Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045332 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 7.3e-73 277.3 161 100.0
Actinidia26953 Actinidia chinensis HOM05D006314 ORTHO05D007970 2.4e-44 182.6 127 81.1
Actinidia05538 Actinidia chinensis HOM05D006314 ORTHO05D007970 1.3e-40 170.2 127 81.9
Nn1g03656 Nelumbo nucifera HOM05D006314 ORTHO05D007970 3.1e-39 165.6 127 73.2
Potri.004G039400 Populus trichocarpa HOM05D006314 ORTHO05D007970 4.0e-39 165.2 127 76.4
Manes.14G141100 Manihot esculenta HOM05D006314 ORTHO05D007970 3.4e-38 162.2 127 73.2
Haze_06729 Corylus avellana HOM05D006314 ORTHO05D007970 4.5e-38 161.8 132 72.7
HanXRQChr05g0130041 Helianthus annuus HOM05D006314 ORTHO05D007970 4.5e-38 161.8 126 78.6
EL10Ac8g19905 Beta vulgaris HOM05D006314 ORTHO05D007970 7.6e-38 161.0 136 61.0
SGA_v2.0_scaffold7G03887 Striga asiatica HOM05D006314 ORTHO05D007970 2.2e-37 159.5 151 67.5
CiPaw.09G085200 Carya illinoinensis HOM05D006314 ORTHO05D007970 2.9e-37 159.1 120 72.5
CiPaw.09G086300 Carya illinoinensis HOM05D006314 ORTHO05D007970 2.9e-37 159.1 120 72.5
Cfa021643 Carpinus fangiana HOM05D006314 ORTHO05D007970 3.8e-37 158.7 129 73.6
ATR0618G448 Amborella trichopoda HOM05D006314 ORTHO05D007970 8.4e-37 157.5 124 75.0
Haze_06726 Corylus avellana HOM05D006314 ORTHO05D007970 1.1e-36 157.1 127 74.0
ECA236G4636 Erigeron canadensis HOM05D006314 ORTHO05D007970 1.1e-36 157.1 126 68.3
Sabra04G0024200 Salix brachista HOM05D006314 ORTHO05D007970 1.1e-36 157.1 144 55.6
GSVIVG01012621001 Vitis vinifera HOM05D006314 ORTHO05D007970 1.4e-36 156.8 127 71.7
Ciclev10018286m.g Citrus clementina HOM05D006314 ORTHO05D007970 1.9e-36 156.4 127 78.0
Hund21374 Selenicereus undatus HOM05D006314 ORTHO05D007970 1.9e-36 156.4 139 54.7
CANSAT56G1066 Cannabis sativa HOM05D006314 ORTHO05D007970 2.5e-36 156.0 129 76.0
Prupe.4G027100 Prunus persica HOM05D006314 ORTHO05D007970 2.5e-36 156.0 127 70.9
Nn5g27983 Nelumbo nucifera HOM05D006314 ORTHO05D007970 4.2e-36 155.2 125 60.0
Aqoxy5G01372 Aquilegia oxysepala HOM05D006314 ORTHO05D007970 5.5e-36 154.8 120 72.5
Gorai.010G176200 Gossypium raimondii HOM05D006314 ORTHO05D007970 1.2e-35 153.7 127 71.7
Ah.14g088200 Amaranthus hybridus HOM05D006314 ORTHO05D007970 1.6e-35 153.3 115 60.0
CAN.G404.73 Capsicum annuum HOM05D006314 ORTHO05D007970 2.1e-35 152.9 127 71.7
Lsat_1_v5_gn_7_17861 Lactuca sativa HOM05D006314 ORTHO05D007970 6.0e-35 151.4 126 75.4
PGR031G0385 Punica granatum HOM05D006314 ORTHO05D007970 7.9e-35 151.0 125 69.6
SalBow8G4748 Salvia bowleyana HOM05D006314 ORTHO05D007970 1.8e-34 149.8 124 72.6
BcaB01g01893 Brassica carinata HOM05D006314 ORTHO05D007970 3.0e-34 149.1 118 60.2
Solyc03g031560.4 Solanum lycopersicum HOM05D006314 ORTHO05D007970 3.0e-34 149.1 140 52.1
Gohir.A06G145000 Gossypium hirsutum HOM05D006314 ORTHO05D007970 3.9e-34 148.7 127 70.9
QL05p075316 Quercus lobata HOM05D006314 ORTHO05D007970 3.9e-34 148.7 127 70.1
COL.COLO4_31719 Corchorus olitorius HOM05D006314 ORTHO05D007970 5.1e-34 148.3 124 75.0
Eucgr.D00832 Eucalyptus grandis HOM05D006314 ORTHO05D007970 5.1e-34 148.3 125 67.2
AT4G05210 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 8.7e-34 147.5 118 58.5
Migut.M01276 Erythranthe guttata HOM05D006314 ORTHO05D007970 1.1e-33 147.1 127 75.6
AL6G48810 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 2.5e-33 146.0 118 57.6
BcaC04g21385 Brassica carinata HOM05D006314 ORTHO05D007970 2.5e-33 146.0 118 58.5
A09p25520 Brassica napus HOM05D006314 ORTHO05D007970 2.5e-33 146.0 118 58.5
C09p32430 Brassica napus HOM05D006314 ORTHO05D007970 2.5e-33 146.0 118 58.5
BolC9t56088H Brassica oleracea HOM05D006314 ORTHO05D007970 2.5e-33 146.0 118 58.5
Aa31LG9G9230 Aethionema arabicum HOM05D006314 ORTHO05D007970 5.7e-33 144.8 114 58.8
SEGI_37493 Sequoiadendron giganteum HOM05D006314 ORTHO05D007970 5.7e-33 144.8 124 54.8
AL7G32880 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 7.4e-33 144.4 118 61.0
BraA09t38127Z Brassica rapa HOM05D006314 ORTHO05D007970 1.3e-32 143.7 118 57.6
Carub.0007s2019 Capsella rubella HOM05D006314 ORTHO05D007970 1.3e-32 143.7 118 61.0
CARHR227820 Cardamine hirsuta HOM05D006314 ORTHO05D007970 1.6e-32 143.3 118 75.4
Sopen03g005440 Solanum pennellii HOM05D006314 ORTHO05D007970 2.8e-32 142.5 126 73.8
AT4G21220 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 4.8e-32 141.7 118 55.9
HPP92_009390 Vanilla planifolia HOM05D006314 ORTHO05D007970 1.1e-31 140.6 120 71.7
HPP92_009395 Vanilla planifolia HOM05D006314 ORTHO05D007970 1.1e-31 140.6 120 71.7
MD05G1340500 Malus domestica HOM05D006314 ORTHO05D007970 2.4e-31 139.4 127 69.3
Duzib235G0913 Durio zibethinus HOM05D006314 ORTHO05D007970 5.3e-31 138.3 138 64.5
Oeu002711.1 Olea europaea HOM05D006314 ORTHO05D007970 1.2e-30 137.1 126 73.0
Rhsim13G0158200 Rhododendron simsii HOM05D006314 ORTHO05D007970 1.2e-30 137.1 127 76.4
CDE05G2602 Ceratophyllum demersum HOM05D006314 ORTHO05D007970 3.4e-30 135.6 115 57.4
Thhalv10025838m.g Eutrema salsugineum HOM05D006314 ORTHO05D007970 3.4e-30 135.6 118 66.9
Pp3c4_25780 Physcomitrium patens HOM05D006314 ORTHO05D007970 7.6e-30 134.4 119 76.5
CsaV3_6G049280 Cucumis sativus L. HOM05D006314 ORTHO05D007970 1.3e-29 133.7 120 72.5
AUR62012635 Chenopodium quinoa HOM05D006314 ORTHO05D007970 1.7e-29 133.3 120 67.5
CBR_g20160 Chara braunii HOM05D006314 ORTHO05D007970 2.9e-29 132.5 133 72.2
FAN25G2977 Fragaria x ananassa HOM05D006314 ORTHO05D007970 2.9e-29 132.5 171 42.7
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 2.9e-29 132.5 108 61.1
DCAR_004187 Daucus carota HOM05D006314 ORTHO05D007970 3.8e-29 132.1 126 64.3
TAR627G0699 Trochodendron aralioides HOM05D006314 ORTHO05D007970 1.9e-28 129.8 99 79.8
FvH4_3g02730 Fragaria vesca HOM05D006314 ORTHO05D007970 7.2e-28 127.9 125 65.6
FAN21G1433 Fragaria x ananassa HOM05D006314 ORTHO05D007970 2.1e-27 126.3 149 46.3
Cpa.g.sc81.24 Carica papaya HOM05D006314 ORTHO05D007970 2.7e-27 125.9 123 50.4
RcHm_v2.0_Chr5g0004131 Rosa chinensis HOM05D006314 ORTHO05D007970 2.7e-27 125.9 125 64.8
Mapoly0013s0096 Marchantia polymorpha HOM05D006314 ORTHO05D007970 3.6e-27 125.6 119 65.5
ClCG01G022220 Citrullus lanatus HOM05D006314 ORTHO05D007970 6.1e-27 124.8 112 75.9
MELO3C007369.2 Cucumis melo HOM05D006314 ORTHO05D007970 1.8e-26 123.2 112 75.0
MBI02_g34312_MAGBIO Magnolia biondii HOM05D006314 ORTHO05D007970 2.3e-26 122.9 127 67.7
Cc00_g17320 Coffea canephora HOM05D006314 ORTHO05D007970 3.9e-26 122.1 126 67.5
Medtr7g047630 Medicago truncatula HOM05D006314 ORTHO05D007970 3.9e-26 122.1 119 69.7
Medtr7g451810 Medicago truncatula HOM05D006314 ORTHO05D007970 3.9e-26 122.1 119 69.7
SMO004G0010 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 1.5e-25 120.2 123 71.5
Lj1A1224T36 Lonicera japonica HOM05D006314 ORTHO05D007970 2.5e-25 119.4 110 76.4
vmacro03713 Vaccinium macrocarpon HOM05D006314 ORTHO05D007970 3.3e-25 119.0 60 85.0
THA.LOC104812945 Tarenaya hassleriana HOM05D006314 ORTHO05D007970 7.4e-25 117.9 118 65.3
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla HOM05D006314 ORTHO05D007970 2.2e-24 116.3 60 86.7
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis HOM05D006314 ORTHO05D007970 2.8e-24 115.9 124 68.5
PSO675G3227 Papaver somniferum HOM05D006314 ORTHO05D007970 2.8e-24 115.9 148 60.8
PSO541G6217 Papaver somniferum HOM05D006314 ORTHO05D007970 4.8e-24 115.2 148 59.5
Glyma.01G240700 Glycine max HOM05D006314 ORTHO05D007970 8.2e-24 114.4 120 60.8
Gohir.D06G151200 Gossypium hirsutum HOM05D006314 ORTHO05D007970 1.4e-23 113.6 60 85.0
Lj1g0010466 Lotus japonicus HOM05D006314 ORTHO05D007970 2.4e-23 112.8 126 57.9
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea HOM05D006314 ORTHO05D007970 4.1e-23 112.1 111 64.9
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea HOM05D006314 ORTHO05D007970 4.1e-23 112.1 111 64.9
Lalb_Chr16g0376341 Lupinus albus HOM05D006314 ORTHO05D007970 6.9e-23 111.3 124 63.7
VMungo1215G0781 Vigna mungo HOM05D006314 ORTHO05D007970 9.1e-23 110.9 124 58.1
Zm00001eb306890 Zea mays HOM05D006314 ORTHO05D007970 1.5e-22 110.2 120 67.5
Thecc.06G213300 Theobroma cacao HOM05D006314 ORTHO05D007970 3.4e-22 109.0 60 81.7
TPR.G10185 Trifolium pratense HOM05D006314 ORTHO05D007970 3.4e-22 109.0 119 67.2
Phvul.002G049200 Phaseolus vulgaris HOM05D006314 ORTHO05D007970 7.7e-22 107.8 124 57.3
Sp6g03780 Schrenkiella parvula HOM05D006314 ORTHO05D007970 6.5e-21 104.8 119 62.2
Glyma.11G002900 Glycine max HOM05D006314 ORTHO05D007970 2.1e-19 99.8 128 45.3
Ca_07429_v3 Cicer arietinum L. HOM05D006314 ORTHO05D007970 3.6e-19 99.0 111 63.1
PGSC0003DMG400005049 Solanum tuberosum HOM05D006314 ORTHO05D007970 1.0e-18 97.4 56 75.0
Peaxi162Scf00781g00047 Petunia axillaris HOM05D006314 ORTHO05D007970 1.8e-18 96.7 108 72.2
Nitab4.5_0000900g0100 Nicotiana tabacum HOM05D006314 ORTHO05D007970 3.0e-18 95.9 127 55.9
TWI38G0264 Tripterygium wilfordii HOM05D006314 ORTHO05D007970 8.8e-18 94.4 122 42.6
Dinv17838 Davidia involucrata HOM05D006314 ORTHO05D007970 1.3e-16 90.5 45 88.9
Nitab4.5_0004428g0040 Nicotiana tabacum HOM05D006314 ORTHO05D007970 1.7e-16 90.1 126 41.3
PRCOL_00005452 Prasinoderma coloniale HOM05D006314 ORTHO05D007970 1.7e-16 90.1 128 51.6
AUR62022021 Chenopodium quinoa HOM05D006314 ORTHO05D007970 1.8e-15 86.7 115 40.0
SMO361G0013 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 2.6e-14 82.8 109 68.8
Psat3g152680 Pisum sativum HOM05D006314 ORTHO05D007970 2.9e-13 79.3 43 79.1
FAN25G3594 Fragaria x ananassa HOM05D006314 ORTHO05D007970 1.4e-10 70.5 38 78.9
Sc05g0008810 Simmondsia chinensis HOM05D006314 ORTHO05D007970 5.2e-10 68.6 109 46.8


User provided reference genes

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