Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045866 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D112743 7.3e-59 230.3 114 100.0
CSS0034072 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D000514 2.0e-24 115.9 63 92.1
Actinidia16326 Actinidia chinensis HOM05D000561 ORTHO05D000514 1.1e-22 110.2 63 85.7
vmacro04206 Vaccinium macrocarpon HOM05D000561 ORTHO05D000514 1.4e-22 109.8 64 85.9
Rhsim13G0222000 Rhododendron simsii HOM05D000561 ORTHO05D000514 1.9e-22 109.4 63 84.1
Duzib150G0013 Durio zibethinus HOM05D000561 ORTHO05D000514 1.1e-19 100.1 61 83.6
Haze_23125 Corylus avellana HOM05D000561 ORTHO05D000514 7.3e-19 97.4 64 73.4
QL01p004975 Quercus lobata HOM05D000561 ORTHO05D000514 7.3e-19 97.4 64 73.4
COL.COLO4_24888 Corchorus olitorius HOM05D000561 ORTHO05D000514 9.6e-19 97.1 60 80.0
Duzib170G1122 Durio zibethinus HOM05D000561 ORTHO05D000514 1.3e-18 96.7 62 77.4
Cfa009761 Carpinus fangiana HOM05D000561 ORTHO05D000514 1.6e-18 96.3 64 73.4
CSS0013113 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D000514 3.6e-18 95.1 63 81.0
Gohir.D07G128800 Gossypium hirsutum HOM05D000561 ORTHO05D000514 4.0e-17 91.7 63 73.0
Gorai.001G139100 Gossypium raimondii HOM05D000561 ORTHO05D000514 4.0e-17 91.7 63 73.0
Gohir.A07G124500 Gossypium hirsutum HOM05D000561 ORTHO05D000514 5.3e-17 91.3 63 73.0
TWI34G1960 Tripterygium wilfordii HOM05D000561 ORTHO05D000514 5.3e-17 91.3 62 72.6
TAR636G2461 Trochodendron aralioides HOM05D000561 ORTHO05D000514 5.3e-17 91.3 64 71.9
Cpa.g.sc84.66 Carica papaya HOM05D000561 ORTHO05D000514 6.9e-17 90.9 62 72.6
MSTRG.21383 Avicennia marina HOM05D000561 ORTHO05D000514 1.2e-16 90.1 60 73.3
Thecc.09G232000 Theobroma cacao HOM05D000561 ORTHO05D000514 1.2e-16 90.1 62 72.6
Duzib168G0910 Durio zibethinus HOM05D000561 ORTHO05D000514 1.5e-16 89.7 62 75.8
Prupe.5G028700 Prunus persica HOM05D000561 ORTHO05D000514 1.5e-16 89.7 64 70.3
Oeu001477.2 Olea europaea HOM05D000003 ORTHO05D000514 2.6e-16 89.0 62 69.4
Aqoxy1G00237 Aquilegia oxysepala HOM05D000561 ORTHO05D000514 3.4e-16 88.6 64 67.2
Gohir.A08G013600 Gossypium hirsutum HOM05D000561 ORTHO05D000514 3.4e-16 88.6 64 73.4
Gohir.D08G024100 Gossypium hirsutum HOM05D000561 ORTHO05D000514 3.4e-16 88.6 64 73.4
Gorai.004G019500 Gossypium raimondii HOM05D000561 ORTHO05D000514 3.4e-16 88.6 64 73.4
HanXRQChr13g0405951 Helianthus annuus HOM05D000561 ORTHO05D000514 9.9e-16 87.0 59 72.9
Peaxi162Scf01398g00012 Petunia axillaris HOM05D000561 ORTHO05D000514 1.3e-15 86.7 63 68.3
Sopen11g025610 Solanum pennellii HOM05D000561 ORTHO05D000514 1.7e-15 86.3 63 66.7
Cc02_g33880 Coffea canephora HOM05D000561 ORTHO05D000514 2.2e-15 85.9 61 72.1
MBI01_g18892_MAGBIO Magnolia biondii HOM05D000561 ORTHO05D000514 3.8e-15 85.1 63 66.7
Nitab4.5_0006994g0030 Nicotiana tabacum HOM05D000561 ORTHO05D000514 3.8e-15 85.1 64 64.1
CANSAT54G1581 Cannabis sativa HOM05D000561 ORTHO05D000514 4.9e-15 84.7 64 65.6
Solyc11g065880.2 Solanum lycopersicum HOM05D000561 ORTHO05D000514 4.9e-15 84.7 63 65.1
CiPaw.14G119600 Carya illinoinensis HOM05D000561 ORTHO05D000514 8.4e-15 84.0 51 82.4
Nitab4.5_0005819g0030 Nicotiana tabacum HOM05D000561 ORTHO05D000514 1.1e-14 83.6 63 63.5
GSVIVG01025280001 Vitis vinifera HOM05D000561 ORTHO05D000514 1.1e-14 83.6 55 78.2
EL10Ac4g10266 Beta vulgaris HOM05D000561 ORTHO05D000514 1.4e-14 83.2 64 64.1
EL10Ac4g10282 Beta vulgaris HOM05D000561 ORTHO05D000514 1.4e-14 83.2 64 64.1
AUR62019286 Chenopodium quinoa HOM05D000561 ORTHO05D000514 1.4e-14 83.2 61 67.2
Nn2g15468 Nelumbo nucifera HOM05D000561 ORTHO05D000514 1.4e-14 83.2 62 64.5
PGSC0003DMG400007361 Solanum tuberosum HOM05D000561 ORTHO05D000514 1.4e-14 83.2 64 62.5
Migut.D00595 Erythranthe guttata HOM05D000561 ORTHO05D000514 1.9e-14 82.8 65 63.1
Hma1.2p1_0606F.1_g188060 Hydrangea macrophylla HOM05D000561 ORTHO05D000514 3.2e-14 82.0 85 56.5
Manes.14G001900 Manihot esculenta HOM05D000561 ORTHO05D000514 1.2e-13 80.1 62 66.1
Aa31LG11G5050 Aethionema arabicum HOM05D000561 ORTHO05D000514 1.6e-13 79.7 60 65.0
PSO339G4568 Papaver somniferum HOM05D000561 ORTHO05D000514 1.6e-13 79.7 63 66.7
Hund07519 Selenicereus undatus HOM05D000561 ORTHO05D000514 2.1e-13 79.3 58 67.2
Potri.009G054400 Populus trichocarpa HOM05D000561 ORTHO05D000514 2.7e-13 79.0 64 64.1
AT5G19350 Arabidopsis thaliana HOM05D000561 ORTHO05D000514 7.9e-13 77.4 60 63.3
Glyma.13G340200 Glycine max HOM05D000561 ORTHO05D000514 7.9e-13 77.4 65 61.5
ATR0605G067 Amborella trichopoda HOM05D000561 ORTHO05D000514 1.0e-12 77.0 54 63.0
PSO384G1656 Papaver somniferum HOM05D000561 ORTHO05D000514 1.0e-12 77.0 62 66.1
Oeu023360.2 Olea europaea HOM05D000030 ORTHO05D000009 1.8e-12 76.3 62 61.3
SalBow2G0499 Salvia bowleyana HOM05D000561 ORTHO05D000514 1.8e-12 76.3 63 60.3
Lsat_1_v5_gn_1_66300 Lactuca sativa HOM05D000561 ORTHO05D000514 2.3e-12 75.9 58 65.5
Glyma.15G034200 Glycine max HOM05D000561 ORTHO05D000514 3.0e-12 75.5 65 61.5
THA.LOC104811163 Tarenaya hassleriana HOM05D000561 ORTHO05D000514 3.0e-12 75.5 58 63.8
Ca_01295_v3 Cicer arietinum L. HOM05D000561 ORTHO05D000514 5.1e-12 74.7 61 63.9
MD03G1176800 Malus domestica HOM05D000561 ORTHO05D000514 6.7e-12 74.3 64 64.1
RcHm_v2.0_Chr3g0491021 Rosa chinensis HOM05D000561 ORTHO05D000514 6.7e-12 74.3 55 67.3
SalBow6G1629 Salvia bowleyana HOM05D000561 ORTHO05D000514 6.7e-12 74.3 63 58.7
AUR62000109 Chenopodium quinoa HOM05D000561 ORTHO05D000514 8.7e-12 73.9 61 60.7
Medtr2g097960 Medicago truncatula HOM05D000561 ORTHO05D000514 8.7e-12 73.9 64 59.4
DCAR_029947 Daucus carota HOM05D000561 ORTHO05D000514 1.1e-11 73.6 64 62.5
Os03g0174100 Oryza sativa ssp. japonica HOM05D000561 ORTHO05D000514 1.5e-11 73.2 63 57.1
PGR119G1727 Punica granatum HOM05D000561 ORTHO05D000514 1.5e-11 73.2 64 62.5
Atru.chr3.2740 Acer truncatum HOM05D000561 ORTHO05D000514 1.9e-11 72.8 49 73.5
ECA248G2811 Erigeron canadensis HOM05D000561 ORTHO05D000514 1.9e-11 72.8 56 66.1
Sabra09G0039700 Salix brachista HOM05D000561 ORTHO05D000514 2.5e-11 72.4 62 62.9
TPR.G6890 Trifolium pratense HOM05D000561 ORTHO05D000514 2.5e-11 72.4 65 60.0
MD11G1197600 Malus domestica HOM05D000561 ORTHO05D000514 3.3e-11 72.0 64 57.8
Phvul.L009343 Phaseolus vulgaris HOM05D000561 ORTHO05D000514 4.3e-11 71.6 62 61.3
AL6G30840 Arabidopsis lyrata HOM05D000561 ORTHO05D000514 5.6e-11 71.2 60 58.3
Psat5g286480 Pisum sativum HOM05D000561 ORTHO05D000514 7.4e-11 70.9 51 70.6
Zm00001eb005630 Zea mays HOM05D000561 ORTHO05D000514 7.4e-11 70.9 86 43.0
CSS0025411 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D000514 9.6e-11 70.5 55 63.6
CDE10G0196 Ceratophyllum demersum HOM05D000561 ORTHO05D000514 9.6e-11 70.5 59 62.7
arahy.Tifrunner.gnm1.ann1.Z4F097 Arachis hypogaea HOM05D000561 ORTHO05D000514 2.8e-10 68.9 63 57.1
arahy.Tifrunner.gnm1.ann1.GE7Z65 Arachis hypogaea HOM05D000561 ORTHO05D000514 3.6e-10 68.6 62 58.1
Ah.06g194320 Amaranthus hybridus HOM05D000561 ORTHO05D000514 6.2e-10 67.8 60 61.7
Glyma.11G133200 Glycine max HOM05D000561 ORTHO05D000514 1.1e-09 67.0 63 54.0
Sp6g25060 Schrenkiella parvula HOM05D000561 ORTHO05D000514 1.4e-09 66.6 60 55.0
Glyma.12G057300 Glycine max HOM05D000561 ORTHO05D000514 1.8e-09 66.2 63 52.4
Sed0011306 Sechium edule HOM05D000561 ORTHO05D000514 6.9e-09 64.3 61 55.7
VMungo1127G1920 Vigna mungo HOM05D000561 ORTHO05D000514 9.0e-09 63.9 63 52.4
Lj3g0003681 Lotus japonicus HOM05D000561 ORTHO05D000514 1.2e-08 63.5 63 47.6
Actinidia06901 Actinidia chinensis HOM05D000561 ORTHO05D000514 1.5e-08 63.2 35 85.7
BcaB01g05142 Brassica carinata HOM05D000561 ORTHO05D000514 2.6e-08 62.4 60 51.7
C03p11030 Brassica napus HOM05D000561 ORTHO05D000514 2.6e-08 62.4 60 51.7
BolC3t13572H Brassica oleracea HOM05D000561 ORTHO05D000514 2.6e-08 62.4 60 51.7
Phvul.011G059300 Phaseolus vulgaris HOM05D000561 ORTHO05D000514 2.6e-08 62.4 63 50.8
Lj3g0012879 Lotus japonicus HOM05D000561 ORTHO05D000514 3.4e-08 62.0 65 50.8
A03p09450 Brassica napus HOM05D000561 ORTHO05D000514 5.8e-08 61.2 60 50.0
BraA03t10263Z Brassica rapa HOM05D000561 ORTHO05D000514 5.8e-08 61.2 60 50.0
Lalb_Chr01g0003351 Lupinus albus HOM05D000561 ORTHO05D000514 5.8e-08 61.2 63 50.8
SGA_v2.0_scaffold247G44873 Striga asiatica HOM05D000561 ORTHO05D000514 5.8e-08 61.2 61 54.1
BcaNung07025 Brassica carinata HOM05D000561 ORTHO05D000514 9.9e-08 60.5 58 51.7
ClCG01G004050 Citrullus lanatus HOM05D000561 ORTHO05D000514 1.3e-07 60.1 54 61.1
Eucgr.J00778 Eucalyptus grandis HOM05D000561 ORTHO05D000514 1.3e-07 60.1 40 72.5
VMungo1080G0863 Vigna mungo HOM05D000561 ORTHO05D000514 1.3e-07 60.1 62 51.6
Pp3c12_10910 Physcomitrium patens HOM05D000561 ORTHO05D000514 1.7e-07 59.7 61 49.2
Pp3c12_10960 Physcomitrium patens HOM05D000561 ORTHO05D000514 1.7e-07 59.7 61 49.2
BcaB01g04865 Brassica carinata HOM05D000561 ORTHO05D000514 2.2e-07 59.3 58 50.0
A10p20330 Brassica napus HOM05D000561 ORTHO05D000514 8.4e-07 57.4 58 50.0
C09p56930 Brassica napus HOM05D000561 ORTHO05D000514 8.4e-07 57.4 58 50.0
BolC9t58547H Brassica oleracea HOM05D000561 ORTHO05D000514 8.4e-07 57.4 58 50.0
BraA10t44104Z Brassica rapa HOM05D000561 ORTHO05D000514 8.4e-07 57.4 58 50.0
Thhalv10013617m.g Eutrema salsugineum HOM05D000561 ORTHO05D000514 8.4e-07 57.4 62 46.8
Pp3c4_13300 Physcomitrium patens HOM05D000561 ORTHO05D000514 1.9e-06 56.2 52 55.8
Carub.0006s1769 Capsella rubella HOM05D000561 ORTHO05D000514 5.5e-06 54.7 58 51.7
SEGI_29644 Sequoiadendron giganteum HOM05D000561 ORTHO05D000514 7.1e-06 54.3 55 50.9


User provided reference genes

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