Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043011 Camellia sinensis var. sinensis HOM05D001672 ORTHO05D008029 6.2e-32 140.2 72 100.0
PGR031G1216 Punica granatum HOM05D001672 ORTHO05D008029 2.5e-25 118.2 69 82.6
Phvul.008G052200 Phaseolus vulgaris HOM05D001672 ORTHO05D008029 4.3e-25 117.5 69 84.1
vmacro10415 Vaccinium macrocarpon HOM05D001672 ORTHO05D008029 4.3e-25 117.5 69 82.6
VMungo1383G0488 Vigna mungo HOM05D001672 ORTHO05D008029 5.7e-25 117.1 69 84.1
Rhsim09G0128900 Rhododendron simsii HOM05D001672 ORTHO05D008029 1.3e-24 115.9 69 81.2
GSVIVG01019055001 Vitis vinifera HOM05D001672 ORTHO05D008029 1.6e-24 115.5 69 82.6
Glyma.09G248300 Glycine max HOM05D001672 ORTHO05D008029 2.1e-24 115.2 69 81.2
Actinidia31345 Actinidia chinensis HOM05D001672 ORTHO05D008029 2.8e-24 114.8 69 82.6
Duzib106G1257 Durio zibethinus HOM05D001672 ORTHO05D008029 2.8e-24 114.8 69 79.7
Ca_08007_v3 Cicer arietinum L. HOM05D001672 ORTHO05D008029 3.7e-24 114.4 69 82.6
Gohir.D08G247600 Gossypium hirsutum HOM05D001672 ORTHO05D008029 3.7e-24 114.4 69 81.2
Gorai.004G264100 Gossypium raimondii HOM05D001672 ORTHO05D008029 3.7e-24 114.4 69 81.2
FvH4_6g00190 Fragaria vesca HOM05D001672 ORTHO05D008029 4.8e-24 114.0 69 81.2
FAN09G4699 Fragaria x ananassa HOM05D000399 ORTHO05D000304 4.8e-24 114.0 69 81.2
DCAR_030007 Daucus carota HOM05D001672 ORTHO05D008029 6.2e-24 113.6 69 81.2
Hma1.2p1_0831F.1_g225370 Hydrangea macrophylla HOM05D001672 ORTHO05D008029 6.2e-24 113.6 69 82.6
Prupe.6G363800 Prunus persica HOM05D001672 ORTHO05D008029 6.2e-24 113.6 69 79.7
Thecc.05G187200 Theobroma cacao HOM05D001672 ORTHO05D008029 6.2e-24 113.6 69 81.2
TPR.G32008 Trifolium pratense HOM05D001672 ORTHO05D008029 6.2e-24 113.6 69 82.6
Cpa.g.sc123.43 Carica papaya HOM05D001672 ORTHO05D008029 8.2e-24 113.2 69 79.7
Cfa006240 Carpinus fangiana HOM05D001672 ORTHO05D008029 1.1e-23 112.8 69 81.2
Haze_04593 Corylus avellana HOM05D000399 ORTHO05D008029 1.1e-23 112.8 69 81.2
arahy.Tifrunner.gnm1.ann1.322B5E Arachis hypogaea HOM05D001672 ORTHO05D008029 1.4e-23 112.5 69 81.2
arahy.Tifrunner.gnm1.ann1.5A5R3G Arachis hypogaea HOM05D001672 ORTHO05D008029 1.4e-23 112.5 69 81.2
RcHm_v2.0_Chr3g0447561 Rosa chinensis HOM05D001672 ORTHO05D008029 1.8e-23 112.1 69 78.3
AL7G45120 Arabidopsis lyrata HOM05D001672 ORTHO05D008029 2.4e-23 111.7 68 79.4
Carub.0007s3185 Capsella rubella HOM05D001672 ORTHO05D008029 2.4e-23 111.7 68 79.4
FAN14G4355 Fragaria x ananassa HOM05D001672 ORTHO05D008029 2.4e-23 111.7 69 79.7
Gohir.A08G227200 Gossypium hirsutum HOM05D001672 ORTHO05D008029 2.4e-23 111.7 69 79.7
Hma1.2p1_0831F.1_g225380 Hydrangea macrophylla HOM05D001672 ORTHO05D008029 2.4e-23 111.7 68 82.4
Lj1g0017266 Lotus japonicus HOM05D001672 ORTHO05D008029 2.4e-23 111.7 70 82.9
MD04G1247400 Malus domestica HOM05D001672 ORTHO05D008029 2.4e-23 111.7 69 76.8
Medtr7g080430 Medicago truncatula HOM05D001672 ORTHO05D008029 2.4e-23 111.7 69 79.7
Psat3g102320 Pisum sativum HOM05D001672 ORTHO05D008029 2.4e-23 111.7 69 81.2
Dinv21370 Davidia involucrata HOM05D001672 ORTHO05D008029 3.1e-23 111.3 69 79.7
Aa31LG9G17900 Aethionema arabicum HOM05D001672 ORTHO05D008029 4.0e-23 110.9 68 80.9
Lj3A233G8 Lonicera japonica HOM05D001672 ORTHO05D008029 4.0e-23 110.9 70 78.6
TAR362G1091 Trochodendron aralioides HOM05D001672 ORTHO05D008029 4.0e-23 110.9 69 81.2
AT5G36170 Arabidopsis thaliana HOM05D001672 ORTHO05D008029 5.3e-23 110.5 68 77.9
CAN.G4.22 Capsicum annuum HOM05D001672 ORTHO05D008029 5.3e-23 110.5 69 78.3
MD12G1263000 Malus domestica HOM05D001672 ORTHO05D008029 5.3e-23 110.5 69 75.4
QL01p048021 Quercus lobata HOM05D001672 ORTHO05D008029 5.3e-23 110.5 70 77.1
SGA_v2.0_scaffold122G33194 Striga asiatica HOM05D001672 ORTHO05D008029 5.3e-23 110.5 69 76.8
TWI36G0167 Tripterygium wilfordii HOM05D001672 ORTHO05D008029 5.3e-23 110.5 69 78.3
TWI36G0981 Tripterygium wilfordii HOM05D001672 ORTHO05D008029 5.3e-23 110.5 69 78.3
EL10Ac4g10010 Beta vulgaris HOM05D001672 ORTHO05D008029 6.9e-23 110.2 69 78.3
Thhalv10004205m.g Eutrema salsugineum HOM05D001672 ORTHO05D008029 6.9e-23 110.2 68 77.9
Nn7g37576 Nelumbo nucifera HOM05D001672 ORTHO05D008029 6.9e-23 110.2 69 76.8
THA.LOC104805706 Tarenaya hassleriana HOM05D001672 ORTHO05D008029 6.9e-23 110.2 69 79.7
Lalb_Chr19g0127621 Lupinus albus HOM05D001672 ORTHO05D008029 9.0e-23 109.8 69 82.6
Potri.008G075800 Populus trichocarpa HOM05D001672 ORTHO05D008029 9.0e-23 109.8 69 76.8
Cc09_g03960 Coffea canephora HOM05D001672 ORTHO05D008029 1.2e-22 109.4 69 78.3
CANSAT54G0429 Cannabis sativa HOM05D001672 ORTHO05D008029 1.5e-22 109.0 69 78.3
CiPaw.07G082900 Carya illinoinensis HOM05D001672 ORTHO05D008029 1.5e-22 109.0 69 78.3
Duzib177G0269 Durio zibethinus HOM05D001672 ORTHO05D008029 1.5e-22 109.0 69 78.3
FAN02G0822 Fragaria x ananassa HOM05D001672 ORTHO05D008029 1.5e-22 109.0 69 78.3
Oeu010169.1 Olea europaea HOM05D001672 ORTHO05D008029 1.5e-22 109.0 69 76.8
Sabra08G0056400 Salix brachista HOM05D001672 ORTHO05D008029 1.5e-22 109.0 69 76.8
Hund21839 Selenicereus undatus HOM05D001672 ORTHO05D008029 1.5e-22 109.0 69 76.8
Lsat_1_v5_gn_8_2240 Lactuca sativa HOM05D001672 ORTHO05D008029 2.0e-22 108.6 69 79.7
Nitab4.5_0001449g0040 Nicotiana tabacum HOM05D001672 ORTHO05D008029 2.0e-22 108.6 69 75.4
Nitab4.5_0024954g0010 Nicotiana tabacum HOM05D001672 ORTHO05D008029 2.0e-22 108.6 69 75.4
Solyc04g025290.4 Solanum lycopersicum HOM05D001672 ORTHO05D008029 2.0e-22 108.6 69 75.4
Sopen04g011940 Solanum pennellii HOM05D001672 ORTHO05D008029 2.0e-22 108.6 69 75.4
Aqoxy2G04124 Aquilegia oxysepala HOM05D001672 ORTHO05D008029 2.6e-22 108.2 70 78.6
CDE07G1999 Ceratophyllum demersum HOM05D001672 ORTHO05D008029 4.5e-22 107.5 69 76.8
Duzib150G1308 Durio zibethinus HOM05D001672 ORTHO05D008029 4.5e-22 107.5 69 76.8
HanXRQChr05g0157031 Helianthus annuus HOM05D001672 ORTHO05D008029 4.5e-22 107.5 68 79.4
Manes.12G003100 Manihot esculenta HOM05D001672 ORTHO05D008029 4.5e-22 107.5 70 75.7
Ah.04g159150 Amaranthus hybridus HOM05D000399 ORTHO05D000304 5.8e-22 107.1 69 73.9
BcaB02g08040 Brassica carinata HOM05D001672 ORTHO05D008029 5.8e-22 107.1 68 76.5
A05p16360 Brassica napus HOM05D001672 ORTHO05D008029 5.8e-22 107.1 68 76.5
BraA05t20544Z Brassica rapa HOM05D001672 ORTHO05D008029 5.8e-22 107.1 68 76.5
Ciclev10012132m.g Citrus clementina HOM05D001672 ORTHO05D008029 5.8e-22 107.1 69 76.8
MELO3C010022.2 Cucumis melo HOM05D001672 ORTHO05D008029 5.8e-22 107.1 70 74.3
ECA233G5271 Erigeron canadensis HOM05D001672 ORTHO05D008029 5.8e-22 107.1 69 78.3
Sp7g05990 Schrenkiella parvula HOM05D001672 ORTHO05D008029 5.8e-22 107.1 68 76.5
CsaV3_1G044280 Cucumis sativus L. HOM05D001672 ORTHO05D008029 7.6e-22 106.7 69 75.4
Os07g0546600 Oryza sativa ssp. japonica HOM05D001672 ORTHO05D008029 7.6e-22 106.7 70 72.9
Peaxi162Scf00619g00046 Petunia axillaris HOM05D001672 ORTHO05D008029 7.6e-22 106.7 69 75.4
AUR62000284 Chenopodium quinoa HOM05D001672 ORTHO05D008029 1.0e-21 106.3 69 75.4
AUR62006632 Chenopodium quinoa HOM05D001672 ORTHO05D008029 1.0e-21 106.3 69 75.4
ATR0743G112 Amborella trichopoda HOM05D001672 ORTHO05D008029 1.3e-21 105.9 67 76.1
PSO210G6757 Papaver somniferum HOM05D001672 ORTHO05D008029 1.3e-21 105.9 69 78.3
PSO832G2456 Papaver somniferum HOM05D001672 ORTHO05D008029 1.3e-21 105.9 69 78.3
BcaC08g44326 Brassica carinata HOM05D001672 ORTHO05D008029 1.7e-21 105.5 68 76.5
C06p17510 Brassica napus HOM05D001672 ORTHO05D008029 1.7e-21 105.5 68 76.5
BolC6t36945H Brassica oleracea HOM05D001672 ORTHO05D008029 1.7e-21 105.5 68 76.5
Eucgr.B01462 Eucalyptus grandis HOM05D001672 ORTHO05D008029 1.7e-21 105.5 69 73.9
Zm00001eb323570 Zea mays HOM05D001672 ORTHO05D008029 1.7e-21 105.5 70 72.9
MSTRG.8200 Avicennia marina HOM05D001672 ORTHO05D008029 2.2e-21 105.1 69 75.4
HPP92_003581 Vanilla planifolia HOM05D001672 ORTHO05D008029 2.2e-21 105.1 69 71.0
Atru.chr12.1702 Acer truncatum HOM05D001672 ORTHO05D008029 2.9e-21 104.8 69 75.4
Sed0013113 Sechium edule HOM05D001672 ORTHO05D008029 8.4e-21 103.2 69 73.9
SalBow6G6011 Salvia bowleyana HOM05D001672 ORTHO05D008029 1.4e-20 102.4 69 75.4
Sc16g0010530 Simmondsia chinensis HOM05D001672 ORTHO05D008029 5.5e-20 100.5 69 71.0
SEGI_18756 Sequoiadendron giganteum HOM05D001672 ORTHO05D008029 1.9e-17 92.0 69 62.3
HanXRQChr17g0541541 Helianthus annuus HOM05D001672 ORTHO05D008029 1.1e-15 86.3 55 78.2
CBR_g54104 Chara braunii HOM05D001672 ORTHO05D008029 1.8e-15 85.5 70 62.9
AagrBONN_evm.TU.Sc2ySwM_368.638 Anthoceros agrestis HOM05D001672 ORTHO05D008029 1.5e-14 82.4 69 56.5
SMO356G0043 Selaginella moellendorffii HOM05D001672 ORTHO05D008029 2.0e-14 82.0 69 62.3
Pp3c3_11640 Physcomitrium patens HOM05D001672 ORTHO05D008029 1.7e-13 79.0 69 53.6
ECA236G2262 Erigeron canadensis HOM05D001672 ORTHO05D008029 1.9e-12 75.5 64 64.1
Mapoly0009s0190 Marchantia polymorpha HOM05D001672 ORTHO05D008029 4.2e-12 74.3 69 53.6
SEGI_04522 Sequoiadendron giganteum HOM05D001672 ORTHO05D008153 3.6e-11 71.2 69 53.6
Aqoxy289s001 Aquilegia oxysepala HOM05D004538 ORTHO05D008153 3.7e-08 61.2 63 47.6
Aqoxy2G00268 Aquilegia oxysepala HOM05D001672 ORTHO05D008153 3.7e-08 61.2 63 47.6
Manes.09G016400 Manihot esculenta HOM05D001672 ORTHO05D008153 4.8e-08 60.8 69 43.5
ATR0721G134 Amborella trichopoda HOM05D001672 ORTHO05D008153 2.4e-07 58.5 65 44.6
HPP92_001435 Vanilla planifolia HOM05D001672 ORTHO05D008153 2.4e-07 58.5 63 49.2
PSO339G3968 Papaver somniferum HOM05D001672 ORTHO05D008153 4.1e-07 57.8 67 41.8
PSO384G4779 Papaver somniferum HOM05D001672 ORTHO05D008153 4.1e-07 57.8 67 41.8
Manes.09G016710 Manihot esculenta HOM05D001672 ORTHO05D008153 5.3e-07 57.4 69 40.6
HPP92_001437 Vanilla planifolia HOM05D001672 ORTHO05D008153 5.3e-07 57.4 67 44.8
Cpa.g.sc120.14 Carica papaya HOM05D001672 ORTHO05D008153 6.9e-07 57.0 66 42.4
CDE08G1323 Ceratophyllum demersum HOM05D001672 ORTHO05D008153 9.1e-07 56.6 65 40.0
COL.COLO4_21292 Corchorus olitorius HOM05D001672 ORTHO05D008153 9.1e-07 56.6 67 41.8
PRCOL_00004465 Prasinoderma coloniale HOM05D001672 ORTHO05D008029 9.1e-07 56.6 67 40.3
PGR142G0049 Punica granatum HOM05D001672 ORTHO05D008153 9.1e-07 56.6 63 46.0
Zm00001eb286770 Zea mays HOM05D001672 ORTHO05D008153 9.1e-07 56.6 67 41.8
TAR636G0319 Trochodendron aralioides HOM05D001672 ORTHO05D008153 1.2e-06 56.2 63 46.0
Thecc.05G144700 Theobroma cacao HOM05D001672 ORTHO05D008153 1.5e-06 55.8 67 41.8
CSS0031282 Camellia sinensis var. sinensis HOM05D001672 ORTHO05D008153 2.0e-06 55.5 63 44.4
Potri.006G045200 Populus trichocarpa HOM05D001672 ORTHO05D008153 2.0e-06 55.5 63 44.4
Nn2g15055 Nelumbo nucifera HOM05D001672 ORTHO05D008153 3.4e-06 54.7 63 44.4
Sabra06G0031100 Salix brachista HOM05D001260 ORTHO05D002424 3.4e-06 54.7 63 44.4
Cfa016750 Carpinus fangiana HOM05D001672 ORTHO05D008153 5.9e-06 53.9 64 45.3
Lj1A1122G39 Lonicera japonica HOM05D001672 ORTHO05D008153 5.9e-06 53.9 63 44.4
A09p50130 Brassica napus HOM05D001672 ORTHO05D008153 7.7e-06 53.5 67 40.3
BraA09t40464Z Brassica rapa HOM05D001672 ORTHO05D008153 7.7e-06 53.5 67 40.3
Haze_19753 Corylus avellana HOM05D001260 ORTHO05D002424 7.7e-06 53.5 64 43.8
MBI19_g08305_MAGBIO Magnolia biondii HOM05D001672 ORTHO05D008153 7.7e-06 53.5 63 44.4


User provided reference genes

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