Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044256 Camellia sinensis var. sinensis HOM05D005817 ORTHO05D007140 2.1e-169 599.0 306 100.0
Actinidia01635 Actinidia chinensis HOM05D005817 ORTHO05D007140 3.6e-137 491.9 306 82.7
Hma1.2p1_0052F.1_g030020 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 5.4e-133 478.0 305 81.0
Rhsim05G0115500 Rhododendron simsii HOM05D005817 ORTHO05D007140 4.7e-129 464.9 351 71.8
Prupe.1G585700 Prunus persica HOM05D005817 ORTHO05D007140 2.0e-127 459.5 305 76.4
MD08G1248300 Malus domestica HOM05D005817 ORTHO05D007140 1.3e-126 456.8 305 75.7
Oeu028475.1 Olea europaea HOM05D005817 ORTHO05D007140 8.3e-126 454.1 306 75.2
Oeu028476.1 Olea europaea HOM05D005817 ORTHO05D007140 3.1e-125 452.2 306 74.8
Cc02_g23610 Coffea canephora HOM05D005817 ORTHO05D007140 1.6e-124 449.9 302 77.2
Nn5g27184 Nelumbo nucifera HOM05D005817 ORTHO05D007140 2.0e-124 449.5 300 77.3
vmacro19830 Vaccinium macrocarpon HOM05D005817 ORTHO05D007140 2.7e-124 449.1 282 81.6
MD15G1443200 Malus domestica HOM05D005817 ORTHO05D007140 3.5e-124 448.7 310 73.9
CiPaw.06G176700 Carya illinoinensis HOM05D005817 ORTHO05D007140 2.3e-123 446.0 304 75.7
PSO017G5300 Papaver somniferum HOM05D005817 ORTHO05D007140 2.3e-123 446.0 298 75.8
QL02p103359 Quercus lobata HOM05D005817 ORTHO05D007140 3.8e-123 445.3 305 76.7
CANSAT01G0715 Cannabis sativa HOM05D005817 ORTHO05D007140 6.6e-123 444.5 309 76.1
PSO170G5162 Papaver somniferum HOM05D005817 ORTHO05D007140 1.5e-122 443.4 298 75.2
Eucgr.I02797 Eucalyptus grandis HOM05D005817 ORTHO05D007140 2.5e-122 442.6 303 75.9
TAR376G0556 Trochodendron aralioides HOM05D005817 ORTHO05D007140 1.6e-121 439.9 300 75.3
RcHm_v2.0_Chr7g0219661 Rosa chinensis HOM05D005817 ORTHO05D007140 2.1e-121 439.5 305 73.8
TAR628G1209 Trochodendron aralioides HOM05D005817 ORTHO05D007140 3.6e-121 438.7 300 76.0
Thecc.06G019900 Theobroma cacao HOM05D005817 ORTHO05D007140 1.0e-120 437.2 302 76.5
CsaV3_5G027420 Cucumis sativus L. HOM05D005817 ORTHO05D007140 3.1e-120 435.6 298 77.5
Nitab4.5_0007689g0010 Nicotiana tabacum HOM05D005817 ORTHO05D007140 5.2e-120 434.9 306 74.2
Duzib160G0844 Durio zibethinus HOM05D005817 ORTHO05D007140 6.8e-120 434.5 302 76.5
Solyc01g103020.4 Solanum lycopersicum HOM05D005817 ORTHO05D007140 6.8e-120 434.5 306 74.5
Gohir.D06G122800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 2.0e-119 433.0 302 75.5
Atru.chr6.226 Acer truncatum HOM05D005817 ORTHO05D007140 5.8e-119 431.4 306 75.8
Aqoxy6G00025 Aquilegia oxysepala HOM05D005817 ORTHO05D007140 5.8e-119 431.4 298 75.5
Gorai.010G142900 Gossypium raimondii HOM05D005817 ORTHO05D007140 5.8e-119 431.4 302 75.2
Ca_13529_v3 Cicer arietinum L. HOM05D005817 ORTHO05D007140 7.5e-119 431.0 304 74.3
Gohir.A06G115800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 3.7e-118 428.7 302 74.8
Lj4g0018327 Lotus japonicus HOM05D005817 ORTHO05D007140 3.7e-118 428.7 304 73.7
PGSC0003DMG400020713 Solanum tuberosum HOM05D005817 ORTHO05D007140 3.7e-118 428.7 306 73.5
Lalb_Chr07g0176811 Lupinus albus HOM05D005817 ORTHO05D007140 6.4e-118 427.9 296 74.3
CAN.G855.54 Capsicum annuum HOM05D005817 ORTHO05D007140 1.9e-117 426.4 307 73.0
PGR142G3472 Punica granatum HOM05D005817 ORTHO05D007140 1.9e-117 426.4 303 72.9
Lsat_1_v5_gn_9_83341 Lactuca sativa HOM05D005817 ORTHO05D007140 9.2e-117 424.1 309 72.5
Phvul.003G075900 Phaseolus vulgaris HOM05D005817 ORTHO05D007140 1.2e-116 423.7 304 72.7
TWI14G0757 Tripterygium wilfordii HOM05D005817 ORTHO05D007140 1.2e-116 423.7 306 73.9
Ciclev10002025m.g Citrus clementina HOM05D005817 ORTHO05D007140 2.7e-116 422.5 306 75.2
FvH4_5g27830 Fragaria vesca HOM05D005817 ORTHO05D007140 3.5e-116 422.2 306 70.3
FAN18G1253 Fragaria x ananassa HOM05D005817 ORTHO05D007140 6.0e-116 421.4 306 70.3
EL10Ac6g13990 Beta vulgaris HOM05D005817 ORTHO05D007140 7.8e-116 421.0 297 73.1
SGA_v2.0_scaffold8G04460 Striga asiatica HOM05D005817 ORTHO05D007140 7.8e-116 421.0 307 71.0
Sed0006174 Sechium edule HOM05D005817 ORTHO05D007140 1.3e-115 420.2 300 73.0
TPR.G6004 Trifolium pratense HOM05D005817 ORTHO05D007140 1.3e-115 420.2 302 71.9
Psat4g000960 Pisum sativum HOM05D005817 ORTHO05D007140 1.7e-115 419.9 296 73.6
arahy.Tifrunner.gnm1.ann1.86KQ48 Arachis hypogaea HOM05D005817 ORTHO05D007140 5.0e-115 418.3 322 69.6
Lj9C259G5 Lonicera japonica HOM05D001465 ORTHO05D001434 6.6e-115 417.9 287 76.0
Haze_09983 Corylus avellana HOM05D005817 ORTHO05D007140 1.1e-114 417.2 369 62.6
Glyma.07G272500 Glycine max HOM05D005817 ORTHO05D007140 1.5e-114 416.8 297 73.7
COL.COLO4_31118 Corchorus olitorius HOM05D005817 ORTHO05D007140 1.9e-114 416.4 337 68.5
HanXRQChr15g0469671 Helianthus annuus HOM05D005817 ORTHO05D007140 3.3e-114 415.6 310 71.9
ATR1089G128 Amborella trichopoda HOM05D005817 ORTHO05D007140 4.3e-114 415.2 306 73.2
arahy.Tifrunner.gnm1.ann1.NEQE4P Arachis hypogaea HOM05D005817 ORTHO05D007140 5.6e-114 414.8 322 68.9
CDE07G1199 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.6e-113 413.3 301 75.1
Sp2g13800 Schrenkiella parvula HOM05D005817 ORTHO05D007140 1.6e-113 413.3 307 71.7
Carub.0005s0157 Capsella rubella HOM05D005817 ORTHO05D007140 4.7e-113 411.8 306 71.2
Migut.N00865 Erythranthe guttata HOM05D005817 ORTHO05D007140 8.9e-112 407.5 304 70.4
Thhalv10004677m.g Eutrema salsugineum HOM05D005817 ORTHO05D007140 2.6e-111 406.0 307 70.4
Dinv29679 Davidia involucrata HOM05D005817 ORTHO05D007140 3.4e-111 405.6 255 81.2
Medtr4g134630 Medicago truncatula HOM05D005817 ORTHO05D007140 3.4e-111 405.6 297 70.7
AT2G02570 Arabidopsis thaliana HOM05D005817 ORTHO05D007140 7.5e-111 404.4 306 69.3
Sabra01G0174300 Salix brachista HOM05D005817 ORTHO05D007140 3.7e-110 402.1 320 68.8
THA.LOC104824089 Tarenaya hassleriana HOM05D005817 ORTHO05D007140 6.4e-110 401.4 303 70.3
Ah.03g136770 Amaranthus hybridus HOM05D005817 ORTHO05D007140 1.4e-109 400.2 321 66.4
BcaC06g31224 Brassica carinata HOM05D005817 ORTHO05D007140 2.7e-108 396.0 301 69.1
BcaC03g17157 Brassica carinata HOM05D005817 ORTHO05D007140 1.3e-107 393.7 306 67.3
C07p33290 Brassica napus HOM05D005817 ORTHO05D007140 5.1e-107 391.7 299 68.9
BolC7t43840H Brassica oleracea HOM05D005817 ORTHO05D007140 5.1e-107 391.7 299 68.9
CDE08G0344 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.9e-106 389.8 296 69.6
FAN04G1604 Fragaria x ananassa HOM05D005817 ORTHO05D007140 1.9e-106 389.8 374 57.2
Peaxi162Scf00011g01920 Petunia axillaris HOM05D005817 ORTHO05D007140 1.9e-106 389.8 344 62.8
A06p43560 Brassica napus HOM05D005817 ORTHO05D007140 5.6e-106 388.3 299 68.6
Hund15375 Selenicereus undatus HOM05D005817 ORTHO05D007140 5.6e-106 388.3 275 72.7
AUR62043876 Chenopodium quinoa HOM05D005817 ORTHO05D007140 2.1e-105 386.3 278 72.7
GSVIVG01023145001 Vitis vinifera HOM05D005817 ORTHO05D007140 4.0e-104 382.1 255 77.3
BraA06t27241Z Brassica rapa HOM05D005817 ORTHO05D007140 3.4e-103 379.0 325 63.7
Actinidia26194 Actinidia chinensis HOM05D005817 ORTHO05D007140 9.9e-103 377.5 321 68.2
ClCG11G000310 Citrullus lanatus HOM05D005817 ORTHO05D007140 2.9e-102 375.9 316 67.4
ECA236G3641 Erigeron canadensis HOM05D000284 ORTHO05D000805 3.7e-102 375.6 283 70.7
MBI06_g16620_MAGBIO Magnolia biondii HOM05D005817 ORTHO05D007140 5.1e-99 365.2 259 72.6
Aa31LG2G7570 Aethionema arabicum HOM05D005817 ORTHO05D007140 6.6e-99 364.8 331 61.6
unitig_22.g6849 Utricularia gibba HOM05D005817 ORTHO05D007140 1.5e-98 363.6 340 59.4
Manes.07G030600 Manihot esculenta HOM05D005817 ORTHO05D007140 2.8e-97 359.4 255 73.7
C02p50820 Brassica napus HOM05D005817 ORTHO05D007140 6.8e-96 354.8 300 65.0
Glyma.17G001900 Glycine max HOM05D005817 ORTHO05D007140 2.6e-95 352.8 259 72.6
Manes.10G106400 Manihot esculenta HOM05D005817 ORTHO05D007140 1.7e-94 350.1 255 72.9
BolC2t11164H Brassica oleracea HOM05D005817 ORTHO05D007140 2.9e-94 349.4 303 63.7
FAN08G2336 Fragaria x ananassa HOM05D005817 ORTHO05D007140 2.9e-94 349.4 375 54.1
Potri.004G229200 Populus trichocarpa HOM05D005817 ORTHO05D007140 8.4e-94 347.8 255 70.6
Sopen01g045430 Solanum pennellii HOM05D005817 ORTHO05D007140 1.9e-93 346.7 219 78.1
SHI04993 Sapria himalayana HOM05D005817 ORTHO05D007140 4.2e-93 345.5 321 60.7
AL5G11840 Arabidopsis lyrata HOM05D005817 ORTHO05D007140 7.1e-93 344.7 264 68.2
Lj5C284T7 Lonicera japonica HOM05D005817 ORTHO05D007140 1.6e-92 343.6 209 83.3
Mapoly0107s0026 Marchantia polymorpha HOM05D005817 ORTHO05D007140 1.7e-91 340.1 303 61.4
VMungo1215G1434 Vigna mungo HOM05D005817 ORTHO05D007140 1.1e-90 337.4 206 79.6
AUR62032450 Chenopodium quinoa HOM05D005817 ORTHO05D007140 1.5e-90 337.0 283 65.4
Os08g0109900 Oryza sativa ssp. japonica HOM05D005817 ORTHO05D007140 1.5e-90 337.0 256 69.5
Nitab4.5_0003247g0070 Nicotiana tabacum HOM05D005817 ORTHO05D007140 1.2e-89 334.0 251 72.1
Duzib235G1547 Durio zibethinus HOM05D005817 ORTHO05D007140 8.1e-89 331.3 248 73.4
Sc03g0006230 Simmondsia chinensis HOM05D005817 ORTHO05D007140 1.4e-88 330.5 206 78.2
Aqoxy385s001 Aquilegia oxysepala HOM05D005817 ORTHO05D007140 5.3e-88 328.6 298 63.4
CDE04G1950 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 5.8e-87 325.1 258 69.8
HPP92_002041 Vanilla planifolia HOM05D005817 ORTHO05D007140 1.4e-85 320.5 263 65.8
A02p33050 Brassica napus HOM05D005817 ORTHO05D007140 9.3e-85 317.8 259 65.3
Cpa.g.sc173.14 Carica papaya HOM05D005817 ORTHO05D007140 3.9e-83 312.4 246 69.1
Hma1.2p1_0052F.1_g030010 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 3.9e-83 312.4 184 85.3
MSTRG.27880 Avicennia marina HOM05D005817 ORTHO05D007140 9.6e-82 307.8 232 70.7
Pp3c10_3580 Physcomitrium patens HOM05D005817 ORTHO05D007140 6.2e-81 305.1 324 52.5
CDE02G1227 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 2.9e-78 296.2 289 57.8
AagrBONN_evm.TU.Sc2ySwM_117.207 Anthoceros agrestis HOM05D005817 ORTHO05D007140 3.8e-78 295.8 293 54.3
BraA02t08326Z Brassica rapa HOM05D005817 ORTHO05D007140 1.9e-77 293.5 270 60.0
SMO117G0163 Selaginella moellendorffii HOM05D005817 ORTHO05D007140 2.6e-71 273.1 196 68.9
Pp3c14_9240 Physcomitrium patens HOM05D005817 ORTHO05D007140 2.9e-70 269.6 290 53.1
Lalb_Chr12g0195861 Lupinus albus HOM05D005817 ORTHO05D007140 8.4e-70 268.1 165 80.0
Pp3c10_3582 Physcomitrium patens HOM05D005817 ORTHO05D007140 4.6e-68 262.3 239 58.2
CBR_g40810 Chara braunii HOM05D005817 ORTHO05D007140 6.0e-68 261.9 342 45.9
MSTRG.601 Avicennia marina HOM05D005817 ORTHO05D007140 1.8e-67 260.4 208 63.5
Pp3c1_22040 Physcomitrium patens HOM05D005817 ORTHO05D007140 3.3e-66 256.1 279 52.3
RcHm_v2.0_Chr5g0068831 Rosa chinensis HOM05D005817 ORTHO05D007140 4.5e-63 245.7 156 80.1
Dinv29634 Davidia involucrata HOM05D005817 ORTHO05D007140 5.5e-61 238.8 160 75.0
Zm00001eb174130 Zea mays HOM05D005817 ORTHO05D007140 1.4e-51 207.6 129 81.4
VMungo0766G0001 Vigna mungo HOM05D005817 ORTHO05D007140 8.2e-33 145.2 125 60.8
Cre02.g106550 Chlamydomonas reinhardtii HOM05D005817 ORTHO05D007140 2.2e-30 137.1 335 33.4
MCO12G229 Micromonas commoda HOM05D005817 ORTHO05D007140 7.2e-29 132.1 303 31.4
PRCOL_00002712 Prasinoderma coloniale HOM05D005817 ORTHO05D007140 1.8e-19 100.9 329 30.1
SEGI_07435 Sequoiadendron giganteum HOM05D005817 ORTHO05D007140 8.8e-19 98.6 111 51.4
VMungo1148G0001 Vigna mungo HOM05D005817 ORTHO05D007140 1.5e-18 97.8 83 68.7
Lalb_Chr12g0195851 Lupinus albus HOM05D005817 ORTHO05D007140 8.9e-11 72.0 57 66.7
FvH4_3g40414 Fragaria vesca HOM05D005817 ORTHO05D007140 2.0e-10 70.9 57 59.6
Thhalv10005196m.g Eutrema salsugineum HOM05D005817 ORTHO05D007140 1.7e-09 67.8 52 67.3
CARHR145100 Cardamine hirsuta HOM05D005817 ORTHO05D007140 1.4e-08 64.7 73 53.4
COL.COLO4_38165 Corchorus olitorius HOM05D011921 ORTHO05D160408 1.6e-07 61.2 181 32.6
CDE04G0373 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 7.8e-07 58.9 46 71.7


User provided reference genes

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