Gene: Pp3c3_11640
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c3_11640
- Transcript Identifier Pp3c3_11640V3.2
- Gene Type Coding gene
- Location Chr03 : 8151559-8153007 : positive
Gene Family Information
- ID HOM05D001672
- #Genes/#Species 386/99
- Phylogenetic origin
- ID ORTHO05D008029
- #Genes/#Species 124/93
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c3_11640V3.2
- pacid 32944872
- alias Phpat.003G044300
- uniprot A0A2K1KU49
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009657 | ISO | PLAZA Integrative Orthology | plastid organization | AT5G36170 |
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT3G57190 |
| GO:0043488 | ISO | PLAZA Integrative Orthology | regulation of mRNA stability | AT3G57190 |
| GO:0006396 | ISO | PLAZA Integrative Orthology | RNA processing | AT5G36170 |
| GO:0006415 | IEA | GOA Database | translational termination | |
| GO:0006415 | IEA | InterPro | translational termination | |
| GO:0006412 | IEA | GOA Database | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003730 | ISO | PLAZA Integrative Orthology | mRNA 3'-UTR binding | AT3G57190 |
| GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | AT3G57190 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G57190 |
| GO:0016149 | IEA | GOA Database | translation release factor activity, codon specific | |
| GO:0016149 | IEA | InterPro | translation release factor activity, codon specific | |
| GO:0003747 | IEA | GOA Database | translation release factor activity | |
| GO:0003747 | IEA | InterPro | translation release factor activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT5G36170 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G36170 |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005737 | IEA | InterPro | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.7.5.2 | Protein biosynthesis.organelle machinery.translation termination.peptide chain release factor (PrfB) |