Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041994 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.6e-52 208.4 102 100.0
CSS0045195 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.2e-39 166.4 93 84.9
CSS0032088 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.1e-37 158.3 92 83.7
CSS0046575 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.6e-33 146.0 102 68.6
CSS0010523 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.2e-32 141.0 102 66.7
CSS0023133 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 6.8e-32 140.6 102 66.7
CSS0026614 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 6.8e-32 140.6 102 65.7
CSS0044722 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.5e-31 139.4 102 65.7
CSS0033039 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.5e-31 137.1 100 63.0
CSS0038037 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.2e-30 135.6 102 62.7
CSS0009370 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.8e-30 135.2 102 62.7
CSS0007439 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.4e-29 132.9 100 61.0
CSS0032736 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.8e-29 132.5 100 64.0
CSS0020468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.4e-29 132.1 102 62.7
CSS0043443 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.1e-29 131.7 102 61.8
CSS0049818 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.1e-29 131.7 102 64.7
CSS0036731 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.4e-29 131.0 102 60.8
CSS0013630 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.2e-28 129.8 84 75.0
CSS0028214 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.2e-28 129.8 92 65.2
CSS0027105 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.6e-28 129.4 102 60.8
CSS0041590 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.3e-27 125.6 102 59.8
CSS0016748 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 8.6e-27 123.6 102 59.8
CSS0035385 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.9e-26 122.5 99 59.6
CSS0032809 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.3e-26 121.7 92 63.0
CSS0048939 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.7e-25 117.9 90 60.0
CSS0016336 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 6.3e-22 107.5 86 58.1
CSS0032702 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 6.3e-22 107.5 81 63.0
CSS0006381 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.1e-21 106.7 82 61.0
CSS0006955 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.4e-21 104.4 102 49.0
CSS0002074 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.7e-20 102.1 94 48.9
CSS0004389 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.5e-20 101.3 102 51.0
CSS0045587 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.9e-20 100.9 98 49.0
CSS0045787 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 1.7e-19 99.4 94 50.0
CSS0001115 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.8e-19 98.2 102 45.1
CSS0014386 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.8e-19 98.2 101 45.5
CSS0032111 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.6e-19 97.4 102 49.0
CSS0028114 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.3e-18 95.1 98 52.0
CSS0007605 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 9.5e-18 93.6 96 43.8
CSS0010509 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.6e-17 92.8 100 39.0
CSS0037140 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.1e-17 92.4 101 44.6
CSS0034075 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.8e-16 89.4 70 60.0
CSS0020179 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.4e-15 84.7 99 40.4
CSS0017504 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.7e-14 81.6 85 47.1
CSS0047834 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.3e-14 80.5 99 37.4
CSS0016144 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-12 76.3 106 35.8
CSS0027359 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.6e-12 76.3 96 37.5
Actinidia35690 Actinidia chinensis HOM05D000003 ORTHO05D000022 4.6e-12 74.7 97 40.2
vmacro08191 Vaccinium macrocarpon HOM05D000548 ORTHO05D000987 7.8e-12 73.9 86 45.3
Hma1.2p1_0333F.1_g128210 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 1.0e-11 73.6 100 43.0
Hma1.2p1_3263F.1_g334663 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 1.0e-11 73.6 100 43.0
Hma1.2p1_3263F.1_g334666 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 1.0e-11 73.6 100 43.0
CSS0049418 Camellia sinensis var. sinensis HOM05D001185 ORTHO05D003777 1.3e-11 73.2 88 35.2
vmacro01816 Vaccinium macrocarpon HOM05D000489 ORTHO05D000372 1.3e-11 73.2 102 33.3
CSS0029354 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.3e-11 72.4 94 37.2
CSS0041944 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 3.0e-11 72.0 85 36.5
CSS0028054 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 5.0e-11 71.2 85 36.5
Atru.chr3.867 Acer truncatum HOM05D000003 ORTHO05D000022 6.6e-11 70.9 102 38.2
CSS0037375 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 6.6e-11 70.9 85 36.5
CSS0049107 Camellia sinensis var. sinensis HOM05D006120 ORTHO05D007913 6.6e-11 70.9 94 33.0
Atru.chr7.668 Acer truncatum HOM05D000003 ORTHO05D000004 1.9e-10 69.3 100 32.0
CSS0036470 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 1.9e-10 69.3 75 41.3
Atru.chr10.857 Acer truncatum HOM05D000003 ORTHO05D000004 2.5e-10 68.9 100 31.0
Atru.chr4.29 Acer truncatum HOM05D000003 ORTHO05D000022 2.5e-10 68.9 101 32.7
CSS0015976 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 3.3e-10 68.6 94 31.9
Atru.chr11.1308 Acer truncatum HOM05D000003 ORTHO05D000022 4.3e-10 68.2 100 36.0
Lj1P685T53 Lonicera japonica HOM05D000155 ORTHO05D000022 4.3e-10 68.2 97 38.1
Lj1P687T17 Lonicera japonica HOM05D000155 ORTHO05D000022 4.3e-10 68.2 97 38.1
Lj1P688T36 Lonicera japonica HOM05D000155 ORTHO05D000022 4.3e-10 68.2 97 38.1
CSS0011514 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.2e-09 66.6 55 54.5
vmacro04538 Vaccinium macrocarpon HOM05D006275 ORTHO05D007839 1.2e-09 66.6 78 43.6
Atru.chr1.1905 Acer truncatum HOM05D000003 ORTHO05D000022 2.1e-09 65.9 100 33.0
CSS0038564 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.1e-09 65.9 69 44.9
vmacro09610 Vaccinium macrocarpon HOM05D000003 ORTHO05D000007 2.8e-09 65.5 102 32.4
Atru.chr1.3262 Acer truncatum HOM05D000003 ORTHO05D000022 6.2e-09 64.3 101 33.7
Atru.chr11.82 Acer truncatum HOM05D000003 ORTHO05D000022 6.2e-09 64.3 100 32.0
Atru.chr4.172 Acer truncatum HOM05D000003 ORTHO05D000004 8.0e-09 63.9 97 33.0
Atru.chr6.2848 Acer truncatum HOM05D000003 ORTHO05D000022 8.0e-09 63.9 97 35.1
Atru.chr9.518 Acer truncatum HOM05D000003 ORTHO05D000022 8.0e-09 63.9 93 35.5
Hma1.2p1_0931F.1_g238170 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 1.1e-08 63.5 99 36.4
Atru.chr2.1762 Acer truncatum HOM05D000003 ORTHO05D000022 1.4e-08 63.2 91 37.4
Atru.chr10.629 Acer truncatum HOM05D000003 ORTHO05D000004 1.8e-08 62.8 101 30.7
Atru.chr8.829 Acer truncatum HOM05D000003 ORTHO05D000022 2.3e-08 62.4 102 32.4
Lj4P794T17 Lonicera japonica HOM05D016027 ORTHO05D000022 2.3e-08 62.4 93 33.3
COL.COLO4_19293 Corchorus olitorius HOM05D000155 ORTHO05D000022 4.0e-08 61.6 94 31.9
Sopen10g008360 Solanum pennellii HOM05D000003 ORTHO05D000022 4.0e-08 61.6 95 38.9
Atru.chr1.1302 Acer truncatum HOM05D000003 ORTHO05D000004 6.8e-08 60.8 100 36.0
Atru.chr13.1498 Acer truncatum HOM05D000003 ORTHO05D000022 6.8e-08 60.8 100 31.0
Atru.chr2.971 Acer truncatum HOM05D000003 ORTHO05D000022 6.8e-08 60.8 93 38.7
Atru.chr4.899 Acer truncatum HOM05D000003 ORTHO05D000022 6.8e-08 60.8 100 32.0
Atru.chr5.2141 Acer truncatum HOM05D000003 ORTHO05D000022 6.8e-08 60.8 101 32.7
Atru.chr1.2620 Acer truncatum HOM05D000003 ORTHO05D000004 8.9e-08 60.5 101 30.7
Atru.chr10.81 Acer truncatum HOM05D000003 ORTHO05D000004 8.9e-08 60.5 100 33.0
Atru.chr2.2857 Acer truncatum HOM05D000003 ORTHO05D000022 8.9e-08 60.5 100 33.0
Lj9P217T13 Lonicera japonica HOM05D000003 ORTHO05D000022 8.9e-08 60.5 98 30.6
Solyc07g056380.1 Solanum lycopersicum HOM05D000003 ORTHO05D000022 8.9e-08 60.5 93 36.6
Atru.chr12.2484 Acer truncatum HOM05D000003 ORTHO05D000022 1.2e-07 60.1 100 34.0
Atru.chr6.1397 Acer truncatum HOM05D000003 ORTHO05D000022 1.2e-07 60.1 101 36.6
Atru.chr7.120 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-07 60.1 96 33.3
RcHm_v2.0_Chr4g0406871 Rosa chinensis HOM05D000003 ORTHO05D000004 1.2e-07 60.1 94 30.9
vmacro11435 Vaccinium macrocarpon HOM05D000455 ORTHO05D426981 1.2e-07 60.1 70 42.9
vmacro18663 Vaccinium macrocarpon HOM05D000010 ORTHO05D000022 1.2e-07 60.1 79 35.4
Atru.chr1.1701 Acer truncatum HOM05D000003 ORTHO05D000022 1.5e-07 59.7 100 33.0
Atru.chr4.458 Acer truncatum HOM05D000003 ORTHO05D000022 1.5e-07 59.7 100 37.0
Atru.chr5.1996 Acer truncatum HOM05D000003 ORTHO05D000022 1.5e-07 59.7 97 30.9
Atru.chr6.2380 Acer truncatum HOM05D000003 ORTHO05D000022 1.5e-07 59.7 98 34.7
Sopen10g006600 Solanum pennellii HOM05D000003 ORTHO05D001349 1.5e-07 59.7 89 39.3
vmacro00861 Vaccinium macrocarpon HOM05D000042 ORTHO05D000980 1.5e-07 59.7 90 41.1
Atru.chr10.890 Acer truncatum HOM05D000003 ORTHO05D000022 2.0e-07 59.3 97 30.9
Atru.chr12.663 Acer truncatum HOM05D000003 ORTHO05D000022 2.0e-07 59.3 93 33.3
TWI81G0242 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.0e-07 59.3 96 35.4
Atru.chr3.2200 Acer truncatum HOM05D000003 ORTHO05D000022 2.6e-07 58.9 102 29.4
Atru.chr1.956 Acer truncatum HOM05D000003 ORTHO05D000006 3.4e-07 58.5 101 31.7
Atru.chr6.1170 Acer truncatum HOM05D000003 ORTHO05D000022 3.4e-07 58.5 83 34.9
Atru.chr2.1419 Acer truncatum HOM05D000003 ORTHO05D000022 4.4e-07 58.2 97 33.0
Atru.chr3.1552 Acer truncatum HOM05D000003 ORTHO05D000022 4.4e-07 58.2 88 34.1
Nitab4.5_0007519g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000022 4.4e-07 58.2 93 33.3
QL01p016530 Quercus lobata HOM05D000003 ORTHO05D000022 4.4e-07 58.2 94 31.9
CSS0039165 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.8e-07 57.8 68 39.7
RcHm_v2.0_Chr2g0146161 Rosa chinensis HOM05D000003 ORTHO05D000022 5.8e-07 57.8 93 33.3
vmacro20205 Vaccinium macrocarpon HOM05D002235 ORTHO05D006252 5.8e-07 57.8 77 35.1
Atru.chr2.2708 Acer truncatum HOM05D000003 ORTHO05D000022 7.5e-07 57.4 100 31.0
Atru.chr3.2393 Acer truncatum HOM05D000003 ORTHO05D000022 7.5e-07 57.4 97 33.0
Nitab4.5_0007388g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000022 7.5e-07 57.4 93 33.3
Atru.chr4.1024 Acer truncatum HOM05D000003 ORTHO05D000022 9.8e-07 57.0 97 33.0
RcHm_v2.0_Chr2g0152401 Rosa chinensis HOM05D000003 ORTHO05D000022 9.8e-07 57.0 93 33.3
vmacro01820 Vaccinium macrocarpon HOM05D001647 ORTHO05D001191 9.8e-07 57.0 95 32.6
Atru.chr3.2099 Acer truncatum HOM05D000003 ORTHO05D000022 1.3e-06 56.6 97 32.0
Atru.chr13.1101 Acer truncatum HOM05D000003 ORTHO05D000022 1.7e-06 56.2 101 30.7
RcHm_v2.0_Chr3g0484381 Rosa chinensis HOM05D000003 ORTHO05D000022 1.7e-06 56.2 92 30.4
RcHm_v2.0_Chr3g0484471 Rosa chinensis HOM05D000003 ORTHO05D000022 1.7e-06 56.2 92 30.4
Atru.chr1.276 Acer truncatum HOM05D000003 ORTHO05D000022 2.2e-06 55.8 100 31.0
Atru.chr12.1173 Acer truncatum HOM05D000003 ORTHO05D000022 2.2e-06 55.8 90 33.3
Atru.chr3.1879 Acer truncatum HOM05D000003 ORTHO05D000022 2.2e-06 55.8 83 34.9
Atru.chr1.2517 Acer truncatum HOM05D000003 ORTHO05D000004 2.9e-06 55.5 83 37.3
Atru.chr2.1642 Acer truncatum HOM05D000003 ORTHO05D000022 2.9e-06 55.5 87 34.5
Atru.chr2.3435 Acer truncatum HOM05D000003 ORTHO05D000022 2.9e-06 55.5 100 32.0
Atru.chr4.1844 Acer truncatum HOM05D000003 ORTHO05D000022 2.9e-06 55.5 79 34.2
Atru.chr7.170 Acer truncatum HOM05D000003 ORTHO05D000022 2.9e-06 55.5 99 29.3
Solyc10g018550.1 Solanum lycopersicum HOM05D000003 ORTHO05D000022 2.9e-06 55.5 91 37.4
Atru.chr1.1867 Acer truncatum HOM05D000003 ORTHO05D000022 3.7e-06 55.1 83 36.1
Atru.chr8.699 Acer truncatum HOM05D000003 ORTHO05D000022 3.7e-06 55.1 95 28.4
FvH4_2g12061 Fragaria vesca HOM05D000003 ORTHO05D000022 3.7e-06 55.1 87 31.0
Lj2C374T9 Lonicera japonica HOM05D000155 ORTHO05D000022 3.7e-06 55.1 93 32.3
Atru.chr1.2428 Acer truncatum HOM05D000003 ORTHO05D000004 4.9e-06 54.7 93 32.3
Atru.chr5.2238 Acer truncatum HOM05D000003 ORTHO05D000004 4.9e-06 54.7 92 32.6
Nitab4.5_0000593g0300 Nicotiana tabacum HOM05D000003 ORTHO05D000022 4.9e-06 54.7 70 37.1
RcHm_v2.0_Chr2g0144631 Rosa chinensis HOM05D000003 ORTHO05D000022 4.9e-06 54.7 92 32.6
Atru.chr3.3019 Acer truncatum HOM05D000003 ORTHO05D000022 6.4e-06 54.3 84 29.8
Atru.chr8.1100 Acer truncatum HOM05D000003 ORTHO05D000022 6.4e-06 54.3 89 33.7
Psat1g119200 Pisum sativum HOM05D000003 ORTHO05D000022 6.4e-06 54.3 93 32.3
RcHm_v2.0_Chr5g0016411 Rosa chinensis HOM05D000003 ORTHO05D000022 6.4e-06 54.3 94 27.7
Atru.chr3.2067 Acer truncatum HOM05D000003 ORTHO05D000022 8.3e-06 53.9 101 28.7
Atru.chr8.30 Acer truncatum HOM05D000003 ORTHO05D000022 8.3e-06 53.9 92 32.6
Glyma.13G224100 Glycine max HOM05D000062 ORTHO05D000043 8.3e-06 53.9 93 32.3


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