Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0045137 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 9.8e-135 483.4 235 100.0
CSS0031863 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 2.6e-87 325.9 251 68.1
CSS0017346 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 5.5e-69 265.0 189 75.7
CSS0049214 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 3.3e-66 255.8 184 75.5
CSS0048200 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 8.5e-62 241.1 157 80.9
Dinv37491 Davidia involucrata HOM05D006943 ORTHO05D008565 8.0e-36 154.8 162 56.8
Dinv38807 Davidia involucrata HOM05D006943 ORTHO05D008565 6.8e-35 151.8 158 57.6
Actinidia25739 Actinidia chinensis HOM05D006943 ORTHO05D008565 7.2e-29 131.7 153 52.9
TAR636G0756 Trochodendron aralioides HOM05D006943 ORTHO05D008565 5.2e-27 125.6 138 53.6
GSVIVG01035569001 Vitis vinifera HOM05D006943 ORTHO05D008565 7.5e-26 121.7 175 45.7
QL12p025818 Quercus lobata HOM05D006943 ORTHO05D008565 1.7e-25 120.6 175 44.0
Cpa.g.sc148.5 Carica papaya HOM05D006943 ORTHO05D008565 5.4e-24 115.5 150 46.7
TWI63G1698 Tripterygium wilfordii HOM05D006943 ORTHO05D008565 1.2e-23 114.4 138 47.8
Nn5g27072 Nelumbo nucifera HOM05D006943 ORTHO05D008565 3.5e-23 112.8 149 48.3
Manes.16G137900 Manihot esculenta HOM05D006943 ORTHO05D008565 4.5e-23 112.5 148 45.9
Haze_21789 Corylus avellana HOM05D006943 ORTHO05D008565 1.3e-22 110.9 145 48.3
Potri.018G002801 Populus trichocarpa HOM05D006943 ORTHO05D008565 2.3e-22 110.2 136 45.6
FvH4_2g36510 Fragaria vesca HOM05D006943 ORTHO05D008565 2.9e-22 109.8 172 43.0
FAN20G3130 Fragaria x ananassa HOM05D006943 ORTHO05D008565 5.0e-22 109.0 153 45.8
FAN27G2029 Fragaria x ananassa HOM05D006943 ORTHO05D008565 8.6e-22 108.2 171 43.3
Prupe.1G456500 Prunus persica HOM05D006943 ORTHO05D008565 8.6e-22 108.2 161 44.1
BcaB03g12686 Brassica carinata HOM05D006943 ORTHO05D008565 3.3e-21 106.3 142 45.8
Duzib168G0749 Durio zibethinus HOM05D006943 ORTHO05D008565 3.3e-21 106.3 148 43.9
FAN15G2754 Fragaria x ananassa HOM05D006943 ORTHO05D008565 3.3e-21 106.3 154 43.5
Sed0013911 Sechium edule HOM05D006943 ORTHO05D008565 3.3e-21 106.3 179 40.2
Potri.006G279100 Populus trichocarpa HOM05D006943 ORTHO05D008565 4.3e-21 105.9 120 46.7
ClCG05G026350 Citrullus lanatus HOM05D006943 ORTHO05D008565 1.2e-20 104.4 146 44.5
BcaC01g01105 Brassica carinata HOM05D006943 ORTHO05D008565 2.1e-20 103.6 142 43.7
C03p88130 Brassica napus HOM05D006943 ORTHO05D008565 2.1e-20 103.6 142 43.7
BolC3t21121H Brassica oleracea HOM05D006943 ORTHO05D008565 2.1e-20 103.6 142 43.7
Solyc08g069160.3 Solanum lycopersicum HOM05D006943 ORTHO05D008565 2.8e-20 103.2 140 42.9
Sopen08g022790 Solanum pennellii HOM05D006943 ORTHO05D008565 2.8e-20 103.2 140 42.9
A08p18750 Brassica napus HOM05D006943 ORTHO05D008565 3.6e-20 102.8 142 44.4
CsaV3_3G047250 Cucumis sativus L. HOM05D006943 ORTHO05D008565 3.6e-20 102.8 160 43.8
Cfa013306 Carpinus fangiana HOM05D006943 ORTHO05D008565 4.7e-20 102.4 116 50.0
Sc06g0001270 Simmondsia chinensis HOM05D006943 ORTHO05D008565 4.7e-20 102.4 159 44.0
PGSC0003DMG400029553 Solanum tuberosum HOM05D006943 ORTHO05D008565 4.7e-20 102.4 140 42.1
CANSAT35G2034 Cannabis sativa HOM05D006943 ORTHO05D008565 6.1e-20 102.1 164 40.9
Eucgr.C02135 Eucalyptus grandis HOM05D006943 ORTHO05D008565 6.1e-20 102.1 138 45.7
Eucgr.L02411 Eucalyptus grandis HOM05D006943 ORTHO05D008565 6.1e-20 102.1 138 45.7
BraA08t33836Z Brassica rapa HOM05D006943 ORTHO05D008565 1.0e-19 101.3 142 43.7
RcHm_v2.0_Chr6g0305361 Rosa chinensis HOM05D006943 ORTHO05D008565 1.4e-19 100.9 149 43.0
MELO3C003604.2 Cucumis melo HOM05D006943 ORTHO05D008565 1.8e-19 100.5 160 43.1
AT4G31270 Arabidopsis thaliana HOM05D006943 ORTHO05D008565 4.0e-19 99.4 145 42.1
EL10Ac2g03684 Beta vulgaris HOM05D006943 ORTHO05D008565 4.0e-19 99.4 141 43.3
Thhalv10025787m.g Eutrema salsugineum HOM05D006943 ORTHO05D008565 4.0e-19 99.4 135 45.2
Nitab4.5_0001942g0070 Nicotiana tabacum HOM05D006943 ORTHO05D008565 4.0e-19 99.4 142 39.4
Aa31LG2G19090 Aethionema arabicum HOM05D006943 ORTHO05D008565 5.2e-19 99.0 140 44.3
THA.LOC104803585 Tarenaya hassleriana HOM05D006943 ORTHO05D008565 5.2e-19 99.0 148 43.2
CAN.G480.10 Capsicum annuum HOM05D006943 ORTHO05D008565 1.2e-18 97.8 135 42.2
AL7G20800 Arabidopsis lyrata HOM05D006943 ORTHO05D008565 2.0e-18 97.1 145 41.4
Hund03260 Selenicereus undatus HOM05D006943 ORTHO05D008565 2.0e-18 97.1 179 36.3
MD08G1124900 Malus domestica HOM05D006943 ORTHO05D008565 3.4e-18 96.3 134 43.3
Carub.0007s0929 Capsella rubella HOM05D006943 ORTHO05D008565 4.4e-18 95.9 146 41.1
Sp7g29130 Schrenkiella parvula HOM05D006943 ORTHO05D008565 4.4e-18 95.9 137 42.3
MD15G1104200 Malus domestica HOM05D006943 ORTHO05D008565 5.7e-18 95.5 134 41.0
Ah.11g044140 Amaranthus hybridus HOM05D006943 ORTHO05D008565 9.8e-18 94.7 147 39.5
AUR62020649 Chenopodium quinoa HOM05D006943 ORTHO05D008565 6.4e-17 92.0 158 39.2
Lalb_Chr22g0361191 Lupinus albus HOM05D006943 ORTHO05D008565 8.3e-17 91.7 154 40.3
AUR62038724 Chenopodium quinoa HOM05D006943 ORTHO05D008565 1.4e-16 90.9 158 39.2
AUR62043827 Chenopodium quinoa HOM05D006943 ORTHO05D008565 1.4e-16 90.9 158 39.2
Aqoxy7G02511 Aquilegia oxysepala HOM05D006943 ORTHO05D008565 3.2e-16 89.7 139 35.3
CARHR239150 Cardamine hirsuta HOM05D006943 ORTHO05D008565 3.2e-16 89.7 134 44.0
MBI16_g00837_MAGBIO Magnolia biondii HOM05D006943 ORTHO05D008565 3.2e-16 89.7 139 41.0
PSO063G4511 Papaver somniferum HOM05D006943 ORTHO05D008565 5.4e-16 89.0 134 41.0
arahy.Tifrunner.gnm1.ann1.HML22G Arachis hypogaea HOM05D006943 ORTHO05D008565 9.2e-16 88.2 122 42.6
Lsat_1_v5_gn_3_68681 Lactuca sativa HOM05D006943 ORTHO05D008565 1.2e-15 87.8 178 36.0
Nitab4.5_0005058g0010 Nicotiana tabacum HOM05D006943 ORTHO05D008565 1.2e-15 87.8 134 36.6
PSO170G5679 Papaver somniferum HOM05D006943 ORTHO05D008565 1.2e-15 87.8 134 40.3
Peaxi162Scf00213g00939 Petunia axillaris HOM05D006943 ORTHO05D008565 1.2e-15 87.8 141 36.2
Ciclev10009072m.g Citrus clementina HOM05D006943 ORTHO05D008565 2.0e-15 87.0 137 43.1
arahy.Tifrunner.gnm1.ann1.X8DLDE Arachis hypogaea HOM05D006943 ORTHO05D008565 2.7e-15 86.7 123 41.5
Cc10_g14290 Coffea canephora HOM05D006943 ORTHO05D008565 3.5e-15 86.3 163 35.0
ECA246G0365 Erigeron canadensis HOM05D006943 ORTHO05D008565 1.9e-13 80.5 132 41.7
Atru.chr7.2692 Acer truncatum HOM05D006943 ORTHO05D008565 9.5e-13 78.2 138 39.1
HPP92_021992 Vanilla planifolia HOM05D006943 ORTHO05D008565 9.5e-13 78.2 132 38.6
HanXRQChr03g0081291 Helianthus annuus HOM05D006943 ORTHO05D008565 2.8e-12 76.6 161 37.3
CDE02G0425 Ceratophyllum demersum HOM05D006943 ORTHO05D008565 3.6e-12 76.3 133 38.3
DCAR_004562 Daucus carota HOM05D006943 ORTHO05D008565 4.7e-12 75.9 190 32.6
Lsat_1_v5_gn_5_56401 Lactuca sativa HOM05D006943 ORTHO05D008565 4.7e-12 75.9 137 39.4
HanXRQChr17g0539241 Helianthus annuus HOM05D006943 ORTHO05D008565 1.8e-11 73.9 142 36.6
ATR0626G281 Amborella trichopoda HOM05D006943 ORTHO05D008565 6.8e-11 72.0 117 38.5
Oeu008780.1 Olea europaea HOM05D006943 ORTHO05D008565 1.2e-10 71.2 216 30.6
Phvul.001G077900 Phaseolus vulgaris HOM05D006943 ORTHO05D008565 2.6e-10 70.1 198 30.3
ECA240G4190 Erigeron canadensis HOM05D006943 ORTHO05D008565 4.4e-10 69.3 80 46.2
Medtr1g009220 Medicago truncatula HOM05D006943 ORTHO05D008565 1.3e-09 67.8 78 47.4
Ca_01518_v3 Cicer arietinum L. HOM05D006943 ORTHO05D008565 2.9e-09 66.6 132 35.6
VMungo0647G1044 Vigna mungo HOM05D006943 ORTHO05D008565 3.7e-09 66.2 135 34.8
Glyma.14G138000 Glycine max HOM05D006943 ORTHO05D008565 4.9e-09 65.9 87 44.8
TPR.G11968 Trifolium pratense HOM05D006943 ORTHO05D008565 1.1e-08 64.7 165 30.9
Glyma.17G194700 Glycine max HOM05D006943 ORTHO05D008565 1.9e-08 63.9 87 44.8
COL.COLO4_18631 Corchorus olitorius HOM05D006943 ORTHO05D008565 3.2e-08 63.2 150 34.7
Lj5g0018295 Lotus japonicus HOM05D006943 ORTHO05D008565 3.2e-08 63.2 159 34.0
MSTRG.13940 Avicennia marina HOM05D006943 ORTHO05D008565 1.6e-07 60.8 77 41.6
MSTRG.13929 Avicennia marina HOM05D006943 ORTHO05D008565 2.0e-07 60.5 75 42.7
Psat6g033160 Pisum sativum HOM05D006943 ORTHO05D008565 2.0e-07 60.5 131 34.4
SalBow8G0710 Salvia bowleyana HOM05D006943 ORTHO05D008565 2.0e-07 60.5 78 41.0
Migut.E01408 Erythranthe guttata HOM05D006943 ORTHO05D008565 4.6e-07 59.3 135 35.6
Migut.E01420 Erythranthe guttata HOM05D006943 ORTHO05D008565 4.6e-07 59.3 135 35.6
Zm00001eb233350 Zea mays HOM05D006943 ORTHO05D008565 2.3e-06 57.0 131 28.2
Os02g0174300 Oryza sativa ssp. japonica HOM05D006943 ORTHO05D008565 3.0e-06 56.6 120 29.2


User provided reference genes

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