Gene: AT5G36170

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G36170
  • Transcript Identifier AT5G36170.1
  • Gene Type Coding gene
  • Location Chr5 : 14236083-14237974 : negative

Gene Family Information

  • ID HOM05D001672
  • #Genes/#Species 386/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G36170.1
  • symbol HCF109
  • Alias ATPRFB
  • uniprot Q9LVY0

Descriptions

  • Description high chlorophyll fluorescent 109
  • Computational description high chlorophyll fluorescent 109 (HCF109); FUNCTIONS IN: translation release factor activity, codon specific, translation release factor activity; INVOLVED IN: translational termination, plastid organization, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352), Peptide chain release factor 2 (InterPro:IPR004374), Peptide chain release factor (InterPro:IPR005139); BEST Arabidopsis thaliana protein match is: Peptide chain release factor 2 (TAIR:AT1G56350.1); Has 17252 Blast hits to 17250 proteins in 2824 species: Archae - 5; Bacteria - 10710; Metazoa - 293; Fungi - 251; Plants - 224; Viruses - 14; Other Eukaryotes - 5755 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006415
IMP
IEA
Gene Ontologytranslational termination1
GO:0006415
IEA
InterProtranslational termination
GO:0006412
IEA
GOA Databasetranslation
GO:0009657
IMP
Gene Ontologyplastid organization2
GO:0006396
IMP
Gene OntologyRNA processing2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003747
IEA
Gene Ontologytranslation release factor activity
GO:0003747
IEA
InterProtranslation release factor activity
GO:0016149
IEA
Gene Ontologytranslation release factor activity, codon specific
GO:0016149
IEA
InterProtranslation release factor activity, codon specific

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
IDA
IEA
GOA Databasechloroplast stroma
GO:0009570
HDA
Gene Ontologychloroplast stroma3
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA
ISM
Gene Ontologychloroplast1
GO:0009536
IEA
GOA Databaseplastid

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005139 Peptide chain release factor
IPR004374 Peptide chain release factor 2
IPR000352 Peptide chain release factor class I
Mapman id Description
17.7.5.2 Protein biosynthesis.organelle machinery.translation termination.peptide chain release factor (PrfB)