Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042637 Camellia sinensis var. sinensis HOM05D005740 ORTHO05D007085 8.8e-163 577.0 317 100.0
CSS0030523 Camellia sinensis var. sinensis HOM05D005740 ORTHO05D007085 1.6e-159 566.2 317 98.7
Cpa.g.sc3.153 Carica papaya HOM05D005740 ORTHO05D007085 1.3e-105 387.1 257 77.8
Nn3g18795 Nelumbo nucifera HOM05D005740 ORTHO05D007085 1.0e-102 377.5 337 61.1
Actinidia34269 Actinidia chinensis HOM05D005740 ORTHO05D007085 3.0e-102 375.9 317 65.6
GSVIVG01038643001 Vitis vinifera HOM05D005740 ORTHO05D007085 3.9e-102 375.6 234 79.9
Manes.05G197600 Manihot esculenta HOM05D005740 ORTHO05D007085 8.6e-102 374.4 249 75.1
TAR375G0796 Trochodendron aralioides HOM05D005740 ORTHO05D007085 1.9e-101 373.2 322 65.2
MSTRG.26978 Avicennia marina HOM05D005740 ORTHO05D007085 3.3e-101 372.5 307 64.2
Potri.012G005800 Populus trichocarpa HOM05D005740 ORTHO05D007085 1.2e-100 370.5 236 78.0
Actinidia28282 Actinidia chinensis HOM05D005740 ORTHO05D007085 1.6e-100 370.2 256 75.8
PGR042G0341 Punica granatum HOM05D005740 ORTHO05D007085 3.6e-100 369.0 244 75.0
CiPaw.05G205100 Carya illinoinensis HOM05D005740 ORTHO05D007085 4.7e-100 368.6 238 77.3
ClCG02G000010 Citrullus lanatus HOM05D005740 ORTHO05D007085 4.7e-100 368.6 241 76.8
Thecc.03G208700 Theobroma cacao HOM05D005740 ORTHO05D007085 4.7e-100 368.6 321 66.0
CsaV3_2G019690 Cucumis sativus L. HOM05D005740 ORTHO05D007085 1.1e-99 367.5 321 62.3
Ciclev10021260m.g Citrus clementina HOM05D005740 ORTHO05D007085 1.4e-99 367.1 231 78.8
SalBow6G1442 Salvia bowleyana HOM05D005740 ORTHO05D007085 2.4e-99 366.3 319 62.1
Sopen06g029440 Solanum pennellii HOM05D005740 ORTHO05D007085 2.4e-99 366.3 322 63.7
Haze_00297 Corylus avellana HOM05D005740 ORTHO05D007085 4.0e-99 365.5 237 77.6
Duzib205G0029 Durio zibethinus HOM05D005740 ORTHO05D007085 4.0e-99 365.5 311 65.0
Gohir.D08G116100 Gossypium hirsutum HOM05D005740 ORTHO05D007085 6.9e-99 364.8 324 62.3
MD07G1298900 Malus domestica HOM05D005740 ORTHO05D007085 6.9e-99 364.8 256 72.7
QL09p007195 Quercus lobata HOM05D005740 ORTHO05D007085 8.9e-99 364.4 249 75.9
vmacro06441 Vaccinium macrocarpon HOM05D005740 ORTHO05D007085 8.9e-99 364.4 318 64.2
vmacro22782 Vaccinium macrocarpon HOM05D005740 ORTHO05D007085 1.5e-98 363.6 320 65.9
COL.COLO4_14370 Corchorus olitorius HOM05D005740 ORTHO05D007085 4.4e-98 362.1 245 73.1
Solyc06g073090.3 Solanum lycopersicum HOM05D005740 ORTHO05D007085 7.6e-98 361.3 321 63.6
Potri.015G002200 Populus trichocarpa HOM05D005740 ORTHO05D007085 1.3e-97 360.5 237 75.9
PGSC0003DMG400027021 Solanum tuberosum HOM05D005740 ORTHO05D007085 1.7e-97 360.1 322 62.7
Cfa016160 Carpinus fangiana HOM05D005740 ORTHO05D007085 2.9e-97 359.4 237 76.8
Gorai.004G125000 Gossypium raimondii HOM05D005740 ORTHO05D007085 3.8e-97 359.0 314 62.7
Sed0000166 Sechium edule HOM05D005740 ORTHO05D007085 1.1e-96 357.5 317 62.8
THA.LOC104798985 Tarenaya hassleriana HOM05D005740 ORTHO05D007085 1.1e-96 357.5 248 73.0
Glyma.06G136500 Glycine max HOM05D005740 ORTHO05D007085 1.4e-96 357.1 245 73.9
Rhsim03G0215400 Rhododendron simsii HOM05D005740 ORTHO05D007085 4.2e-96 355.5 318 64.2
MBI12_g14495_MAGBIO Magnolia biondii HOM05D005740 ORTHO05D007085 5.4e-96 355.1 241 75.5
Prupe.2G318800 Prunus persica HOM05D005740 ORTHO05D007085 5.4e-96 355.1 319 62.4
Eucgr.A01406 Eucalyptus grandis HOM05D005740 ORTHO05D007085 7.1e-96 354.8 325 61.8
Phvul.009G045100 Phaseolus vulgaris HOM05D005740 ORTHO05D007085 9.3e-96 354.4 245 72.2
SGA_v2.0_scaffold18G08464 Striga asiatica HOM05D005740 ORTHO05D007085 9.3e-96 354.4 315 64.4
DCAR_020372 Daucus carota HOM05D005740 ORTHO05D007085 2.1e-95 353.2 236 75.0
arahy.Tifrunner.gnm1.ann1.2GB72X Arachis hypogaea HOM05D005740 ORTHO05D007085 2.7e-95 352.8 245 72.7
arahy.Tifrunner.gnm1.ann1.88XX4I Arachis hypogaea HOM05D005740 ORTHO05D007085 6.0e-95 351.7 245 72.2
ATR1155G047 Amborella trichopoda HOM05D005740 ORTHO05D007085 1.7e-94 350.1 249 69.5
VMungo1309G0132 Vigna mungo HOM05D005740 ORTHO05D007085 1.7e-94 350.1 245 72.7
Lsat_1_v5_gn_9_50040 Lactuca sativa HOM05D005740 ORTHO05D007085 2.3e-94 349.7 316 61.7
Sabra15G0001400 Salix brachista HOM05D005740 ORTHO05D007085 3.0e-94 349.4 234 73.9
Glyma.04G228400 Glycine max HOM05D005740 ORTHO05D007085 3.9e-94 349.0 235 75.7
Nitab4.5_0002895g0020 Nicotiana tabacum HOM05D005740 ORTHO05D007085 3.9e-94 349.0 326 60.7
AUR62035622 Chenopodium quinoa HOM05D005740 ORTHO05D007085 5.1e-94 348.6 255 69.4
HanXRQChr04g0105951 Helianthus annuus HOM05D005740 ORTHO05D007085 5.1e-94 348.6 254 70.5
Nitab4.5_0000115g0060 Nicotiana tabacum HOM05D005740 ORTHO05D007085 1.9e-93 346.7 243 72.0
TWI23G0506 Tripterygium wilfordii HOM05D005740 ORTHO05D007085 3.3e-93 345.9 319 60.2
EL10Ac3g05180 Beta vulgaris HOM05D005740 ORTHO05D007085 4.3e-93 345.5 239 73.6
CARHR188930 Cardamine hirsuta HOM05D005740 ORTHO05D007085 2.8e-92 342.8 240 71.7
Ah.07g204700 Amaranthus hybridus HOM05D005740 ORTHO05D007085 6.2e-92 341.7 247 70.9
CANSAT21G1962 Cannabis sativa HOM05D005740 ORTHO05D007085 1.1e-91 340.9 238 76.9
ECA232G2160 Erigeron canadensis HOM05D005740 ORTHO05D007085 1.4e-91 340.5 229 73.8
RcHm_v2.0_Chr1g0382861 Rosa chinensis HOM05D005740 ORTHO05D007085 1.4e-91 340.5 242 72.7
Gohir.A08G104500 Gossypium hirsutum HOM05D005740 ORTHO05D007085 1.8e-91 340.1 255 71.0
CDE05G3242 Ceratophyllum demersum HOM05D005740 ORTHO05D007085 6.9e-91 338.2 313 59.7
Thhalv10004495m.g Eutrema salsugineum HOM05D005740 ORTHO05D007085 9.0e-91 337.8 313 59.4
Sp2g22850 Schrenkiella parvula HOM05D005740 ORTHO05D007085 9.0e-91 337.8 314 59.6
Aa31LG11G3730 Aethionema arabicum HOM05D005740 ORTHO05D007085 2.0e-90 336.7 311 60.5
Ca_16779_v3 Cicer arietinum L. HOM05D005740 ORTHO05D007085 3.4e-90 335.9 239 72.0
Aqoxy7G02158 Aquilegia oxysepala HOM05D005740 ORTHO05D007085 4.5e-90 335.5 319 60.2
FAN03G0834 Fragaria x ananassa HOM05D005740 ORTHO05D007085 4.5e-90 335.5 232 72.0
FAN10G2230 Fragaria x ananassa HOM05D005740 ORTHO05D007085 4.5e-90 335.5 242 70.2
FAN01G0684 Fragaria x ananassa HOM05D005740 ORTHO05D007085 5.8e-90 335.1 242 70.2
Lalb_Chr08g0239611 Lupinus albus HOM05D005740 ORTHO05D007085 7.6e-90 334.7 229 74.2
A09p06460 Brassica napus HOM05D005740 ORTHO05D007085 9.9e-90 334.3 246 68.7
Lj1g0025829 Lotus japonicus HOM05D005740 ORTHO05D007085 1.3e-89 334.0 237 71.3
AL6G36080 Arabidopsis lyrata HOM05D005740 ORTHO05D007085 2.2e-89 333.2 312 59.6
C09p07180 Brassica napus HOM05D005740 ORTHO05D007085 2.2e-89 333.2 247 68.4
Psat5g072000 Pisum sativum HOM05D005740 ORTHO05D007085 2.2e-89 333.2 244 68.0
BraA09t36289Z Brassica rapa HOM05D005740 ORTHO05D007085 2.9e-89 332.8 311 58.8
BcaC04g23547 Brassica carinata HOM05D005740 ORTHO05D007085 4.9e-89 332.0 247 68.0
Medtr3g092720 Medicago truncatula HOM05D005740 ORTHO05D007085 6.4e-89 331.6 238 69.7
PSO782G4352 Papaver somniferum HOM05D005740 ORTHO05D007085 6.4e-89 331.6 307 59.0
Migut.F00988 Erythranthe guttata HOM05D005740 ORTHO05D007085 8.4e-89 331.3 273 63.4
FvH4_7g32900 Fragaria vesca HOM05D005740 ORTHO05D007085 1.1e-88 330.9 242 70.7
CDE02G4511 Ceratophyllum demersum HOM05D005740 ORTHO05D007085 2.4e-88 329.7 310 58.1
Carub.0006s2231 Capsella rubella HOM05D005740 ORTHO05D007085 5.4e-88 328.6 309 59.5
AT5G24490 Arabidopsis thaliana HOM05D005740 ORTHO05D007085 9.3e-88 327.8 314 59.2
PSO063G0961 Papaver somniferum HOM05D005740 ORTHO05D007085 1.6e-87 327.0 307 58.6
Peaxi162Scf00618g00020 Petunia axillaris HOM05D005740 ORTHO05D007085 1.6e-87 327.0 239 70.7
BcaB04g19814 Brassica carinata HOM05D005740 ORTHO05D007085 2.7e-87 326.2 237 69.6
Sc13g0010280 Simmondsia chinensis HOM05D005740 ORTHO05D007085 2.7e-87 326.2 242 68.6
BcaNung01238 Brassica carinata HOM05D005740 ORTHO05D007085 4.6e-87 325.5 299 59.2
Migut.F00153 Erythranthe guttata HOM05D005740 ORTHO05D007085 2.3e-86 323.2 309 57.0
unitig_748.g7278 Utricularia gibba HOM05D005740 ORTHO05D007085 1.1e-85 320.9 313 56.2
MELO3C023190.2 Cucumis melo HOM05D005740 ORTHO05D007085 2.8e-84 316.2 218 72.5
Lj3A895G46 Lonicera japonica HOM05D005740 ORTHO05D007085 1.1e-83 314.3 259 68.0
HPP92_015050 Vanilla planifolia HOM05D005740 ORTHO05D007085 1.2e-82 310.8 244 63.1
AUR62006005 Chenopodium quinoa HOM05D005740 ORTHO05D007085 1.6e-79 300.4 220 68.6
Aqoxy7G02157 Aquilegia oxysepala HOM05D005740 ORTHO05D007085 5.6e-77 292.0 228 65.4
Hund09713 Selenicereus undatus HOM05D005740 ORTHO05D007085 3.1e-75 286.2 254 61.4
TPR.G33623 Trifolium pratense HOM05D005740 ORTHO05D007085 2.6e-74 283.1 215 67.9
BcaC09g52277 Brassica carinata HOM05D005740 ORTHO05D007085 1.3e-73 280.8 232 63.4
Actinidia08698 Actinidia chinensis HOM05D005740 ORTHO05D007085 6.5e-73 278.5 222 68.5
Dinv29211 Davidia involucrata HOM05D005740 ORTHO05D007085 5.5e-72 275.4 219 68.5
Os03g0856500 Oryza sativa ssp. japonica HOM05D005740 ORTHO05D007085 3.3e-69 266.2 249 55.8
Zm00001eb064950 Zea mays HOM05D005740 ORTHO05D007085 1.8e-67 260.4 241 55.6
C01p22870 Brassica napus HOM05D005740 ORTHO05D007085 5.0e-65 252.3 232 59.9
Atru.chr12.2428 Acer truncatum HOM05D005740 ORTHO05D007085 1.4e-64 250.8 191 68.1
C01p22900 Brassica napus HOM05D005740 ORTHO05D007085 1.4e-64 250.8 232 58.6
AagrBONN_evm.TU.Sc2ySwM_362.2025 Anthoceros agrestis HOM05D005740 ORTHO05D007085 4.2e-64 249.2 210 60.5
A06p35310 Brassica napus HOM05D005740 ORTHO05D007085 7.2e-64 248.4 203 63.5
BraA06t26457Z Brassica rapa HOM05D005740 ORTHO05D007085 7.2e-64 248.4 203 63.5
BcaC09g52279 Brassica carinata HOM05D005740 ORTHO05D007085 1.3e-62 244.2 206 62.1
Mapoly0136s0019 Marchantia polymorpha HOM05D005740 ORTHO05D007085 4.3e-61 239.2 211 55.0
Pp3c21_1350 Physcomitrium patens HOM05D005740 ORTHO05D007085 2.2e-60 236.9 213 54.9
CAN.G65.152 Capsicum annuum HOM05D005740 ORTHO05D007085 2.8e-60 236.5 151 75.5
Pp3c18_22260 Physcomitrium patens HOM05D005740 ORTHO05D007085 3.7e-60 236.1 213 54.9
CBR_g44535 Chara braunii HOM05D005740 ORTHO05D007085 1.1e-59 234.6 214 54.7
SMO145G0182 Selaginella moellendorffii HOM05D005740 ORTHO05D007085 1.0e-57 228.0 213 52.6
FAN10G1912 Fragaria x ananassa HOM05D005740 ORTHO05D007085 1.0e-54 218.0 167 65.9
C01p22930 Brassica napus HOM05D005740 ORTHO05D007085 1.8e-54 217.2 208 57.7
BcaC09g49688 Brassica carinata HOM05D005740 ORTHO05D007085 8.2e-52 208.4 311 44.7
Potri.012G026375 Populus trichocarpa HOM05D005740 ORTHO05D007085 1.8e-51 207.2 170 62.9
Cre05.g237450 Chlamydomonas reinhardtii HOM05D005740 ORTHO05D007085 1.6e-34 151.0 241 37.8
Potri.012G009001 Populus trichocarpa HOM05D005740 ORTHO05D007085 2.0e-34 150.6 121 64.5
MCO12G039 Micromonas commoda HOM05D005740 ORTHO05D007085 2.7e-34 150.2 207 42.0
Potri.011G055100 Populus trichocarpa HOM05D005740 ORTHO05D007085 6.5e-33 145.6 189 47.1
PRCOL_00006097 Prasinoderma coloniale HOM05D005740 ORTHO05D007085 1.8e-27 127.5 208 31.7
C01p22950 Brassica napus HOM05D005740 ORTHO05D007085 5.9e-26 122.5 113 56.6
CAN.G65.153 Capsicum annuum HOM05D000273 ORTHO05D000198 2.3e-22 110.5 72 73.6
Potri.011G054700 Populus trichocarpa HOM05D005740 ORTHO05D007085 4.1e-19 99.8 85 57.6
BolC1t02230H Brassica oleracea HOM05D005740 ORTHO05D007085 9.2e-19 98.6 70 67.1
Sabra12G0002000 Salix brachista HOM05D000053 ORTHO05D000035 6.8e-14 82.4 81 59.3
MBI08_g17822_MAGBIO Magnolia biondii HOM05D005740 ORTHO05D007085 1.2e-13 81.6 46 82.6
C01p22940 Brassica napus HOM05D005740 ORTHO05D007085 1.5e-13 81.3 47 78.7
Sabra12G0002700 Salix brachista HOM05D005740 ORTHO05D000035 7.5e-13 79.0 78 57.7
Sabra12G0007800 Salix brachista HOM05D000053 ORTHO05D000035 3.2e-11 73.6 48 77.1
Sabra12G0002200 Salix brachista HOM05D005740 ORTHO05D007085 1.3e-09 68.2 70 55.7
C01p22960 Brassica napus HOM05D017401 ORTHO05D020044 1.7e-09 67.8 36 86.1
Sabra12G0002900 Salix brachista HOM05D005740 ORTHO05D007085 2.3e-09 67.4 45 75.6
Pp3c3_26240 Physcomitrium patens HOM05D005740 ORTHO05D007085 1.6e-07 61.2 51 56.9


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