Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045787 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 3.3e-59 231.5 116 100.0
CSS0045587 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.5e-54 215.3 132 86.4
CSS0002074 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 8.5e-47 190.3 120 80.8
CSS0004389 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.2e-30 134.8 100 64.0
CSS0032111 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-29 132.9 100 63.0
CSS0001115 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.4e-28 129.8 100 60.0
CSS0006955 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.6e-27 125.6 100 64.0
CSS0014386 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.7e-27 123.6 99 57.6
CSS0037140 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.7e-26 122.9 99 59.6
CSS0017504 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.5e-22 107.8 82 64.6
CSS0044722 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 8.0e-21 104.0 94 47.9
CSS0023133 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.0e-20 103.6 94 47.9
CSS0033039 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.4e-20 103.2 93 48.4
CSS0007439 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.8e-20 102.8 93 49.5
CSS0010523 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.8e-20 102.8 94 46.8
CSS0043443 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.0e-20 102.1 94 48.9
CSS0027105 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.5e-19 99.8 94 47.9
CSS0016748 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 2.0e-19 99.4 94 47.9
CSS0026614 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.0e-19 99.4 94 45.7
CSS0046575 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.7e-19 97.8 94 47.9
CSS0041994 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 9.7e-19 97.1 94 50.0
CSS0020468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.8e-18 95.5 94 42.6
CSS0049818 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.8e-18 95.5 91 45.1
CSS0045195 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.7e-18 95.1 84 53.6
CSS0020179 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.3e-18 94.0 93 48.4
CSS0035385 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 8.3e-18 94.0 93 46.2
CSS0032088 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.4e-17 93.2 88 52.3
CSS0036731 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.8e-17 92.8 94 46.8
CSS0047834 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.4e-17 92.4 93 47.3
CSS0032736 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.1e-17 92.0 94 47.9
CSS0010509 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.6e-16 89.7 93 41.9
CSS0007605 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.7e-16 89.0 93 44.1
CSS0041590 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.7e-16 89.0 94 45.7
CSS0016144 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.5e-16 88.2 100 45.0
CSS0009370 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.9e-15 85.5 91 42.9
CSS0038037 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.9e-15 85.5 91 42.9
CSS0032809 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 6.5e-15 84.3 90 43.3
CSS0028214 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 8.5e-15 84.0 88 43.2
CSS0006381 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.2e-14 81.6 78 44.9
CSS0013630 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.2e-14 81.6 86 50.0
CSS0037375 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 5.5e-14 81.3 90 41.1
CSS0029354 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.4e-14 80.5 94 42.6
CSS0041944 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 9.4e-14 80.5 90 40.0
CSS0028054 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 1.6e-13 79.7 90 40.0
CSS0032702 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.1e-13 79.3 86 44.2
CSS0016336 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.7e-13 79.0 86 39.5
CSS0049107 Camellia sinensis var. sinensis HOM05D006120 ORTHO05D007913 2.7e-13 79.0 93 39.8
CSS0048939 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.7e-13 78.2 83 42.2
vmacro01816 Vaccinium macrocarpon HOM05D000489 ORTHO05D000372 8.0e-13 77.4 91 40.7
vmacro14890 Vaccinium macrocarpon HOM05D002989 ORTHO05D003218 3.0e-12 75.5 81 45.7
CSS0027359 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.0e-12 75.1 103 36.9
Actinidia35690 Actinidia chinensis HOM05D000003 ORTHO05D000022 1.5e-11 73.2 102 40.2
CSS0001881 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 2.0e-11 72.8 90 38.9
CSS0015976 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 2.6e-11 72.4 91 36.3
CSS0049549 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 9.8e-11 70.5 90 36.7
CSS0049418 Camellia sinensis var. sinensis HOM05D001185 ORTHO05D003777 2.2e-10 69.3 98 37.8
Actinidia03487 Actinidia chinensis HOM05D000003 ORTHO05D000022 2.8e-10 68.9 78 39.7
CSS0020344 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 2.8e-10 68.9 82 37.8
CSS0028114 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.8e-10 68.9 76 42.1
CSS0038564 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.8e-10 68.9 73 42.5
vmacro16872 Vaccinium macrocarpon HOM05D000003 ORTHO05D000022 4.8e-10 68.2 96 39.6
Nitab4.5_0007519g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000022 8.3e-10 67.4 101 36.6
Atru.chr10.629 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-09 67.0 86 39.5
CSS0036470 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 1.1e-09 67.0 77 42.9
Sopen10g008360 Solanum pennellii HOM05D000003 ORTHO05D000022 1.1e-09 67.0 101 39.6
vmacro09610 Vaccinium macrocarpon HOM05D000003 ORTHO05D000007 1.1e-09 67.0 91 38.5
Nitab4.5_0007388g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000022 1.8e-09 66.2 101 35.6
CSS0039165 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.4e-09 65.9 63 47.6
CSS0031232 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 5.4e-09 64.7 66 45.5
vmacro08191 Vaccinium macrocarpon HOM05D000548 ORTHO05D000987 7.0e-09 64.3 88 35.2
vmacro08980 Vaccinium macrocarpon HOM05D000055 ORTHO05D002202 9.1e-09 63.9 91 36.3
vmacro19136 Vaccinium macrocarpon HOM05D001065 ORTHO05D003103 9.1e-09 63.9 94 35.1
Nitab4.5_0012197g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000022 1.2e-08 63.5 101 34.7
vmacro06797 Vaccinium macrocarpon HOM05D000003 ORTHO05D000022 1.2e-08 63.5 97 36.1
CSS0034075 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.6e-08 63.2 65 43.1
vmacro11643 Vaccinium macrocarpon HOM05D000490 ORTHO05D000785 1.6e-08 63.2 93 36.6
vmacro18663 Vaccinium macrocarpon HOM05D000010 ORTHO05D000022 3.5e-08 62.0 75 41.3
Atru.chr7.668 Acer truncatum HOM05D000003 ORTHO05D000004 4.5e-08 61.6 90 35.6
Hma1.2p1_0931F.1_g238170 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 7.7e-08 60.8 85 40.0
Atru.chr3.3019 Acer truncatum HOM05D000003 ORTHO05D000022 1.0e-07 60.5 85 31.8
vmacro04810 Vaccinium macrocarpon HOM05D000301 ORTHO05D000022 1.3e-07 60.1 81 34.6
vmacro20205 Vaccinium macrocarpon HOM05D002235 ORTHO05D006252 1.3e-07 60.1 84 35.7
Atru.chr11.1308 Acer truncatum HOM05D000003 ORTHO05D000022 1.7e-07 59.7 89 31.5
Hma1.2p1_0333F.1_g128210 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 2.9e-07 58.9 88 39.8
Hma1.2p1_3263F.1_g334663 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 2.9e-07 58.9 88 39.8
Hma1.2p1_3263F.1_g334666 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 2.9e-07 58.9 88 39.8
COL.COLO4_19293 Corchorus olitorius HOM05D000155 ORTHO05D000022 3.8e-07 58.5 89 38.2
Atru.chr10.81 Acer truncatum HOM05D000003 ORTHO05D000004 5.0e-07 58.2 89 36.0
Atru.chr8.699 Acer truncatum HOM05D000003 ORTHO05D000022 5.0e-07 58.2 89 31.5
Nitab4.5_0000593g0300 Nicotiana tabacum HOM05D000003 ORTHO05D000022 5.0e-07 58.2 76 36.8
vmacro01820 Vaccinium macrocarpon HOM05D001647 ORTHO05D001191 5.0e-07 58.2 80 40.0
Atru.chr1.1701 Acer truncatum HOM05D000003 ORTHO05D000022 6.6e-07 57.8 89 36.0
Atru.chr3.2200 Acer truncatum HOM05D000003 ORTHO05D000022 6.6e-07 57.8 90 33.3
Lj2C63T5 Lonicera japonica HOM05D016027 ORTHO05D000022 6.6e-07 57.8 87 34.5
Lj9P217T13 Lonicera japonica HOM05D000003 ORTHO05D000022 8.6e-07 57.4 87 31.0
Atru.chr2.971 Acer truncatum HOM05D000003 ORTHO05D000022 1.1e-06 57.0 97 33.0
CSS0031822 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.1e-06 57.0 64 40.6
Atru.chr10.857 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-06 56.6 90 33.3
Atru.chr1.956 Acer truncatum HOM05D000003 ORTHO05D000006 1.9e-06 56.2 91 35.2
QL01p016530 Quercus lobata HOM05D000003 ORTHO05D000022 1.9e-06 56.2 80 33.8
Atru.chr2.1762 Acer truncatum HOM05D000003 ORTHO05D000022 2.5e-06 55.8 89 37.1
Atru.chr4.29 Acer truncatum HOM05D000003 ORTHO05D000022 2.5e-06 55.8 95 33.7
vmacro04538 Vaccinium macrocarpon HOM05D006275 ORTHO05D007839 2.5e-06 55.8 88 30.7
Atru.chr6.2848 Acer truncatum HOM05D000003 ORTHO05D000022 3.3e-06 55.5 89 36.0
COL.COLO4_27635 Corchorus olitorius HOM05D000003 ORTHO05D000022 3.3e-06 55.5 91 35.2
vmacro00419 Vaccinium macrocarpon HOM05D000003 ORTHO05D000022 3.3e-06 55.5 80 35.0
Prupe.6G118100 Prunus persica HOM05D000003 ORTHO05D000022 4.2e-06 55.1 89 37.1
Atru.chr12.663 Acer truncatum HOM05D000003 ORTHO05D000022 5.5e-06 54.7 89 34.8
Atru.chr1.1302 Acer truncatum HOM05D000003 ORTHO05D000004 7.2e-06 54.3 85 34.1
Atru.chr3.1879 Acer truncatum HOM05D000003 ORTHO05D000022 7.2e-06 54.3 85 30.6
Atru.chr4.172 Acer truncatum HOM05D000003 ORTHO05D000004 7.2e-06 54.3 79 32.9
Atru.chr1.1905 Acer truncatum HOM05D000003 ORTHO05D000022 9.5e-06 53.9 86 33.7
Atru.chr11.82 Acer truncatum HOM05D000003 ORTHO05D000022 9.5e-06 53.9 86 36.0
Atru.chr3.2393 Acer truncatum HOM05D000003 ORTHO05D000022 9.5e-06 53.9 89 32.6


User provided reference genes

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