106 392.1 823 82.4
Manes.08G051400 Manihot esculenta HOM05D006106 ORTHO05D007662 3.1e-106 390.6 791 84.7
Prupe.7G058400 Prunus persica HOM05D006106 ORTHO05D007662 3.4e-105 387.1 810 83.0
Sopen04g007960 Solanum pennellii HOM05D006106 ORTHO05D007662 1.7e-104 384.8 831 72.8
AUR62024458 Chenopodium quinoa HOM05D006106 ORTHO05D007662 3.8e-104 383.6 836 76.0
AUR62026047 Chenopodium quinoa HOM05D006106 ORTHO05D007662 1.2e-102 378.6 846 71.4
PSO384G4415 Papaver somniferum HOM05D006106 ORTHO05D007662 3.0e-101 374.0 845 79.9
Lsat_1_v5_gn_9_30580 Lactuca sativa HOM05D006106 ORTHO05D007662 3.9e-101 373.6 820 81.8
Lj1g0017753 Lotus japonicus HOM05D006106 ORTHO05D007662 5.1e-101 373.2 801 83.0
Nitab4.5_0000586g0120 Nicotiana tabacum HOM05D006106 ORTHO05D007662 5.1e-101 373.2 805 67.6
Gorai.009G450600 Gossypium raimondii HOM05D006106 ORTHO05D007662 2.5e-100 370.9 836 80.1
Lju124C42G9 Lonicera japonica HOM05D006106 ORTHO05D007662 2.5e-100 370.9 834 69.8
Gorai.009G383700 Gossypium raimondii HOM05D006106 ORTHO05D007662 5.6e-100 369.8 836 80.3
Cpa.g.sc224.2 Carica papaya HOM05D006106 ORTHO05D007662 2.1e-99 367.9 798 83.0
EL10Ac3g07098 Beta vulgaris HOM05D006106 ORTHO05D007662 2.8e-99 367.5 863 68.8
Aqoxy1G00233 Aquilegia oxysepala HOM05D006106 ORTHO05D007662 3.7e-99 367.1 803 82.4
FvH4_6g24060 Fragaria vesca HOM05D006106 ORTHO05D007662 3.7e-99 367.1 794 82.9
FAN05G2558 Fragaria x ananassa HOM05D006106 ORTHO05D007662 3.7e-99 367.1 793 83.1
ClCG10G015760 Citrullus lanatus HOM05D006106 ORTHO05D007662 1.8e-98 364.8 831 80.5
DCAR_009064 Daucus carota HOM05D006106 ORTHO05D007662 3.1e-98 364.0 830 66.3
Hund24702 Selenicereus undatus HOM05D006106 ORTHO05D007662 9.0e-98 362.5 784 71.0
MELO3C009803.2 Cucumis melo HOM05D006106 ORTHO05D007662 2.0e-97 361.3 784 83.4
MD12G1080100 Malus domestica HOM05D006106 ORTHO05D007662 4.9e-96 356.7 810 81.6
Migut.J01752 Erythranthe guttata HOM05D006106 ORTHO05D007662 8.4e-96 355.9 818 80.1
CsaV3_3G040680 Cucumis sativus L. HOM05D006106 ORTHO05D007662 2.5e-95 354.4 822 80.3
SGA_v2.0_scaffold105G30404 Striga asiatica HOM05D001739 ORTHO05D006605 1.6e-94 351.7 798 68.0
HanXRQChr10g0296661 Helianthus annuus HOM05D006106 ORTHO05D007662 2.1e-94 351.3 777 83.7
Glyma.03G136200 Glycine max HOM05D006106 ORTHO05D007662 6.0e-94 349.7 799 82.9
Eucgr.A02342 Eucalyptus grandis HOM05D006106 ORTHO05D007662 5.1e-93 346.7 747 63.6
Cc06_g17630 Coffea canephora HOM05D006106 ORTHO05D007662 1.6e-91 341.7 832 65.5
ECA247G0166 Erigeron canadensis HOM05D001739 ORTHO05D006605 1.1e-90 339.0 756 85.3
Medtr7g091410 Medicago truncatula HOM05D006106 ORTHO05D007662 2.4e-90 337.8 782 83.5
Phvul.001G131500 Phaseolus vulgaris HOM05D006106 ORTHO05D007662 1.2e-89 335.5 805 81.4
TPR.G3692 Trifolium pratense HOM05D006106 ORTHO05D007662 1.2e-86 325.5 785 74.8
Gohir.A04G032500 Gossypium hirsutum HOM05D006106 ORTHO05D007662 1.6e-86 325.1 804 70.1
Psat3g074120 Pisum sativum HOM05D006106 ORTHO05D007662 1.6e-86 325.1 785 74.9
RcHm_v2.0_Chr3g0482651 Rosa chinensis HOM05D006106 ORTHO05D007662 1.8e-85 321.6 797 80.6
Ah.04g151600 Amaranthus hybridus HOM05D006106 ORTHO05D007662 3.0e-85 320.9 833 69.4
PSO339G0809 Papaver somniferum HOM05D006106 ORTHO05D007662 1.1e-84 318.9 797 78.9
arahy.Tifrunner.gnm1.ann1.4I0CBR Arachis hypogaea HOM05D006106 ORTHO05D007662 1.1e-82 312.4 786 73.7
PGR004G1513 Punica granatum HOM05D006106 ORTHO05D007662 3.1e-82 310.8 792 80.3
HPP92_011279 Vanilla planifolia HOM05D006106 ORTHO05D007662 5.3e-82 310.1 784 78.3
AT2G41720 Arabidopsis thaliana HOM05D006106 ORTHO05D007662 2.9e-80 304.3 780 79.7
Ca_15068_v3 Cicer arietinum L. HOM05D006106 ORTHO05D007662 1.1e-79 302.4 744 83.3
Thhalv10016262m.g Eutrema salsugineum HOM05D006106 ORTHO05D007662 1.1e-79 302.4 780 79.9
Peaxi162Scf00130g00324 Petunia axillaris HOM05D006106 ORTHO05D007662 1.9e-79 301.6 836 70.5
AL4G40030 Arabidopsis lyrata HOM05D006106 ORTHO05D007662 4.2e-79 300.4 780 72.1
Aa31LG1G23740 Aethionema arabicum HOM05D006106 ORTHO05D007662 9.4e-79 299.3 779 64.2
CARHR136820 Cardamine hirsuta HOM05D006106 ORTHO05D007662 2.1e-78 298.1 780 77.7
arahy.Tifrunner.gnm1.ann1.HSF0DX Arachis hypogaea HOM05D006106 ORTHO05D007662 1.8e-77 295.0 786 80.5
A05p02440 Brassica napus HOM05D006106 ORTHO05D007662 2.0e-76 291.6 782 64.6
BraA05t19238Z Brassica rapa HOM05D006106 ORTHO05D007662 1.7e-75 288.5 783 70.2
C04p02890 Brassica napus HOM05D006106 ORTHO05D007662 1.4e-74 285.4 783 64.0
BolC4t21929H Brassica oleracea HOM05D006106 ORTHO05D007662 1.4e-74 285.4 783 64.0
Sp4g23970 Schrenkiella parvula HOM05D006106 ORTHO05D007662 5.3e-74 283.5 780 78.7
TAR623G1683 Trochodendron aralioides HOM05D006106 ORTHO05D007662 1.1e-71 275.8 355 77.5
Gohir.D05G383800 Gossypium hirsutum HOM05D006106 ORTHO05D007662 1.9e-71 275.0 352 78.4
Hma1.2p1_1041F.1_g251050 Hydrangea macrophylla HOM05D006106 ORTHO05D007662 3.2e-71 274.2 168 73.2
VMungo1383G2820 Vigna mungo HOM05D006106 ORTHO05D007662 1.2e-70 272.3 798 60.5
CAN.G676.31 Capsicum annuum HOM05D006106 ORTHO05D007662 4.7e-70 270.4 322 82.3
vmacro07842 Vaccinium macrocarpon HOM05D006106 ORTHO05D007662 6.1e-70 270.0 909 52.7
Oeu008911.1 Olea europaea HOM05D006106 ORTHO05D007662 1.1e-68 265.8 168 71.4
Thecc.05G152200 Theobroma cacao HOM05D006106 ORTHO05D007662 2.0e-68 265.0 679 90.0
CDE08G0810 Ceratophyllum demersum HOM05D006106 ORTHO05D007662 1.3e-67 262.3 333 76.9
Gohir.D05G352101 Gossypium hirsutum HOM05D006106 ORTHO05D007662 5.3e-66 256.9 180 66.1
ATR0188G017 Amborella trichopoda HOM05D006106 ORTHO05D007662 3.5e-65 254.2 774 73.6
Sed0021985 Sechium edule HOM05D006106 ORTHO05D007662 1.3e-64 252.3 376 73.1
Zm00001eb325040 Zea mays HOM05D006106 ORTHO05D007662 1.6e-62 245.4 783 76.2
FAN14G5662 Fragaria x ananassa HOM05D006106 ORTHO05D007662 1.7e-59 235.3 795 73.2
CiPaw.10G034000 Carya illinoinensis HOM05D006106 ORTHO05D007662 3.7e-59 234.2 158 70.9
Nitab4.5_0009615g0030 Nicotiana tabacum HOM05D006106 ORTHO05D007662 3.7e-59 234.2 331 77.9
HPP92_011301 Vanilla planifolia HOM05D006106 ORTHO05D007662 6.3e-59 233.4 332 75.3
Lalb_Chr01g0017341 Lupinus albus HOM05D006106 ORTHO05D007662 4.1e-58 230.7 182 60.4
Glyma.19G138101 Glycine max HOM05D006106 ORTHO05D007662 5.9e-57 226.9 197 59.4
Gohir.D05G352075 Gossypium hirsutum HOM05D006106 ORTHO05D007662 7.7e-57 226.5 155 68.4
Gohir.D05G383766 Gossypium hirsutum HOM05D006106 ORTHO05D007662 1.7e-56 225.3 155 68.4
QL07p000892 Quercus lobata HOM05D006106 ORTHO05D007662 3.8e-56 224.2 153 68.0
Nitab4.5_0009615g0040 Nicotiana tabacum HOM05D006106 ORTHO05D007662 6.5e-56 223.4 162 64.8
Solyc04g015950.3 Solanum lycopersicum HOM05D006106 ORTHO05D007662 6.5e-56 223.4 161 64.0
Carub.0004s2400 Capsella rubella HOM05D006106 ORTHO05D007662 4.7e-54 217.2 719 80.7
COL.COLO4_28304 Corchorus olitorius HOM05D006106 ORTHO05D007662 2.3e-53 214.9 160 63.8
THA.LOC104804858 Tarenaya hassleriana HOM05D006106 ORTHO05D007662 2.0e-49 201.8 155 56.1
Ca_08448_v3 Cicer arietinum L. HOM05D006106 ORTHO05D007662 1.3e-48 199.1 144 66.0
BcaNung06815 Brassica carinata HOM05D006106 ORTHO05D007662 3.2e-47 194.5 161 52.2
MBI17_g23175_MAGBIO Magnolia biondii HOM05D006106 ORTHO05D007662 6.3e-43 180.3 610 35.7
TAR623G1698 Trochodendron aralioides HOM05D006106 ORTHO05D007662 3.5e-41 174.5 113 70.8
Pp3c2_1940 Physcomitrium patens HOM05D006106 ORTHO05D007662 2.6e-36 158.3 122 61.5
BcaC02g12786 Brassica carinata HOM05D000138 ORTHO05D007692 9.8e-36 156.4 115 59.1
Mapoly0043s0117 Marchantia polymorpha HOM05D006106 ORTHO05D007662 1.3e-35 156.0 131 56.5
Os07g0213300 Oryza sativa ssp. japonica HOM05D006106 ORTHO05D007662 2.2e-35 155.2 144 43.8
AagrBONN_evm.TU.Sc2ySwM_344.4225 Anthoceros agrestis HOM05D006106 ORTHO05D007662 1.6e-33 149.1 118 57.6
Actinidia09323 Actinidia chinensis HOM05D001739 ORTHO05D006605 1.3e-32 146.0 116 59.5
Rhsim03G0026800 Rhododendron simsii HOM05D006106 ORTHO05D007662 1.7e-32 145.6 139 54.0
Rhsim03G0025700 Rhododendron simsii HOM05D006106 ORTHO05D007662 9.5e-31 139.8 169 46.2
CDE08G0364 Ceratophyllum demersum HOM05D006106 ORTHO05D007662 1.2e-30 139.4 116 56.9
MBI17_g23173_MAGBIO Magnolia biondii HOM05D006106 ORTHO05D007662 2.0e-28 132.1 87 70.1
CiPaw.10G033900 Carya illinoinensis HOM05D006106 ORTHO05D007662 3.4e-28 131.3 67 88.1
Gorai.003G091300 Gossypium raimondii HOM05D006106 ORTHO05D007662 2.9e-27 128.3 239 65.3
unitig_578.g15981 Utricularia gibba HOM05D006106 ORTHO05D007662 9.2e-26 123.2 119 46.2
Rhsim03G0026000 Rhododendron simsii HOM05D001739 ORTHO05D007662 3.0e-24 118.2 76 68.4
Rhsim03G0025500 Rhododendron simsii HOM05D006106 ORTHO05D007662 1.9e-23 115.5 76 67.1
CBR_g50368 Chara braunii HOM05D006106 ORTHO05D007662 1.2e-22 112.8 113 47.8
MELO3C031816.2 Cucumis melo HOM05D006106 ORTHO05D007662 5.8e-20 104.0 81 56.8
BcaNung06942 Brassica carinata HOM05D006106 ORTHO05D007662 3.5e-17 94.7 114 38.6
COL.COLO4_28306 Corchorus olitorius HOM05D006106 ORTHO05D007662 3.5e-17 94.7 115 47.0
MELO3C030027.2 Cucumis melo HOM05D006106 ORTHO05D007662 3.3e-15 88.2 66 60.6
Gohir.D03G068901 Gossypium hirsutum HOM05D006106 ORTHO05D007662 4.4e-12 77.8 46 76.1
Rhsim09G0172900 Rhododendron simsii HOM05D006106 ORTHO05D007662 7.3e-07 60.5 35 74.3


User provided reference genes

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