Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044033 Camellia sinensis var. sinensis HOM05D005978 ORTHO05D007472 2.0e-89 332.4 166 100.0
Actinidia15540 Actinidia chinensis HOM05D005978 ORTHO05D007472 6.6e-53 211.1 123 86.2
Rhsim06G0000600 Rhododendron simsii HOM05D005978 ORTHO05D007472 1.7e-48 196.4 121 81.8
Dinv04443 Davidia involucrata HOM05D005978 ORTHO05D007472 9.3e-47 190.7 123 76.4
CiPaw.08G079000 Carya illinoinensis HOM05D005978 ORTHO05D007472 1.1e-44 183.7 123 72.4
Dinv30321 Davidia involucrata HOM05D005978 ORTHO05D007472 1.9e-44 183.0 123 74.0
vmacro21736 Vaccinium macrocarpon HOM05D005978 ORTHO05D007472 2.5e-44 182.6 123 75.6
Ciclev10003766m.g Citrus clementina HOM05D005978 ORTHO05D007472 3.6e-43 178.7 121 73.6
MD06G1000600 Malus domestica HOM05D005978 ORTHO05D007472 4.0e-42 175.3 123 74.0
Atru.chr13.20 Acer truncatum HOM05D005978 ORTHO05D007472 1.2e-41 173.7 123 71.5
QL02p016300 Quercus lobata HOM05D005978 ORTHO05D007472 3.4e-41 172.2 123 67.5
FvH4_5g26690 Fragaria vesca HOM05D005978 ORTHO05D007472 5.8e-41 171.4 123 69.9
FAN18G0791 Fragaria x ananassa HOM05D005978 ORTHO05D007472 5.8e-41 171.4 123 69.9
FAN13G0154 Fragaria x ananassa HOM05D005978 ORTHO05D007472 9.9e-41 170.6 123 70.7
COL.COLO4_12265 Corchorus olitorius HOM05D005978 ORTHO05D007472 1.3e-40 170.2 123 69.9
TAR376G0648 Trochodendron aralioides HOM05D005978 ORTHO05D007472 1.3e-40 170.2 121 72.7
Manes.18G000350 Manihot esculenta HOM05D005978 ORTHO05D007472 1.7e-40 169.9 121 69.4
Cc10_g00090 Coffea canephora HOM05D005978 ORTHO05D007472 3.8e-40 168.7 124 70.2
Thecc.08G097500 Theobroma cacao HOM05D005978 ORTHO05D007472 3.8e-40 168.7 123 71.5
Nn6g31553 Nelumbo nucifera HOM05D005978 ORTHO05D007472 6.4e-40 167.9 124 69.4
GSVIVG01013460001 Vitis vinifera HOM05D005978 ORTHO05D007472 6.4e-40 167.9 123 69.9
RcHm_v2.0_Chr7g0217581 Rosa chinensis HOM05D005978 ORTHO05D007472 2.4e-39 166.0 123 67.5
FAN04G0649 Fragaria x ananassa HOM05D005978 ORTHO05D007472 5.4e-39 164.9 123 68.3
Gohir.A05G177300 Gossypium hirsutum HOM05D005978 ORTHO05D007472 1.2e-38 163.7 123 69.1
Gohir.D05G180700 Gossypium hirsutum HOM05D005978 ORTHO05D007472 1.2e-38 163.7 123 69.1
Gorai.009G185700 Gossypium raimondii HOM05D005978 ORTHO05D007472 1.2e-38 163.7 123 69.1
MBI04_g23900_MAGBIO Magnolia biondii HOM05D005978 ORTHO05D007472 2.1e-38 162.9 121 67.8
Prupe.5G001100 Prunus persica HOM05D005978 ORTHO05D007472 4.6e-38 161.8 123 66.7
Duzib041G0071 Durio zibethinus HOM05D005978 ORTHO05D007472 6.7e-37 157.9 120 66.7
Potri.002G001700 Populus trichocarpa HOM05D005978 ORTHO05D007472 6.7e-37 157.9 123 62.6
Sabra02G0001200 Salix brachista HOM05D005978 ORTHO05D007472 1.5e-36 156.8 123 63.4
AL2G36770 Arabidopsis lyrata HOM05D005978 ORTHO05D007472 1.3e-35 153.7 123 60.2
Sp5g31790 Schrenkiella parvula HOM05D005978 ORTHO05D007472 1.3e-35 153.7 123 60.2
Eucgr.F03624 Eucalyptus grandis HOM05D005978 ORTHO05D007472 1.6e-35 153.3 123 63.4
Oeu013500.1 Olea europaea HOM05D005978 ORTHO05D007472 1.6e-35 153.3 121 66.9
PSO541G4404 Papaver somniferum HOM05D005978 ORTHO05D007472 2.1e-35 152.9 121 62.8
PSO675G6081 Papaver somniferum HOM05D005978 ORTHO05D007472 2.1e-35 152.9 121 62.8
Carub.0002s2353 Capsella rubella HOM05D005978 ORTHO05D007472 2.8e-35 152.5 123 60.2
Nitab4.5_0003364g0020 Nicotiana tabacum HOM05D005978 ORTHO05D007472 2.8e-35 152.5 123 65.0
ClCG11G019200 Citrullus lanatus HOM05D005978 ORTHO05D007472 3.7e-35 152.1 120 63.3
Cpa.g.sc36.98 Carica papaya HOM05D005978 ORTHO05D007472 6.2e-35 151.4 114 67.5
TWI36G1144 Tripterygium wilfordii HOM05D005978 ORTHO05D007472 8.1e-35 151.0 123 58.5
AT1G76630 Arabidopsis thaliana HOM05D005978 ORTHO05D007472 1.4e-34 150.2 123 59.3
MSTRG.14837 Avicennia marina HOM05D005978 ORTHO05D007472 3.1e-34 149.1 121 64.5
BraA07t31758Z Brassica rapa HOM05D005978 ORTHO05D007472 4.0e-34 148.7 123 59.3
Sopen04g036610 Solanum pennellii HOM05D005978 ORTHO05D007472 6.9e-34 147.9 123 63.4
Zm00001eb022830 Zea mays HOM05D005978 ORTHO05D007472 6.9e-34 147.9 120 62.5
C06p50880 Brassica napus HOM05D005978 ORTHO05D007472 9.0e-34 147.5 123 56.9
THA.LOC104812025 Tarenaya hassleriana HOM05D005978 ORTHO05D007472 9.0e-34 147.5 124 61.3
BcaC08g47175 Brassica carinata HOM05D005978 ORTHO05D007472 1.2e-33 147.1 123 56.9
Thhalv10018029m.g Eutrema salsugineum HOM05D005978 ORTHO05D007472 1.2e-33 147.1 123 60.2
Aa31LG4G6720 Aethionema arabicum HOM05D005978 ORTHO05D007472 1.5e-33 146.7 123 56.9
A07p42300 Brassica napus HOM05D005978 ORTHO05D007472 2.6e-33 146.0 123 57.7
BolC6t40113H Brassica oleracea HOM05D005978 ORTHO05D007472 2.6e-33 146.0 123 56.9
TPR.G21607 Trifolium pratense HOM05D005978 ORTHO05D007472 4.5e-33 145.2 123 56.9
Os10g0548200 Oryza sativa ssp. japonica HOM05D005978 ORTHO05D007472 5.8e-33 144.8 124 58.1
Sed0020914 Sechium edule HOM05D005978 ORTHO05D007472 5.8e-33 144.8 119 60.5
Phvul.002G054600 Phaseolus vulgaris HOM05D005978 ORTHO05D007472 1.0e-32 144.1 123 55.3
CAN.G1330.32 Capsicum annuum HOM05D005978 ORTHO05D007472 1.3e-32 143.7 121 62.8
Migut.M00377 Erythranthe guttata HOM05D005978 ORTHO05D007472 1.3e-32 143.7 121 62.8
Peaxi162Scf00385g01220 Petunia axillaris HOM05D005978 ORTHO05D007472 1.3e-32 143.7 123 60.2
HPP92_007456 Vanilla planifolia HOM05D005978 ORTHO05D007472 1.3e-32 143.7 125 57.6
CANSAT64G0954 Cannabis sativa HOM05D005978 ORTHO05D007472 1.7e-32 143.3 127 58.3
CARHR070190 Cardamine hirsuta HOM05D005978 ORTHO05D007472 1.7e-32 143.3 121 57.9
Glyma.01G245200 Glycine max HOM05D005978 ORTHO05D007472 1.7e-32 143.3 123 56.9
BcaC08g47227 Brassica carinata HOM05D005978 ORTHO05D007472 2.2e-32 142.9 123 57.7
Lalb_Chr16g0376221 Lupinus albus HOM05D005978 ORTHO05D007472 2.9e-32 142.5 123 56.9
Psat4g213520 Pisum sativum HOM05D005978 ORTHO05D007472 6.5e-32 141.4 123 56.1
Lj1g0010496 Lotus japonicus HOM05D005978 ORTHO05D007472 1.4e-31 140.2 121 55.4
SGA_v2.0_scaffold34G13893 Striga asiatica HOM05D005978 ORTHO05D007472 1.4e-31 140.2 121 62.8
MELO3C017073.2 Cucumis melo HOM05D005978 ORTHO05D007472 2.5e-31 139.4 120 60.8
Medtr5g004660 Medicago truncatula HOM05D005978 ORTHO05D007472 2.5e-31 139.4 123 56.9
Sc26g0004780 Simmondsia chinensis HOM05D005978 ORTHO05D007472 3.2e-31 139.0 124 58.1
CsaV3_4G037800 Cucumis sativus L. HOM05D005978 ORTHO05D007472 7.1e-31 137.9 120 59.2
PGR031G1913 Punica granatum HOM05D005978 ORTHO05D007472 2.7e-30 136.0 121 57.0
SEGI_31935 Sequoiadendron giganteum HOM05D005978 ORTHO05D007472 7.9e-30 134.4 123 56.1
Lsat_1_v5_gn_9_48081 Lactuca sativa HOM05D005978 ORTHO05D007472 1.0e-29 134.0 120 56.7
SalBow7G3859 Salvia bowleyana HOM05D005978 ORTHO05D007472 1.3e-29 133.7 121 61.2
Hund05194 Selenicereus undatus HOM05D005978 ORTHO05D007472 1.3e-29 133.7 124 55.6
AUR62042533 Chenopodium quinoa HOM05D005978 ORTHO05D007472 1.8e-29 133.3 121 57.9
HanXRQChr16g0512201 Helianthus annuus HOM05D005978 ORTHO05D007472 3.0e-29 132.5 121 59.5
EL10Ac1g01856 Beta vulgaris HOM05D005978 ORTHO05D007472 3.9e-29 132.1 123 56.9
Aqoxy1G03258 Aquilegia oxysepala HOM05D005978 ORTHO05D007472 1.5e-28 130.2 121 57.0
ECA232G2674 Erigeron canadensis HOM05D005978 ORTHO05D007472 1.9e-28 129.8 120 55.0
arahy.Tifrunner.gnm1.ann1.BP04P6 Arachis hypogaea HOM05D005978 ORTHO05D007472 5.7e-28 128.3 123 51.2
arahy.Tifrunner.gnm1.ann1.U7IYJM Arachis hypogaea HOM05D005978 ORTHO05D007472 5.7e-28 128.3 123 51.2
AUR62035192 Chenopodium quinoa HOM05D005978 ORTHO05D007472 5.7e-28 128.3 114 57.9
Ah.11g042540 Amaranthus hybridus HOM05D005978 ORTHO05D007472 1.2e-22 110.5 119 46.2
Haze_22888 Corylus avellana HOM05D005978 ORTHO05D007472 6.3e-19 98.2 66 71.2
TAR628G1490 Trochodendron aralioides HOM05D005978 ORTHO05D007472 1.1e-15 87.4 57 73.7
Solyc04g082980.2 Solanum lycopersicum HOM05D005978 ORTHO05D007472 1.2e-14 84.0 62 71.0
ATR0605G322 Amborella trichopoda HOM05D005978 ORTHO05D007472 2.3e-13 79.7 63 65.1
FAN08G2840 Fragaria x ananassa HOM05D005978 ORTHO05D007472 3.1e-10 69.3 53 69.8
Solyc04g082990.3 Solanum lycopersicum HOM05D005978 ORTHO05D004271 9.1e-10 67.8 58 56.9
unitig_899.g15248 Utricularia gibba HOM05D005978 ORTHO05D007472 1.5e-09 67.0 51 66.7
Mapoly0002s0268 Marchantia polymorpha HOM05D005978 ORTHO05D007472 3.4e-09 65.9 112 37.5


User provided reference genes

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