Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044690 Camellia sinensis var. sinensis HOM05D001988 ORTHO05D019859 3.0e-102 375.2 187 100.0
Actinidia07284 Actinidia chinensis HOM05D001988 ORTHO05D006298 3.0e-46 189.1 141 69.5
CSS0034246 Camellia sinensis var. sinensis HOM05D001988 ORTHO05D006298 1.7e-41 173.3 139 67.6
Hma1.2p1_0101F.1_g049570 Hydrangea macrophylla HOM05D001988 ORTHO05D006298 2.3e-41 172.9 141 64.5
Dinv33543 Davidia involucrata HOM05D001988 ORTHO05D006298 4.7e-39 165.2 141 65.2
Dinv18851 Davidia involucrata HOM05D001988 ORTHO05D006298 2.2e-36 156.4 141 62.4
Ciclev10028074m.g Citrus clementina HOM05D001988 ORTHO05D006298 3.2e-35 152.5 130 63.8
QL01p019440 Quercus lobata HOM05D001988 ORTHO05D006298 5.4e-35 151.8 140 60.0
Rhsim13G0196900 Rhododendron simsii HOM05D001988 ORTHO05D006298 1.6e-34 150.2 142 64.8
Haze_23572 Corylus avellana HOM05D001988 ORTHO05D006298 2.0e-34 149.8 141 59.6
Cfa010182 Carpinus fangiana HOM05D001988 ORTHO05D006298 1.0e-33 147.5 130 63.1
Oeu051473.1 Olea europaea HOM05D001988 ORTHO05D006298 3.9e-33 145.6 136 60.3
CiPaw.13G129100 Carya illinoinensis HOM05D001988 ORTHO05D006298 6.6e-33 144.8 140 58.6
MSTRG.17675 Avicennia marina HOM05D001988 ORTHO05D006298 8.6e-33 144.4 139 56.1
RcHm_v2.0_Chr5g0048681 Rosa chinensis HOM05D001988 ORTHO05D006298 4.3e-32 142.1 141 56.7
Eucgr.J00579 Eucalyptus grandis HOM05D001988 ORTHO05D006298 2.1e-31 139.8 142 55.6
vmacro03951 Vaccinium macrocarpon HOM05D001988 ORTHO05D006298 4.7e-31 138.7 142 59.2
Potri.009G017000 Populus trichocarpa HOM05D001988 ORTHO05D006298 6.2e-31 138.3 144 57.6
Peaxi162Scf00429g00122 Petunia axillaris HOM05D001988 ORTHO05D006298 1.0e-30 137.5 131 55.0
FvH4_3g26290 Fragaria vesca HOM05D001988 ORTHO05D006298 1.8e-30 136.7 141 54.6
Manes.04G062600 Manihot esculenta HOM05D001988 ORTHO05D006298 1.8e-30 136.7 141 55.3
Sabra09G0009700 Salix brachista HOM05D001988 ORTHO05D006298 2.3e-30 136.3 144 56.9
Nn6g34638 Nelumbo nucifera HOM05D001988 ORTHO05D006298 4.0e-30 135.6 139 56.1
arahy.Tifrunner.gnm1.ann1.JS7C8X Arachis hypogaea HOM05D001988 ORTHO05D006298 6.8e-30 134.8 140 55.0
arahy.Tifrunner.gnm1.ann1.Q3UIYI Arachis hypogaea HOM05D001988 ORTHO05D006298 8.9e-30 134.4 140 55.0
FAN11G2867 Fragaria x ananassa HOM05D001988 ORTHO05D006298 8.9e-30 134.4 140 53.6
FAN21G2899 Fragaria x ananassa HOM05D001988 ORTHO05D006298 1.5e-29 133.7 141 53.9
MD05G1034700 Malus domestica HOM05D001988 ORTHO05D006298 2.0e-29 133.3 142 57.0
TAR636G0458 Trochodendron aralioides HOM05D001988 ORTHO05D006298 2.0e-29 133.3 125 57.6
Lj3g0025777 Lotus japonicus HOM05D001988 ORTHO05D006298 2.6e-29 132.9 139 51.8
Hund18799 Selenicereus undatus HOM05D001988 ORTHO05D006298 2.6e-29 132.9 140 54.3
Phvul.011G099700 Phaseolus vulgaris HOM05D001988 ORTHO05D006298 4.4e-29 132.1 140 55.7
Thecc.09G271000 Theobroma cacao HOM05D001988 ORTHO05D006298 4.4e-29 132.1 138 55.8
Cpa.g.sc103.19 Carica papaya HOM05D001988 ORTHO05D006298 5.8e-29 131.7 144 54.9
Atru.chr3.3101 Acer truncatum HOM05D001988 ORTHO05D006298 7.5e-29 131.3 139 53.2
Glyma.12G095400 Glycine max HOM05D001988 ORTHO05D006298 2.2e-28 129.8 145 55.9
COL.COLO4_25404 Corchorus olitorius HOM05D001988 ORTHO05D006298 2.9e-28 129.4 139 54.7
Gohir.D09G099733 Gossypium hirsutum HOM05D001988 ORTHO05D006298 2.9e-28 129.4 137 56.2
Gorai.006G116700 Gossypium raimondii HOM05D001988 ORTHO05D006298 2.9e-28 129.4 137 56.2
VMungo1127G1842 Vigna mungo HOM05D001988 ORTHO05D006298 2.9e-28 129.4 140 55.0
Lalb_Chr03g0028461 Lupinus albus HOM05D001988 ORTHO05D006298 3.7e-28 129.0 139 51.1
MD10G1037500 Malus domestica HOM05D001988 ORTHO05D006298 1.9e-27 126.7 141 54.6
Gohir.A09G100300 Gossypium hirsutum HOM05D001988 ORTHO05D006298 2.4e-27 126.3 139 55.4
Lj2A953T34 Lonicera japonica HOM05D001988 ORTHO05D006298 2.4e-27 126.3 145 56.6
Nitab4.5_0007630g0020 Nicotiana tabacum HOM05D001988 ORTHO05D006298 2.4e-27 126.3 142 50.7
Ca_02972_v3 Cicer arietinum L. HOM05D001988 ORTHO05D006298 4.1e-27 125.6 142 52.1
SalBow3G3263 Salvia bowleyana HOM05D001988 ORTHO05D006298 5.4e-27 125.2 135 57.8
Nitab4.5_0002792g0050 Nicotiana tabacum HOM05D001988 ORTHO05D006298 9.2e-27 124.4 145 50.3
CsaV3_4G030600 Cucumis sativus L. HOM05D001988 ORTHO05D006298 1.2e-26 124.0 139 48.9
Duzib168G1815 Durio zibethinus HOM05D001988 ORTHO05D006298 1.6e-26 123.6 139 54.7
Glyma.11G175746 Glycine max HOM05D001988 ORTHO05D006298 1.6e-26 123.6 129 54.3
EL10Ac7g16285 Beta vulgaris HOM05D001988 ORTHO05D006298 2.0e-26 123.2 140 51.4
Aqoxy2G00626 Aquilegia oxysepala HOM05D001988 ORTHO05D006298 4.6e-26 122.1 144 51.4
ClCG04G002140 Citrullus lanatus HOM05D001988 ORTHO05D006298 6.0e-26 121.7 164 43.3
MELO3C026106.2 Cucumis melo HOM05D001988 ORTHO05D006298 6.0e-26 121.7 139 49.6
CsaV3_1G015690 Cucumis sativus L. HOM05D001988 ORTHO05D006298 7.8e-26 121.3 139 49.6
BcaC07g42533 Brassica carinata HOM05D001988 ORTHO05D006298 1.7e-25 120.2 138 52.2
FAN25G3604 Fragaria x ananassa HOM05D001988 ORTHO05D006298 1.7e-25 120.2 134 51.5
CANSAT54G0076 Cannabis sativa HOM05D001988 ORTHO05D006298 3.0e-25 119.4 138 51.4
Atru.chr3.3098 Acer truncatum HOM05D001988 ORTHO05D006298 5.0e-25 118.6 138 49.3
BcaB03g13337 Brassica carinata HOM05D001988 ORTHO05D006298 5.0e-25 118.6 138 52.2
Sed0009678 Sechium edule HOM05D001988 ORTHO05D006298 6.6e-25 118.2 140 49.3
PGR119G1622 Punica granatum HOM05D001988 ORTHO05D006298 1.1e-24 117.5 120 57.5
TPR.G4623 Trifolium pratense HOM05D001988 ORTHO05D006298 1.1e-24 117.5 142 50.0
Medtr4g050490 Medicago truncatula HOM05D001988 ORTHO05D006298 1.5e-24 117.1 142 49.3
Prupe.1G535500 Prunus persica HOM05D001988 ORTHO05D006298 1.9e-24 116.7 126 54.0
ClCG01G010890 Citrullus lanatus HOM05D001988 ORTHO05D006298 2.5e-24 116.3 139 46.8
Sc21g0006750 Simmondsia chinensis HOM05D001988 ORTHO05D006298 5.6e-24 115.2 137 50.4
CARHR008290 Cardamine hirsuta HOM05D001988 ORTHO05D006298 9.5e-24 114.4 139 46.8
Solyc11g071910.2 Solanum lycopersicum HOM05D001988 ORTHO05D006298 9.5e-24 114.4 146 46.6
BcaC07g38386 Brassica carinata HOM05D001988 ORTHO05D006298 1.2e-23 114.0 138 49.3
C08p11420 Brassica napus HOM05D001988 ORTHO05D006298 1.2e-23 114.0 138 49.3
BolC8t48823H Brassica oleracea HOM05D001988 ORTHO05D006298 1.2e-23 114.0 138 49.3
Sopen11g029580 Solanum pennellii HOM05D001988 ORTHO05D006298 3.6e-23 112.5 146 46.6
MELO3C008925.2 Cucumis melo HOM05D001988 ORTHO05D006298 4.7e-23 112.1 141 46.1
AL1G18820 Arabidopsis lyrata HOM05D001988 ORTHO05D006298 1.1e-22 110.9 138 47.1
PGSC0003DMG400003001 Solanum tuberosum HOM05D001988 ORTHO05D006298 1.1e-22 110.9 146 46.6
Cc01_g07790 Coffea canephora HOM05D001988 ORTHO05D006298 1.4e-22 110.5 138 48.6
Thhalv10007194m.g Eutrema salsugineum HOM05D001988 ORTHO05D006298 1.8e-22 110.2 138 50.0
A08p35180 Brassica napus HOM05D001988 ORTHO05D006298 2.3e-22 109.8 139 48.9
BraA08t35427Z Brassica rapa HOM05D001988 ORTHO05D006298 2.3e-22 109.8 139 48.9
AUR62001563 Chenopodium quinoa HOM05D001988 ORTHO05D006298 4.0e-22 109.0 136 47.1
THA.LOC104826449 Tarenaya hassleriana HOM05D001988 ORTHO05D006298 4.0e-22 109.0 143 51.7
Aa31sc314G30 Aethionema arabicum HOM05D001988 ORTHO05D006298 5.2e-22 108.6 139 49.6
AT1G08410 Arabidopsis thaliana HOM05D001988 ORTHO05D006298 1.2e-21 107.5 138 47.1
ECA238G3826 Erigeron canadensis HOM05D001988 ORTHO05D006298 1.2e-21 107.5 140 49.3
MBI12_g38624_MAGBIO Magnolia biondii HOM05D001988 ORTHO05D006298 1.2e-21 107.5 150 48.0
Ah.15g092110 Amaranthus hybridus HOM05D001988 ORTHO05D006298 1.5e-21 107.1 123 51.2
DCAR_006456 Daucus carota HOM05D001988 ORTHO05D006298 1.5e-21 107.1 135 48.9
Glyma.13G312200 Glycine max HOM05D001988 ORTHO05D006298 1.5e-21 107.1 139 49.6
AUR62020220 Chenopodium quinoa HOM05D001988 ORTHO05D006298 2.0e-21 106.7 138 44.9
Os12g0618300 Oryza sativa ssp. japonica HOM05D001988 ORTHO05D006298 2.0e-21 106.7 135 46.7
PSO384G2941 Papaver somniferum HOM05D001988 ORTHO05D006298 2.6e-21 106.3 133 46.6
Carub.0001s0776 Capsella rubella HOM05D001988 ORTHO05D006298 5.8e-21 105.1 138 47.1
PSO339G1785 Papaver somniferum HOM05D001988 ORTHO05D006298 9.8e-21 104.4 129 48.1
unitig_699.g19173 Utricularia gibba HOM05D001988 ORTHO05D006298 1.3e-20 104.0 139 46.8
Zm00001eb031980 Zea mays HOM05D001988 ORTHO05D006298 4.9e-20 102.1 135 45.2
Migut.G01069 Erythranthe guttata HOM05D001988 ORTHO05D006298 2.4e-19 99.8 146 43.2
Migut.N02439 Erythranthe guttata HOM05D001988 ORTHO05D006298 7.1e-19 98.2 163 39.9
CDE06G0259 Ceratophyllum demersum HOM05D001988 ORTHO05D006298 1.0e-17 94.4 145 44.1
HanXRQChr14g0431711 Helianthus annuus HOM05D001988 ORTHO05D006298 1.0e-17 94.4 138 44.2
Sp1g07060 Schrenkiella parvula HOM05D001988 ORTHO05D006298 2.3e-17 93.2 138 44.2
BolC8t52532H Brassica oleracea HOM05D001988 ORTHO05D019859 3.0e-17 92.8 89 58.4
Sed0023260 Sechium edule HOM05D001988 ORTHO05D006298 5.1e-17 92.0 141 39.7
Glyma.12G189600 Glycine max HOM05D001988 ORTHO05D006298 7.3e-16 88.2 126 47.6
A09p65920 Brassica napus HOM05D001988 ORTHO05D019859 4.7e-15 85.5 80 60.0
Lsat_1_v5_gn_2_35440 Lactuca sativa HOM05D001988 ORTHO05D006298 2.6e-13 79.7 150 36.0
GSVIVG01037592001 Vitis vinifera HOM05D001988 ORTHO05D006298 2.6e-13 79.7 89 51.7
Psat7g204840 Pisum sativum HOM05D001988 ORTHO05D006298 1.7e-12 77.0 142 38.0
ATR0006G002 Amborella trichopoda HOM05D001988 ORTHO05D006298 2.2e-12 76.6 161 37.3
Lalb_Chr19g0136211 Lupinus albus HOM05D001988 ORTHO05D006298 1.1e-11 74.3 110 47.3
HPP92_017736 Vanilla planifolia HOM05D001988 ORTHO05D006298 1.9e-11 73.6 124 39.5
SEGI_23026 Sequoiadendron giganteum HOM05D001988 ORTHO05D006298 4.1e-11 72.4 178 33.7
SGA_v2.0_scaffold268G46203 Striga asiatica HOM05D001988 ORTHO05D006298 2.3e-09 66.6 51 68.6
vmacro16109 Vaccinium macrocarpon HOM05D000504 ORTHO05D000403 1.2e-07 60.8 65 52.3
A04p20690 Brassica napus HOM05D001988 ORTHO05D006298 6.2e-07 58.5 108 43.5
Sp4g10000 Schrenkiella parvula HOM05D001988 ORTHO05D006298 6.2e-07 58.5 107 41.1


User provided reference genes

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