Gene: vmacro13802

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro13802
  • Transcript Identifier vmacro13802-RA
  • Gene Type Coding gene
  • Location chr7_Vaccinium_macrocarpon_Stevens_v1 : 9267474-9269378 : positive

Gene Family Information

  • ID HOM05D000162
  • #Genes/#Species 2282/81
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro13802_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to At1g62930: Pentatricopeptide repeat-containing protein At1g62930, chloroplastic (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000966
ISO
PLAZA Integrative OrthologyRNA 5'-end processing AT1G12620
GO:0080156
ISO
PLAZA Integrative Orthologymitochondrial mRNA modification AT1G12700
GO:0006397
ISO
PLAZA Integrative OrthologymRNA processing AT1G62930
GO:0090617
ISO
PLAZA Integrative Orthologymitochondrial mRNA 5'-end processing AT1G12700
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT1G62720
GO:0090615
ISO
PLAZA Integrative Orthologymitochondrial mRNA processing AT1G12300

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT1G12300
GO:0004016
ISO
PLAZA Integrative Orthologyadenylate cyclase activity AT1G62590

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G12300

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
Mapman id Description
35.1 not assigned.annotated