Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040732 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 3.7e-88 330.1 237 100.0
CSS0039047 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 1.4e-63 248.4 238 83.2
CSS0048750 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 7.0e-63 246.1 237 76.4
CSS0035585 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 8.6e-61 239.2 237 75.1
CSS0036099 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 3.4e-57 227.3 241 77.2
CSS0002817 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 1.7e-56 224.9 237 59.1
CSS0038623 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 8.1e-35 152.9 241 46.9
CSS0009041 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 4.0e-34 150.6 248 53.6
CSS0011266 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 4.4e-33 147.1 250 52.0
Actinidia04470 Actinidia chinensis HOM05D000162 ORTHO05D000090 7.1e-23 113.2 205 38.0
CSS0001676 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 6.0e-22 110.2 141 57.4
Actinidia04475 Actinidia chinensis HOM05D000162 ORTHO05D000090 1.5e-20 105.5 203 39.9
CSS0025075 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 4.3e-20 104.0 150 60.7
Actinidia04473 Actinidia chinensis HOM05D000162 ORTHO05D000090 5.6e-20 103.6 171 48.5
vmacro08416 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 2.8e-19 101.3 225 34.7
Rhsim04G0181900 Rhododendron simsii HOM05D000162 ORTHO05D000090 1.1e-15 89.4 211 34.1
Rhsim04G0181600 Rhododendron simsii HOM05D000162 ORTHO05D000090 3.2e-15 87.8 213 33.8
vmacro08467 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 2.7e-14 84.7 207 31.4
vmacro08434 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 4.8e-11 73.9 189 32.3
Duzib106G0930 Durio zibethinus HOM05D000162 ORTHO05D000090 8.1e-11 73.2 107 35.5
CSS0005645 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 1.1e-10 72.8 39 84.6
CSS0035669 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 1.1e-10 72.8 39 84.6
Actinidia36711 Actinidia chinensis HOM05D000162 ORTHO05D000090 1.4e-10 72.4 148 44.6
CSS0022066 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 1.8e-10 72.0 42 78.6
Hma1.2p1_1276F.1_g272140 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 1.8e-10 72.0 160 28.8
Lj8P594T21 Lonicera japonica HOM05D000162 ORTHO05D000090 1.8e-10 72.0 52 61.5
CSS0005197 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 2.4e-10 71.6 128 57.8
Lj8P598T3 Lonicera japonica HOM05D000162 ORTHO05D000090 6.9e-10 70.1 102 38.2
CSS0012675 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 9.0e-10 69.7 42 71.4
CSS0026184 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 9.0e-10 69.7 39 82.1
Lj8P594T20 Lonicera japonica HOM05D000162 ORTHO05D000090 9.0e-10 69.7 52 59.6
Hma1.2p1_2917F.1_g330320 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 1.2e-09 69.3 159 28.3
vmacro08436 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 2.0e-09 68.6 182 30.2
Lj8P594T25 Lonicera japonica HOM05D000162 ORTHO05D000090 2.6e-09 68.2 52 59.6
CSS0018187 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 3.4e-09 67.8 128 51.6
CSS0025424 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 3.4e-09 67.8 128 51.6
CSS0032657 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 3.4e-09 67.8 128 50.8
Hma1.2p1_1798F.1_g302890 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 3.4e-09 67.8 197 27.4
Lj8P598T5 Lonicera japonica HOM05D000162 ORTHO05D000090 4.5e-09 67.4 52 55.8
HanXRQChr13g0424461 Helianthus annuus HOM05D000162 ORTHO05D000090 5.8e-09 67.0 197 29.9
Nn1g02624 Nelumbo nucifera HOM05D000162 ORTHO05D000090 7.6e-09 66.6 190 29.5
Lj8P594T18 Lonicera japonica HOM05D000162 ORTHO05D000090 9.9e-09 66.2 109 39.4
Hma1.2p1_0310F.1_g120980 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 1.3e-08 65.9 166 31.3
HanXRQChr10g0284831 Helianthus annuus HOM05D000162 ORTHO05D000090 1.7e-08 65.5 158 27.2
Lsat_1_v5_gn_3_111021 Lactuca sativa HOM05D000162 ORTHO05D000090 1.7e-08 65.5 171 27.5
Hma1.2p1_1076F.1_g254520 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 2.2e-08 65.1 166 30.1
Hma1.2p1_1076F.1_g254530 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 2.2e-08 65.1 126 32.5
Lj8P592T17 Lonicera japonica HOM05D000162 ORTHO05D000090 3.8e-08 64.3 52 53.8
Lj8P591T11 Lonicera japonica HOM05D000162 ORTHO05D000090 4.9e-08 63.9 49 57.1
PGSC0003DMG400003403 Solanum tuberosum HOM05D000162 ORTHO05D000090 4.9e-08 63.9 158 26.6
Dinv41259 Davidia involucrata HOM05D000162 ORTHO05D000090 6.4e-08 63.5 204 26.5
ECA232G1819 Erigeron canadensis HOM05D000162 ORTHO05D000090 6.4e-08 63.5 155 27.1
ECA238G2994 Erigeron canadensis HOM05D004933 ORTHO05D005465 8.4e-08 63.2 177 28.2
Glyma.16G161900 Glycine max HOM05D000162 ORTHO05D000090 1.4e-07 62.4 101 38.6
Hma1.2p1_1798F.1_g302880 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 1.4e-07 62.4 236 26.7
SalBow7G2569 Salvia bowleyana HOM05D000162 ORTHO05D000090 1.4e-07 62.4 162 28.4
TPR.G1437 Trifolium pratense HOM05D000162 ORTHO05D000090 1.4e-07 62.4 52 53.8
CSS0041306 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 1.9e-07 62.0 193 28.5
Hma1.2p1_1276F.1_g272060 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 1.9e-07 62.0 210 25.2
SalBow7G4032 Salvia bowleyana HOM05D000162 ORTHO05D000090 2.4e-07 61.6 202 25.7
HanXRQChr07g0203991 Helianthus annuus HOM05D000162 ORTHO05D000090 3.2e-07 61.2 158 25.3
Prupe.6G087600 Prunus persica HOM05D000162 ORTHO05D000090 3.2e-07 61.2 134 25.4
Sopen06g002220 Solanum pennellii HOM05D000162 ORTHO05D000090 3.2e-07 61.2 157 26.8
ECA238G1168 Erigeron canadensis HOM05D000162 ORTHO05D000090 4.2e-07 60.8 123 29.3
vmacro08432 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 4.2e-07 60.8 188 28.7
Glyma.16G163100 Glycine max HOM05D000162 ORTHO05D000090 5.5e-07 60.5 95 37.9
HanXRQChr07g0203531 Helianthus annuus HOM05D000162 ORTHO05D000090 7.1e-07 60.1 155 36.1
HanXRQChr07g0204091 Helianthus annuus HOM05D000162 ORTHO05D000090 7.1e-07 60.1 157 26.8
HanXRQChr09g0252881 Helianthus annuus HOM05D000162 ORTHO05D000090 9.3e-07 59.7 203 26.1
vmacro13802 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 9.3e-07 59.7 123 30.1
Duzib106G1878 Durio zibethinus HOM05D000162 ORTHO05D000090 1.2e-06 59.3 79 31.6
HanXRQChr07g0204941 Helianthus annuus HOM05D000162 ORTHO05D000090 1.2e-06 59.3 123 29.3
HanXRQChr14g0435461 Helianthus annuus HOM05D000162 ORTHO05D000090 1.2e-06 59.3 158 25.9
HanXRQChr07g0204971 Helianthus annuus HOM05D000162 ORTHO05D000090 1.6e-06 58.9 158 25.3
Lsat_1_v5_gn_0_17660 Lactuca sativa HOM05D000162 ORTHO05D000090 1.6e-06 58.9 158 24.7
SalBow3G1814 Salvia bowleyana HOM05D000162 ORTHO05D000090 1.6e-06 58.9 118 29.7
ECA232G2031 Erigeron canadensis HOM05D000006 ORTHO05D000067 2.1e-06 58.5 162 36.4
Glyma.08G053100 Glycine max HOM05D000162 ORTHO05D000090 2.1e-06 58.5 57 49.1
HanXRQChr06g0180911 Helianthus annuus HOM05D000162 ORTHO05D000090 2.1e-06 58.5 127 27.6
HanXRQChr07g0203521 Helianthus annuus HOM05D000162 ORTHO05D000090 2.7e-06 58.2 123 30.1
Solyc06g007300.2 Solanum lycopersicum HOM05D000162 ORTHO05D000090 2.7e-06 58.2 157 25.5
Solyc06g007740.1 Solanum lycopersicum HOM05D000162 ORTHO05D000090 2.7e-06 58.2 157 25.5
vmacro13800 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 2.7e-06 58.2 162 27.8
CAN.G241.21 Capsicum annuum HOM05D000162 ORTHO05D000090 3.5e-06 57.8 194 25.3
Glyma.16G162100 Glycine max HOM05D000162 ORTHO05D000090 3.5e-06 57.8 101 36.6
HanXRQChr03g0090771 Helianthus annuus HOM05D000162 ORTHO05D000090 3.5e-06 57.8 127 27.6
HanXRQChr06g0180871 Helianthus annuus HOM05D000162 ORTHO05D000090 3.5e-06 57.8 127 27.6
Prupe.3G114700 Prunus persica HOM05D000162 ORTHO05D000090 3.5e-06 57.8 168 32.1
PGSC0003DMG400020644 Solanum tuberosum HOM05D000162 ORTHO05D000090 3.5e-06 57.8 157 25.5
TWI36G0958 Tripterygium wilfordii HOM05D000162 ORTHO05D000090 3.5e-06 57.8 94 37.2
MSTRG.11881 Avicennia marina HOM05D000162 ORTHO05D000090 6.0e-06 57.0 124 28.2
Duzib106G0727 Durio zibethinus HOM05D000162 ORTHO05D000090 6.0e-06 57.0 77 32.5
FAN21G1717 Fragaria x ananassa HOM05D000162 ORTHO05D000090 6.0e-06 57.0 74 39.2
FAN25G3591 Fragaria x ananassa HOM05D000162 ORTHO05D000090 6.0e-06 57.0 91 33.0
HanXRQChr03g0090791 Helianthus annuus HOM05D000162 ORTHO05D000090 6.0e-06 57.0 127 27.6
Lsat_1_v5_gn_2_126841 Lactuca sativa HOM05D000162 ORTHO05D000090 6.0e-06 57.0 123 29.3
Medtr0019s0210 Medicago truncatula HOM05D000162 ORTHO05D000090 6.0e-06 57.0 101 39.6
vmacro08435 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 6.0e-06 57.0 156 30.8
CAN.G1768.10 Capsicum annuum HOM05D000162 ORTHO05D000090 7.9e-06 56.6 155 25.2
Cc02_g34450 Coffea canephora HOM05D000162 ORTHO05D000090 7.9e-06 56.6 56 46.4
Duzib106G0712 Durio zibethinus HOM05D000162 ORTHO05D000090 7.9e-06 56.6 106 31.1
ECA232G1497 Erigeron canadensis HOM05D000162 ORTHO05D000090 7.9e-06 56.6 155 26.5
FvH4_3g35200 Fragaria vesca HOM05D000162 ORTHO05D000090 7.9e-06 56.6 71 38.0
HanXRQChr04g0095081 Helianthus annuus HOM05D000162 ORTHO05D000090 7.9e-06 56.6 127 26.8
Hma1.2p1_1798F.1_g302900 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 7.9e-06 56.6 113 31.0


User provided reference genes

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