Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042187 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 0.0e+00 1354.0 708 100.0
CSS0043166 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 0.0e+00 1344.7 709 99.6
Actinidia21699 Actinidia chinensis HOM05D003995 ORTHO05D004800 0.0e+00 1082.0 710 78.9
CSS0032416 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 5.1e-296 1020.8 698 78.9
Dinv30461 Davidia involucrata HOM05D003995 ORTHO05D004800 2.6e-284 981.9 709 74.3
GSVIVG01017039001 Vitis vinifera HOM05D003995 ORTHO05D004800 8.2e-278 960.3 711 71.2
Hma1.2p1_1689F.1_g297670 Hydrangea macrophylla HOM05D003995 ORTHO05D004800 1.2e-276 956.4 709 70.8
Dinv38000 Davidia involucrata HOM05D003995 ORTHO05D004800 1.3e-275 953.0 695 74.1
TAR624G1104 Trochodendron aralioides HOM05D003995 ORTHO05D004800 6.8e-272 940.6 717 71.3
Rhsim08G0225700 Rhododendron simsii HOM05D003995 ORTHO05D004800 1.4e-269 932.9 712 72.5
Hma1.2p1_0659F.1_g197350 Hydrangea macrophylla HOM05D003995 ORTHO05D004800 6.8e-264 914.1 711 69.6
Cfa002115 Carpinus fangiana HOM05D003995 ORTHO05D004800 7.7e-260 900.6 712 68.1
Thecc.06G096000 Theobroma cacao HOM05D003995 ORTHO05D004800 3.8e-259 898.3 712 67.3
Potri.001G187000 Populus trichocarpa HOM05D003995 ORTHO05D004800 9.5e-258 893.6 711 66.9
TAR102G0002 Trochodendron aralioides HOM05D003995 ORTHO05D004800 1.8e-256 889.4 719 67.0
COL.COLO4_30474 Corchorus olitorius HOM05D003995 ORTHO05D004800 2.6e-255 885.6 709 66.7
Haze_16334 Corylus avellana HOM05D003995 ORTHO05D004800 7.5e-255 884.0 729 66.4
Manes.04G131700 Manihot esculenta HOM05D003995 ORTHO05D004800 1.7e-251 872.8 711 65.1
QL05p021104 Quercus lobata HOM05D003995 ORTHO05D004800 6.6e-251 870.9 712 67.1
CiPaw.02G147500 Carya illinoinensis HOM05D003995 ORTHO05D004800 8.6e-251 870.5 713 66.1
Manes.11G036200 Manihot esculenta HOM05D003995 ORTHO05D004800 8.0e-249 864.0 728 64.8
Cc00_g10390 Coffea canephora HOM05D003995 ORTHO05D004800 2.4e-245 852.4 710 64.6
Gorai.009G136200 Gossypium raimondii HOM05D003995 ORTHO05D004800 5.4e-245 851.3 713 65.2
Prupe.3G063200 Prunus persica HOM05D003995 ORTHO05D004800 1.2e-244 850.1 712 64.3
CiPaw.01G233700 Carya illinoinensis HOM05D003995 ORTHO05D004800 3.0e-243 845.5 712 65.2
Gohir.D05G132500 Gossypium hirsutum HOM05D003995 ORTHO05D004800 1.1e-242 843.6 712 64.2
Oeu050081.1 Olea europaea HOM05D003995 ORTHO05D004800 2.5e-242 842.4 708 65.0
Gohir.A05G128000 Gossypium hirsutum HOM05D003995 ORTHO05D004800 5.6e-242 841.3 713 64.2
MD09G1207100 Malus domestica HOM05D003995 ORTHO05D004800 1.2e-241 840.1 714 64.0
Gohir.A02G119100 Gossypium hirsutum HOM05D003995 ORTHO05D004800 2.8e-241 839.0 713 64.7
CANSAT56G4226 Cannabis sativa HOM05D003995 ORTHO05D004800 1.4e-240 836.6 710 63.9
Gohir.D03G059900 Gossypium hirsutum HOM05D003995 ORTHO05D004800 3.1e-240 835.5 713 64.7
Glyma.07G017700 Glycine max HOM05D003995 ORTHO05D004800 1.2e-239 833.6 714 63.9
Peaxi162Scf00090g00073 Petunia axillaris HOM05D003995 ORTHO05D004800 2.6e-239 832.4 709 64.0
MD17G1187800 Malus domestica HOM05D003995 ORTHO05D004800 1.7e-238 829.7 721 63.1
Oeu017626.1 Olea europaea HOM05D003995 ORTHO05D004800 2.4e-237 825.9 711 63.9
FvH4_6g32000 Fragaria vesca HOM05D003995 ORTHO05D004800 7.1e-237 824.3 710 63.4
Nitab4.5_0002549g0020 Nicotiana tabacum HOM05D003995 ORTHO05D004800 6.0e-236 821.2 706 63.3
Aqoxy7G01498 Aquilegia oxysepala HOM05D003995 ORTHO05D004800 7.8e-236 820.8 715 63.5
TWI12G0239 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 2.3e-235 819.3 708 62.9
TWI75G1811 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 2.3e-235 819.3 706 63.5
Atru.chr1.3467 Acer truncatum HOM05D003995 ORTHO05D004800 3.9e-235 818.5 698 64.2
FAN05G2434 Fragaria x ananassa HOM05D003995 ORTHO05D004800 1.9e-234 816.2 728 62.1
Gorai.003G063800 Gossypium raimondii HOM05D003995 ORTHO05D004800 1.9e-234 816.2 705 64.0
Duzib235G0154 Durio zibethinus HOM05D003995 ORTHO05D004800 6.2e-233 811.2 697 62.8
VMungo0331G0049 Vigna mungo HOM05D003995 ORTHO05D004800 3.4e-231 805.4 712 62.5
Cpa.g.sc109.33 Carica papaya HOM05D003995 ORTHO05D004800 1.9e-229 799.7 702 61.5
Phvul.010G147000 Phaseolus vulgaris HOM05D003995 ORTHO05D004800 4.1e-229 798.5 711 60.9
TWI18G0079 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 4.1e-229 798.5 710 61.4
Ciclev10027380m.g Citrus clementina HOM05D003995 ORTHO05D004800 1.2e-228 797.0 736 60.6
Lj3g0012728 Lotus japonicus HOM05D003995 ORTHO05D004800 6.0e-228 794.7 713 61.2
Sc12g0009570 Simmondsia chinensis HOM05D003995 ORTHO05D004800 3.0e-227 792.3 712 60.8
CAN.G60.5 Capsicum annuum HOM05D003995 ORTHO05D004800 3.9e-227 792.0 709 61.6
MSTRG.23509 Avicennia marina HOM05D003995 ORTHO05D004800 6.6e-227 791.2 711 60.3
FAN14G0476 Fragaria x ananassa HOM05D003995 ORTHO05D004800 1.1e-226 790.4 712 61.1
arahy.Tifrunner.gnm1.ann1.8U94IH Arachis hypogaea HOM05D003995 ORTHO05D004800 7.3e-226 787.7 714 60.5
Hund06648 Selenicereus undatus HOM05D003995 ORTHO05D004800 7.3e-226 787.7 716 60.1
Glyma.08G202900 Glycine max HOM05D003995 ORTHO05D004800 2.1e-225 786.2 713 62.7
Gorai.010G229800 Gossypium raimondii HOM05D003995 ORTHO05D004800 1.4e-224 783.5 711 61.5
PGSC0003DMG400008535 Solanum tuberosum HOM05D003995 ORTHO05D004800 2.4e-224 782.7 714 61.2
Migut.H00960 Erythranthe guttata HOM05D003995 ORTHO05D004800 6.8e-224 781.2 708 59.6
PSO210G6397 Papaver somniferum HOM05D003995 ORTHO05D004800 5.8e-223 778.1 724 60.9
DCAR_019957 Daucus carota HOM05D003995 ORTHO05D004800 7.6e-223 777.7 709 60.4
PSO210G6330 Papaver somniferum HOM05D003995 ORTHO05D004800 9.9e-223 777.3 726 60.6
EL10Ac9g22110 Beta vulgaris HOM05D003995 ORTHO05D004800 2.2e-222 776.2 711 59.8
Lalb_Chr01g0013091 Lupinus albus HOM05D003995 ORTHO05D004800 2.2e-222 776.2 714 60.2
Lalb_Chr25g0280081 Lupinus albus HOM05D003995 ORTHO05D004800 2.9e-222 775.8 709 61.6
Gohir.D06G197450 Gossypium hirsutum HOM05D003995 ORTHO05D004800 5.4e-221 771.5 711 60.8
Ca_11524_v3 Cicer arietinum L. HOM05D003995 ORTHO05D004800 7.8e-220 767.7 716 60.1
FAN02G0974 Fragaria x ananassa HOM05D003995 ORTHO05D004800 7.8e-220 767.7 710 59.9
FAN09G2208 Fragaria x ananassa HOM05D003995 ORTHO05D004800 1.3e-217 760.4 710 59.7
Medtr8g013720 Medicago truncatula HOM05D003995 ORTHO05D004800 2.1e-217 759.6 722 59.4
PGR102G1287 Punica granatum HOM05D003995 ORTHO05D004800 2.1e-217 759.6 715 59.3
Nitab4.5_0004354g0010 Nicotiana tabacum HOM05D003995 ORTHO05D004800 2.4e-216 756.1 866 51.6
AUR62031875 Chenopodium quinoa HOM05D003995 ORTHO05D004800 4.0e-216 755.4 711 58.5
Psat4g198440 Pisum sativum HOM05D003995 ORTHO05D004800 7.6e-215 751.1 724 58.3
CsaV3_3G023750 Cucumis sativus L. HOM05D003995 ORTHO05D004800 3.8e-214 748.8 714 59.7
MBI04_g27074_MAGBIO Magnolia biondii HOM05D003266 ORTHO05D003718 1.1e-213 747.3 723 58.5
TPR.G14825 Trifolium pratense HOM05D003995 ORTHO05D004800 1.4e-213 746.9 722 58.7
Sopen04g017970 Solanum pennellii HOM05D003995 ORTHO05D004800 3.2e-213 745.7 710 59.3
Solyc04g047770.3 Solanum lycopersicum HOM05D003995 ORTHO05D004800 5.4e-213 745.0 710 59.4
Eucgr.F03056 Eucalyptus grandis HOM05D003995 ORTHO05D004800 7.9e-212 741.1 710 58.2
Lsat_1_v5_gn_2_39201 Lactuca sativa HOM05D003995 ORTHO05D004800 2.8e-209 732.6 725 60.7
PGR102G1422 Punica granatum HOM05D003995 ORTHO05D004800 1.4e-208 730.3 715 59.9
AUR62022169 Chenopodium quinoa HOM05D003995 ORTHO05D004800 3.1e-208 729.2 709 57.0
Sed0011470 Sechium edule HOM05D003995 ORTHO05D004800 9.9e-207 724.2 716 57.3
Thhalv10020187m.g Eutrema salsugineum HOM05D003995 ORTHO05D004800 1.3e-203 713.8 716 57.4
HanXRQChr14g0434431 Helianthus annuus HOM05D003995 ORTHO05D004800 2.3e-203 713.0 718 59.3
Sed0003559 Sechium edule HOM05D003995 ORTHO05D004800 6.7e-203 711.4 718 58.6
Eucgr.J02949 Eucalyptus grandis HOM05D003995 ORTHO05D004800 8.7e-203 711.1 711 57.2
Carub.0003s1602 Capsella rubella HOM05D003995 ORTHO05D004800 2.5e-202 709.5 716 57.7
THA.LOC104817968 Tarenaya hassleriana HOM05D003995 ORTHO05D004800 4.3e-202 708.8 716 57.4
Ah.01g005620 Amaranthus hybridus HOM05D003995 ORTHO05D004800 2.8e-201 706.1 713 55.3
SalBow1G2060 Salvia bowleyana HOM05D003995 ORTHO05D004800 6.2e-201 704.9 744 54.4
Sp3g14640 Schrenkiella parvula HOM05D003995 ORTHO05D004800 1.8e-200 703.4 715 56.5
SGA_v2.0_scaffold44G16540 Striga asiatica HOM05D003995 ORTHO05D004800 1.8e-200 703.4 719 57.4
Nn2g11632 Nelumbo nucifera HOM05D003995 ORTHO05D004800 3.1e-200 702.6 713 56.5
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 2.6e-199 699.5 701 57.5
Glyma.13G355800 Glycine max HOM05D003995 ORTHO05D004800 2.6e-199 699.5 721 56.0
THA.LOC104810534 Tarenaya hassleriana HOM05D003995 ORTHO05D004800 5.8e-199 698.4 709 56.4
AT3G16270 Arabidopsis thaliana HOM05D003995 ORTHO05D004800 1.3e-198 697.2 715 57.2
AL3G29010 Arabidopsis lyrata HOM05D003995 ORTHO05D004800 2.2e-198 696.4 716 57.5
CARHR091480 Cardamine hirsuta HOM05D003995 ORTHO05D004800 2.2e-198 696.4 716 56.8
BcaC05g28900 Brassica carinata HOM05D003995 ORTHO05D004800 1.1e-197 694.1 712 56.6
BolC5t33775H Brassica oleracea HOM05D003995 ORTHO05D004800 1.1e-197 694.1 712 56.6
BcaB06g25717 Brassica carinata HOM05D003995 ORTHO05D004800 2.5e-197 693.0 714 56.6
C05p50240 Brassica napus HOM05D003995 ORTHO05D004800 4.2e-197 692.2 713 56.9
A05p33250 Brassica napus HOM05D003995 ORTHO05D004800 1.6e-196 690.3 713 56.4
BraA05t22150Z Brassica rapa HOM05D003995 ORTHO05D004800 4.6e-196 688.7 712 56.5
Aa31LG8G3420 Aethionema arabicum HOM05D003995 ORTHO05D004800 1.8e-195 686.8 716 56.7
Phvul.005G170500 Phaseolus vulgaris HOM05D003995 ORTHO05D004800 2.1e-188 663.3 720 55.8
ATR0705G117 Amborella trichopoda HOM05D003995 ORTHO05D004800 2.3e-187 659.8 729 54.5
VMungo1080G0563 Vigna mungo HOM05D003995 ORTHO05D004800 1.9e-186 656.8 706 54.5
ECA248G2833 Erigeron canadensis HOM05D003995 ORTHO05D004800 1.0e-182 644.4 700 55.7
HanXRQChr01g0017801 Helianthus annuus HOM05D003995 ORTHO05D004800 3.8e-182 642.5 721 54.9
MELO3C012986.2 Cucumis melo HOM05D003995 ORTHO05D004800 4.6e-180 635.6 646 56.8
CDE02G3541 Ceratophyllum demersum HOM05D003995 ORTHO05D004800 1.6e-172 610.5 716 50.3
CDE08G1118 Ceratophyllum demersum HOM05D003995 ORTHO05D004800 3.0e-171 606.3 717 49.9
SHI11063 Sapria himalayana HOM05D003995 ORTHO05D004800 5.1e-171 605.5 695 51.8
Os01g0232400 Oryza sativa ssp. japonica HOM05D003995 ORTHO05D004800 1.2e-167 594.3 715 50.5
Zm00001eb339300 Zea mays HOM05D003995 ORTHO05D004800 4.0e-163 579.3 713 50.8
Zm00001eb119170 Zea mays HOM05D003995 ORTHO05D004800 1.8e-160 570.5 715 49.9
Nn3g18163 Nelumbo nucifera HOM05D003995 ORTHO05D004800 1.2e-154 551.2 384 75.0
HPP92_008092 Vanilla planifolia HOM05D003995 ORTHO05D004800 1.7e-153 547.4 738 48.8
vmacro18871 Vaccinium macrocarpon HOM05D003995 ORTHO05D004800 7.2e-149 531.9 321 86.6
Lj4A820G41 Lonicera japonica HOM05D003995 ORTHO05D004800 8.0e-148 528.5 551 54.8
MBI01_g24453_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 8.0e-148 528.5 697 48.9
SalBow1G1048 Salvia bowleyana HOM05D003995 ORTHO05D004800 8.3e-145 518.5 375 71.5
SalBow1G5856 Salvia bowleyana HOM05D003995 ORTHO05D004800 8.3e-145 518.5 375 71.5
Gohir.A06G188875 Gossypium hirsutum HOM05D003995 ORTHO05D004800 2.1e-140 503.8 373 72.9
QL04p048641 Quercus lobata HOM05D003995 ORTHO05D004800 5.2e-139 499.2 608 49.7
SEGI_23305 Sequoiadendron giganteum HOM05D003995 ORTHO05D004800 3.7e-137 493.0 738 43.5
RcHm_v2.0_Chr2g0139591 Rosa chinensis HOM05D003995 ORTHO05D004800 1.0e-126 458.4 319 76.2
Hund00665 Selenicereus undatus HOM05D003995 ORTHO05D004800 9.2e-112 408.7 495 49.1
Sabra01G0153300 Salix brachista HOM05D003995 ORTHO05D004800 1.3e-110 404.8 393 57.0
vmacro18870 Vaccinium macrocarpon HOM05D003995 ORTHO05D004800 1.7e-110 404.4 339 67.0
RcHm_v2.0_Chr2g0139601 Rosa chinensis HOM05D003995 ORTHO05D004800 1.2e-103 381.7 393 53.9
Actinidia32709 Actinidia chinensis HOM05D003995 ORTHO05D004800 1.1e-101 375.2 348 60.6
Mapoly0022s0096 Marchantia polymorpha HOM05D003995 ORTHO05D004800 4.2e-96 356.7 749 37.0
SMO340G0180 Selaginella moellendorffii HOM05D003995 ORTHO05D004800 1.8e-94 351.3 727 35.5
Pp3c2_17390 Physcomitrium patens HOM05D003995 ORTHO05D004800 7.4e-93 345.9 741 37.1
MBI01_g39826_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 2.8e-92 344.0 633 38.9
AagrBONN_evm.TU.Sc2ySwM_362.567 Anthoceros agrestis HOM05D003995 ORTHO05D004800 1.1e-88 332.0 786 34.4
arahy.Tifrunner.gnm1.ann1.QE1TJP Arachis hypogaea HOM05D003995 ORTHO05D004800 4.6e-87 326.6 391 48.6
Actinidia39150 Actinidia chinensis HOM05D003995 ORTHO05D004800 2.1e-76 291.2 412 49.3
ClCG07G013220 Citrullus lanatus HOM05D003995 ORTHO05D004800 1.9e-64 251.5 338 47.3
CBR_g36315 Chara braunii HOM05D003995 ORTHO05D004800 1.7e-57 228.4 492 35.6
Actinidia09000 Actinidia chinensis HOM05D003995 ORTHO05D004800 9.4e-56 222.6 427 39.3
Actinidia32710 Actinidia chinensis HOM05D003995 ORTHO05D004800 3.0e-54 217.6 151 77.5
CBR_g31940 Chara braunii HOM05D003995 ORTHO05D004800 3.7e-52 210.7 444 35.6
Glyma.15G018300 Glycine max HOM05D003995 ORTHO05D004800 1.8e-46 191.8 262 45.8
HanXRQChr10g0310971 Helianthus annuus HOM05D003995 ORTHO05D004800 7.0e-43 179.9 164 62.8
CDE02G4060 Ceratophyllum demersum HOM05D003995 ORTHO05D004800 1.2e-39 169.1 152 54.6
CBR_g25753 Chara braunii HOM05D003995 ORTHO05D004800 1.8e-38 165.2 235 42.6
Actinidia39149 Actinidia chinensis HOM05D003995 ORTHO05D004800 3.5e-34 151.0 160 55.0
Lj4C820T9 Lonicera japonica HOM05D003995 ORTHO05D004800 9.2e-27 126.3 69 89.9
FAN18G0014 Fragaria x ananassa HOM05D003995 ORTHO05D004800 7.8e-26 123.2 69 85.5
Cre12.g545300 Chlamydomonas reinhardtii HOM05D003995 ORTHO05D004800 1.3e-25 122.5 389 28.0
Cre12.g545150 Chlamydomonas reinhardtii HOM05D003995 ORTHO05D004800 6.8e-22 110.2 362 28.7
MBI07_g11499_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 2.6e-21 108.2 74 73.0
Actinidia08998 Actinidia chinensis HOM05D003995 ORTHO05D004800 9.8e-21 106.3 57 93.0
PRCOL_00002233 Prasinoderma coloniale HOM05D003995 ORTHO05D004800 2.2e-20 105.1 493 25.6
SEGI_12342 Sequoiadendron giganteum HOM05D003995 ORTHO05D004800 1.2e-18 99.4 81 55.6
FvH4_5g23151 Fragaria vesca HOM05D003995 ORTHO05D004800 5.0e-17 94.0 59 78.0
FvH4_7g32131 Fragaria vesca HOM05D003995 ORTHO05D004800 4.3e-16 90.9 59 76.3
Lsat_1_v5_gn_7_27180 Lactuca sativa HOM05D003995 ORTHO05D004605 1.1e-14 86.3 56 78.6
Zm00001eb248030 Zea mays HOM05D002169 ORTHO05D004800 3.4e-13 81.3 101 51.5
Gohir.D03G024850 Gossypium hirsutum HOM05D003995 ORTHO05D004800 7.5e-13 80.1 87 47.1
Gorai.003G083400 Gossypium raimondii HOM05D003995 ORTHO05D004800 2.2e-12 78.6 87 47.1
Pp3c1_18430 Physcomitrium patens HOM05D003995 ORTHO05D004800 1.9e-11 75.5 424 27.4
MBI03_g21265_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 6.6e-09 67.0 51 62.7
MCO13G545 Micromonas commoda HOM05D003995 ORTHO05D004800 1.1e-06 59.7 382 21.5


User provided reference genes

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