Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042276 Camellia sinensis var. sinensis HOM05D004901 ORTHO05D005592 6.3e-100 367.5 189 100.0
Dinv02586 Davidia involucrata HOM05D004901 ORTHO05D005592 1.0e-49 200.7 183 64.5
Rhsim11G0056100 Rhododendron simsii HOM05D004901 ORTHO05D005592 4.3e-48 195.3 187 61.0
vmacro00755 Vaccinium macrocarpon HOM05D004901 ORTHO05D005592 3.8e-44 182.2 187 57.8
Hma1.2p1_0503F.1_g168030 Hydrangea macrophylla HOM05D004901 ORTHO05D005592 2.6e-37 159.5 187 55.1
Atru.chr13.2408 Acer truncatum HOM05D004901 ORTHO05D005592 6.9e-30 134.8 188 45.7
TAR628G1246 Trochodendron aralioides HOM05D004901 ORTHO05D005592 4.5e-29 132.1 193 47.7
QL09p004928 Quercus lobata HOM05D004901 ORTHO05D005592 4.9e-28 128.6 189 44.4
MSTRG.1544 Avicennia marina HOM05D004901 ORTHO05D005592 1.1e-27 127.5 186 45.7
Lj7C288T6 Lonicera japonica HOM05D004901 ORTHO05D005592 1.9e-27 126.7 186 47.3
Cfa008133 Carpinus fangiana HOM05D004901 ORTHO05D005592 9.3e-27 124.4 187 45.5
SGA_v2.0_scaffold24G10583 Striga asiatica HOM05D004901 ORTHO05D005592 3.9e-25 119.0 190 43.2
CiPaw.03G019300 Carya illinoinensis HOM05D004901 ORTHO05D005592 1.5e-24 117.1 183 50.3
Ciclev10000033m.g Citrus clementina HOM05D004901 ORTHO05D005592 5.6e-24 115.2 190 43.7
Peaxi162Scf00391g00532 Petunia axillaris HOM05D004901 ORTHO05D005592 1.3e-23 114.0 187 42.2
Migut.C01287 Erythranthe guttata HOM05D004901 ORTHO05D005592 2.8e-23 112.8 187 41.7
Gohir.D13G124700 Gossypium hirsutum HOM05D004901 ORTHO05D005592 3.7e-23 112.5 192 45.8
MD15G1404400 Malus domestica HOM05D004901 ORTHO05D005592 1.8e-22 110.2 184 42.4
Gorai.013G139300 Gossypium raimondii HOM05D004901 ORTHO05D005592 3.1e-22 109.4 192 44.3
COL.COLO4_12801 Corchorus olitorius HOM05D004901 ORTHO05D005592 4.0e-22 109.0 189 41.3
GSVIVG01034779001 Vitis vinifera HOM05D004901 ORTHO05D005592 6.9e-22 108.2 188 44.1
Oeu021225.1 Olea europaea HOM05D004901 ORTHO05D005592 1.5e-21 107.1 186 39.8
Prupe.1G551100 Prunus persica HOM05D004901 ORTHO05D005592 2.6e-21 106.3 188 42.0
CAN.G259.2 Capsicum annuum HOM05D004901 ORTHO05D005592 7.6e-21 104.8 181 40.9
MBI17_g21472_MAGBIO Magnolia biondii HOM05D004901 ORTHO05D005592 7.6e-21 104.8 197 42.1
Nitab4.5_0000167g0270 Nicotiana tabacum HOM05D004901 ORTHO05D005592 1.7e-20 103.6 188 39.9
Aqoxy6G00145 Aquilegia oxysepala HOM05D004901 ORTHO05D005592 2.2e-20 103.2 192 42.2
RcHm_v2.0_Chr7g0228871 Rosa chinensis HOM05D004901 ORTHO05D005592 2.9e-20 102.8 190 43.2
FvH4_7g03750 Fragaria vesca HOM05D004901 ORTHO05D005592 4.9e-20 102.1 186 41.9
FAN06G0910 Fragaria x ananassa HOM05D004901 ORTHO05D005592 4.9e-20 102.1 188 42.6
Gohir.A13G120700 Gossypium hirsutum HOM05D004901 ORTHO05D005592 4.9e-20 102.1 192 42.7
Duzib177G0087 Durio zibethinus HOM05D004901 ORTHO05D005592 1.4e-19 100.5 183 43.2
FAN03G3444 Fragaria x ananassa HOM05D004901 ORTHO05D005592 5.5e-19 98.6 186 41.9
SalBow7G4726 Salvia bowleyana HOM05D004901 ORTHO05D005592 7.1e-19 98.2 180 40.6
Nn5g27609 Nelumbo nucifera HOM05D004901 ORTHO05D005592 9.3e-19 97.8 194 41.2
Nitab4.5_0003010g0040 Nicotiana tabacum HOM05D004901 ORTHO05D005592 9.3e-19 97.8 156 41.7
Sopen11g010870 Solanum pennellii HOM05D004901 ORTHO05D005592 9.3e-19 97.8 186 39.2
Solyc11g020770.3 Solanum lycopersicum HOM05D004901 ORTHO05D005592 6.0e-18 95.1 186 38.7
DCAR_011526 Daucus carota HOM05D004901 ORTHO05D005592 1.8e-17 93.6 188 40.4
Manes.18G103400 Manihot esculenta HOM05D004901 ORTHO05D005592 3.9e-17 92.4 193 38.3
Potri.013G109600 Populus trichocarpa HOM05D004901 ORTHO05D005592 3.9e-17 92.4 189 41.8
Eucgr.F02585 Eucalyptus grandis HOM05D004901 ORTHO05D005592 3.3e-16 89.4 177 41.2
Prupe.2G019700 Prunus persica HOM05D004901 ORTHO05D005592 3.3e-16 89.4 188 40.4
PSO782G5557 Papaver somniferum HOM05D004901 ORTHO05D005592 5.6e-16 88.6 186 38.7
VMungo1127G1203 Vigna mungo HOM05D004901 ORTHO05D005592 7.4e-16 88.2 187 39.0
CANSAT56G0037 Cannabis sativa HOM05D004901 ORTHO05D005592 2.1e-15 86.7 189 41.8
Lj3g0009157 Lotus japonicus HOM05D004901 ORTHO05D005592 6.2e-15 85.1 188 37.2
PSO170G4536 Papaver somniferum HOM05D004901 ORTHO05D005592 6.2e-15 85.1 185 37.3
TPR.G26106 Trifolium pratense HOM05D004901 ORTHO05D005592 6.2e-15 85.1 187 38.0
Ca_19714_v3 Cicer arietinum L. HOM05D004901 ORTHO05D005592 2.4e-14 83.2 187 36.9
Phvul.011G000500 Phaseolus vulgaris HOM05D004901 ORTHO05D005592 3.1e-14 82.8 184 36.4
Sc23g0001370 Simmondsia chinensis HOM05D004901 ORTHO05D005592 9.0e-14 81.3 187 36.9
Medtr1g103260 Medicago truncatula HOM05D004901 ORTHO05D005592 1.2e-13 80.9 184 35.3
Sed0000511 Sechium edule HOM05D004901 ORTHO05D005592 1.7e-12 77.0 172 37.2
Glyma.08G238200 Glycine max HOM05D004901 ORTHO05D005592 2.2e-12 76.6 187 36.4
ClCG11G008660 Citrullus lanatus HOM05D004901 ORTHO05D005592 3.8e-12 75.9 172 37.2
MELO3C008073.2 Cucumis melo HOM05D004901 ORTHO05D005592 6.5e-12 75.1 173 36.4
Psat0s1585g0040 Pisum sativum HOM05D004901 ORTHO05D005592 9.3e-11 71.2 185 34.1
AUR62023519 Chenopodium quinoa HOM05D004901 ORTHO05D005592 2.7e-10 69.7 186 34.9
EL10Ac1g00109 Beta vulgaris HOM05D004901 ORTHO05D005592 3.5e-10 69.3 180 36.1
Hund16786 Selenicereus undatus HOM05D004901 ORTHO05D005592 4.6e-10 68.9 188 33.0
PGR042G2824 Punica granatum HOM05D004901 ORTHO05D005592 6.1e-10 68.6 188 31.9
ECA233G3640 Erigeron canadensis HOM05D004901 ORTHO05D000001 3.9e-09 65.9 181 33.7
Lalb_Chr01g0000031 Lupinus albus HOM05D004901 ORTHO05D005592 7.4e-08 61.6 183 34.4
Lsat_1_v5_gn_8_141780 Lactuca sativa HOM05D004901 ORTHO05D005592 2.2e-07 60.1 154 33.1
CDE04G3479 Ceratophyllum demersum HOM05D004901 ORTHO05D005592 2.8e-07 59.7 189 34.9
AL1G50380 Arabidopsis lyrata HOM05D004901 ORTHO05D005592 3.7e-07 59.3 189 33.3
HanXRQChr17g0559191 Helianthus annuus HOM05D004901 ORTHO05D005592 6.3e-07 58.5 182 32.4
Ah.04g162840 Amaranthus hybridus HOM05D004901 ORTHO05D005592 1.1e-06 57.8 188 33.5
AT1G35530 Arabidopsis thaliana HOM05D004901 ORTHO05D005592 1.8e-06 57.0 194 33.5
Sp1g30300 Schrenkiella parvula HOM05D004901 ORTHO05D005592 9.0e-06 54.7 159 33.3


User provided reference genes

Program Settings