Gene: Solyc06g007300.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g007300.2
  • Transcript Identifier Solyc06g007300.2.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 1340738-1342516 : negative

Gene Family Information

  • ID HOM05D000162
  • #Genes/#Species 2282/81
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g007300.2.1
  • uniprot A0A3Q7HIW7
  • gene_id Solyc06g007300

Descriptions

  • Description Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2U1LV08_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000966
ISO
PLAZA Integrative OrthologyRNA 5'-end processing AT1G12620
GO:0080156
ISO
PLAZA Integrative Orthologymitochondrial mRNA modification AT1G12700
GO:0090617
ISO
PLAZA Integrative Orthologymitochondrial mRNA 5'-end processing AT1G12700
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT1G62720
GO:0090615
ISO
PLAZA Integrative Orthologymitochondrial mRNA processing AT1G12300

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT1G12300

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G12300

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
Mapman id Description
35.1 not assigned.annotated