Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040146 Camellia sinensis var. sinensis HOM05D005173 ORTHO05D006214 3.2e-122 441.8 228 100.0
CSS0048515 Camellia sinensis var. sinensis HOM05D005173 ORTHO05D006214 7.8e-20 101.7 54 81.5
Dinv42364 Davidia involucrata HOM05D005173 ORTHO05D006214 1.3e-19 100.9 54 81.5
CDE04G2820 Ceratophyllum demersum HOM05D005173 ORTHO05D006214 3.9e-19 99.4 54 77.8
Manes.16G098000 Manihot esculenta HOM05D005173 ORTHO05D006214 3.9e-19 99.4 54 79.6
Dinv25585 Davidia involucrata HOM05D005173 ORTHO05D006214 6.6e-19 98.6 54 79.6
Duzib150G1290 Durio zibethinus HOM05D005173 ORTHO05D006214 6.6e-19 98.6 54 79.6
RcHm_v2.0_Chr2g0094221 Rosa chinensis HOM05D005173 ORTHO05D006214 8.6e-19 98.2 54 79.6
Migut.L01541 Erythranthe guttata HOM05D005173 ORTHO05D006214 1.1e-18 97.8 54 79.6
Lalb_Chr07g0181031 Lupinus albus HOM05D005173 ORTHO05D006214 1.1e-18 97.8 54 81.5
Prupe.7G203600 Prunus persica HOM05D005173 ORTHO05D006214 1.1e-18 97.8 54 79.6
Solyc07g041200.3 Solanum lycopersicum HOM05D005173 ORTHO05D006214 1.5e-18 97.4 54 77.8
Sopen07g020470 Solanum pennellii HOM05D005173 ORTHO05D006214 1.5e-18 97.4 54 77.8
TWI32G0591 Tripterygium wilfordii HOM05D005173 ORTHO05D006214 1.5e-18 97.4 54 77.8
BcaB08g36505 Brassica carinata HOM05D005173 ORTHO05D006214 1.9e-18 97.1 54 75.9
COL.COLO4_18139 Corchorus olitorius HOM05D005173 ORTHO05D006214 1.9e-18 97.1 53 79.2
PSO063G3756 Papaver somniferum HOM05D005173 ORTHO05D006214 1.9e-18 97.1 54 79.6
PSO421G0551 Papaver somniferum HOM05D005173 ORTHO05D006214 1.9e-18 97.1 54 79.6
GSVIVG01015121001 Vitis vinifera HOM05D005173 ORTHO05D006214 1.9e-18 97.1 54 77.8
Ciclev10008959m.g Citrus clementina HOM05D005173 ORTHO05D006214 2.5e-18 96.7 54 79.6
Phvul.003G133200 Phaseolus vulgaris HOM05D005173 ORTHO05D006214 2.5e-18 96.7 54 77.8
Sc18g0002360 Simmondsia chinensis HOM05D005173 ORTHO05D006214 2.5e-18 96.7 54 77.8
VMungo1215G2902 Vigna mungo HOM05D005173 ORTHO05D006214 2.5e-18 96.7 54 77.8
Atru.chr7.1658 Acer truncatum HOM05D005173 ORTHO05D006214 3.3e-18 96.3 54 77.8
CANSAT56G2861 Cannabis sativa HOM05D005173 ORTHO05D006214 3.3e-18 96.3 54 77.8
PGSC0003DMG400020952 Solanum tuberosum HOM05D005173 ORTHO05D006214 3.3e-18 96.3 54 75.9
Thecc.09G081500 Theobroma cacao HOM05D005173 ORTHO05D006214 3.3e-18 96.3 54 77.8
Eucgr.C00843 Eucalyptus grandis HOM05D005173 ORTHO05D006214 4.3e-18 95.9 54 77.8
Gohir.D13G197600 Gossypium hirsutum HOM05D005173 ORTHO05D006214 4.3e-18 95.9 54 74.1
Gorai.013G226300 Gossypium raimondii HOM05D005173 ORTHO05D006214 4.3e-18 95.9 54 74.1
A10p19490 Brassica napus HOM05D005173 ORTHO05D006214 5.6e-18 95.5 54 74.1
BraA10t44025Z Brassica rapa HOM05D005173 ORTHO05D006214 5.6e-18 95.5 54 74.1
CAN.G88.5 Capsicum annuum HOM05D005173 ORTHO05D006214 5.6e-18 95.5 54 77.8
Cpa.g.sc28.94 Carica papaya HOM05D005173 ORTHO05D006214 5.6e-18 95.5 79 57.0
MELO3C015504.2 Cucumis melo HOM05D005173 ORTHO05D006214 5.6e-18 95.5 53 79.2
CsaV3_1G040770 Cucumis sativus L. HOM05D005173 ORTHO05D006214 5.6e-18 95.5 53 79.2
MD15G1213300 Malus domestica HOM05D005173 ORTHO05D006214 5.6e-18 95.5 54 77.8
Actinidia39689 Actinidia chinensis HOM05D005173 ORTHO05D006214 7.3e-18 95.1 54 75.9
BcaC04g19437 Brassica carinata HOM05D005173 ORTHO05D006214 7.3e-18 95.1 54 74.1
C09p55690 Brassica napus HOM05D005173 ORTHO05D006214 7.3e-18 95.1 54 74.1
FvH4_1g08150 Fragaria vesca HOM05D005173 ORTHO05D006214 7.3e-18 95.1 54 77.8
FAN19G2713 Fragaria x ananassa HOM05D005173 ORTHO05D006214 7.3e-18 95.1 54 77.8
FAN23G0270 Fragaria x ananassa HOM05D005173 ORTHO05D006214 7.3e-18 95.1 54 77.8
FAN26G1854 Fragaria x ananassa HOM05D005173 ORTHO05D006214 7.3e-18 95.1 54 77.8
FAN26G2726 Fragaria x ananassa HOM05D005173 ORTHO05D006214 7.3e-18 95.1 54 77.8
FAN28G2824 Fragaria x ananassa HOM05D005173 ORTHO05D006214 7.3e-18 95.1 54 77.8
Nn8g38732 Nelumbo nucifera HOM05D005173 ORTHO05D006214 7.3e-18 95.1 54 75.9
Oeu054818.3 Olea europaea HOM05D005173 ORTHO05D006214 7.3e-18 95.1 54 74.1
MD02G1086100 Malus domestica HOM05D005173 ORTHO05D006214 9.5e-18 94.7 54 77.8
THA.LOC104799624 Tarenaya hassleriana HOM05D005173 ORTHO05D006214 9.5e-18 94.7 54 77.8
MSTRG.10526 Avicennia marina HOM05D005173 ORTHO05D006214 1.2e-17 94.4 54 75.9
MSTRG.19482 Avicennia marina HOM05D005173 ORTHO05D006214 1.2e-17 94.4 54 75.9
A02p06290 Brassica napus HOM05D005173 ORTHO05D006214 1.2e-17 94.4 54 74.1
BraA02t05577Z Brassica rapa HOM05D005173 ORTHO05D006214 1.2e-17 94.4 54 74.1
CARHR192290 Cardamine hirsuta HOM05D005173 ORTHO05D006214 1.2e-17 94.4 54 74.1
Lalb_Chr12g0200011 Lupinus albus HOM05D005173 ORTHO05D006214 1.2e-17 94.4 54 77.8
TAR624G0255 Trochodendron aralioides HOM05D005173 ORTHO05D006214 1.2e-17 94.4 54 75.9
ClCG03G015280 Citrullus lanatus HOM05D005173 ORTHO05D006214 1.6e-17 94.0 54 75.9
Gohir.A13G192200 Gossypium hirsutum HOM05D005173 ORTHO05D006214 1.6e-17 94.0 54 74.1
Manes.03G037700 Manihot esculenta HOM05D005173 ORTHO05D006214 1.6e-17 94.0 54 75.9
Nitab4.5_0001488g0160 Nicotiana tabacum HOM05D005173 ORTHO05D006214 1.6e-17 94.0 47 85.1
Sabra18G0057400 Salix brachista HOM05D005173 ORTHO05D006214 1.6e-17 94.0 54 75.9
AL6G32050 Arabidopsis lyrata HOM05D005173 ORTHO05D006214 2.1e-17 93.6 54 72.2
Carub.0006s1885 Capsella rubella HOM05D005173 ORTHO05D006214 2.1e-17 93.6 54 74.1
Lj4g0027115 Lotus japonicus HOM05D005173 ORTHO05D006214 2.1e-17 93.6 54 75.9
PGR142G0948 Punica granatum HOM05D005173 ORTHO05D006214 2.1e-17 93.6 54 75.9
TAR636G1303 Trochodendron aralioides HOM05D005173 ORTHO05D006214 2.1e-17 93.6 54 74.1
AT5G20520 Arabidopsis thaliana HOM05D005173 ORTHO05D006214 2.8e-17 93.2 54 70.4
Rhsim05G0012900 Rhododendron simsii HOM05D005173 ORTHO05D006214 2.8e-17 93.2 47 85.1
CiPaw.03G210500 Carya illinoinensis HOM05D005173 ORTHO05D006214 3.6e-17 92.8 54 75.9
Sed0012764 Sechium edule HOM05D005173 ORTHO05D006214 3.6e-17 92.8 54 74.1
Aa31LG1G14140 Aethionema arabicum HOM05D005173 ORTHO05D006214 4.7e-17 92.4 54 72.2
Thhalv10014184m.g Eutrema salsugineum HOM05D005173 ORTHO05D006214 4.7e-17 92.4 54 70.4
Medtr4g125660 Medicago truncatula HOM05D005173 ORTHO05D006214 4.7e-17 92.4 54 75.9
EL10Ac8g19142 Beta vulgaris HOM05D005173 ORTHO05D006214 6.2e-17 92.0 54 74.1
Glyma.17G051500 Glycine max HOM05D005173 ORTHO05D006214 6.2e-17 92.0 54 74.1
Potri.018G064800 Populus trichocarpa HOM05D005173 ORTHO05D006214 6.2e-17 92.0 54 75.9
arahy.Tifrunner.gnm1.ann1.6AS4TW Arachis hypogaea HOM05D005173 ORTHO05D006214 8.1e-17 91.7 54 72.2
BolC9t58435H Brassica oleracea HOM05D005173 ORTHO05D006214 8.1e-17 91.7 54 72.2
Lj7C682G9 Lonicera japonica HOM05D005173 ORTHO05D006214 8.1e-17 91.7 47 80.9
Sp6g23940 Schrenkiella parvula HOM05D005173 ORTHO05D006214 8.1e-17 91.7 54 70.4
vmacro17173 Vaccinium macrocarpon HOM05D005173 ORTHO05D006214 8.1e-17 91.7 64 64.1
Aqoxy7G01101 Aquilegia oxysepala HOM05D005173 ORTHO05D006214 1.1e-16 91.3 54 70.4
arahy.Tifrunner.gnm1.ann1.9Y0BJI Arachis hypogaea HOM05D005173 ORTHO05D006214 1.1e-16 91.3 54 72.2
Duzib168G0179 Durio zibethinus HOM05D005173 ORTHO05D006214 1.1e-16 91.3 47 80.9
Hma1.2p1_0797F.1_g219350 Hydrangea macrophylla HOM05D005173 ORTHO05D006214 1.1e-16 91.3 54 74.1
Nitab4.5_0013150g0020 Nicotiana tabacum HOM05D005173 ORTHO05D006214 1.4e-16 90.9 47 80.9
Psat4g016960 Pisum sativum HOM05D005173 ORTHO05D006214 1.4e-16 90.9 54 75.9
BolC2t07046H Brassica oleracea HOM05D005173 ORTHO05D006214 1.8e-16 90.5 54 70.4
AUR62025172 Chenopodium quinoa HOM05D005173 ORTHO05D006214 1.8e-16 90.5 47 80.9
AUR62029004 Chenopodium quinoa HOM05D005173 ORTHO05D006214 1.8e-16 90.5 47 80.9
Glyma.13G107800 Glycine max HOM05D005173 ORTHO05D006214 1.8e-16 90.5 54 72.2
BcaB05g22843 Brassica carinata HOM05D005173 ORTHO05D006214 2.3e-16 90.1 54 72.2
BcaC03g13770 Brassica carinata HOM05D005173 ORTHO05D006214 2.3e-16 90.1 54 70.4
TWI63G0548 Tripterygium wilfordii HOM05D005173 ORTHO05D006214 2.3e-16 90.1 54 72.2
Actinidia25222 Actinidia chinensis HOM05D005173 ORTHO05D006214 3.1e-16 89.7 50 76.0
Haze_25966 Corylus avellana HOM05D005173 ORTHO05D006214 3.1e-16 89.7 47 76.6
HanXRQChr09g0237971 Helianthus annuus HOM05D005173 ORTHO05D006214 3.1e-16 89.7 54 70.4
Potri.006G145200 Populus trichocarpa HOM05D005173 ORTHO05D006214 3.1e-16 89.7 54 72.2
DCAR_024724 Daucus carota HOM05D005173 ORTHO05D006214 4.0e-16 89.4 54 72.2
DCAR_031940 Daucus carota HOM05D005173 ORTHO05D006214 4.0e-16 89.4 54 72.2
ATR0598G148 Amborella trichopoda HOM05D005173 ORTHO05D006214 5.2e-16 89.0 54 72.2
Peaxi162Scf00246g00045 Petunia axillaris HOM05D005173 ORTHO05D006214 5.2e-16 89.0 47 80.9
Ah.14g085040 Amaranthus hybridus HOM05D005173 ORTHO05D006214 6.8e-16 88.6 47 78.7
QL02p061251 Quercus lobata HOM05D005173 ORTHO05D006214 6.8e-16 88.6 54 72.2
Sed0013811 Sechium edule HOM05D005173 ORTHO05D006214 6.8e-16 88.6 54 72.2
Cc00_g19370 Coffea canephora HOM05D005173 ORTHO05D006214 8.9e-16 88.2 54 70.4
SalBow1G6961 Salvia bowleyana HOM05D005173 ORTHO05D006214 1.5e-15 87.4 47 78.7
TPR.G9429 Trifolium pratense HOM05D005173 ORTHO05D006214 1.5e-15 87.4 54 70.4
MSTRG.26457 Avicennia marina HOM05D005173 ORTHO05D006214 2.0e-15 87.0 54 68.5
HanXRQChr01g0007561 Helianthus annuus HOM05D005173 ORTHO05D006214 2.0e-15 87.0 54 68.5
Ca_21308_v3 Cicer arietinum L. HOM05D005173 ORTHO05D006214 2.6e-15 86.7 53 71.7
Sabra06G0114800 Salix brachista HOM05D005173 ORTHO05D006214 2.6e-15 86.7 54 70.4
Lsat_1_v5_gn_5_142000 Lactuca sativa HOM05D005173 ORTHO05D006214 3.4e-15 86.3 54 66.7
HPP92_009230 Vanilla planifolia HOM05D005173 ORTHO05D006214 4.4e-15 85.9 54 63.0
SGA_v2.0_scaffold21G09462 Striga asiatica HOM05D005173 ORTHO05D006214 9.8e-15 84.7 47 76.6
ECA234G3859 Erigeron canadensis HOM05D005173 ORTHO05D006214 1.7e-14 84.0 54 64.8
SHI33752 Sapria himalayana HOM05D005173 ORTHO05D006214 6.4e-14 82.0 54 66.7
DCAR_028284 Daucus carota HOM05D005173 ORTHO05D006214 1.1e-13 81.3 78 55.1
Lsat_1_v5_gn_7_34821 Lactuca sativa HOM05D005173 ORTHO05D006214 1.9e-13 80.5 54 64.8
Os07g0608300 Oryza sativa ssp. japonica HOM05D005173 ORTHO05D006214 2.4e-13 80.1 54 59.3
Zm00001eb108940 Zea mays HOM05D005173 ORTHO05D006214 1.2e-12 77.8 54 61.1
HPP92_006149 Vanilla planifolia HOM05D005173 ORTHO05D006214 2.1e-12 77.0 54 59.3
unitig_22.g5750 Utricularia gibba HOM05D005173 ORTHO05D006214 4.6e-12 75.9 80 51.2
Mapoly0002s0260 Marchantia polymorpha HOM05D005173 ORTHO05D006214 5.1e-11 72.4 54 53.7
CBR_g3819 Chara braunii HOM05D005173 ORTHO05D006214 1.9e-10 70.5 72 50.0
SMO203G0271 Selaginella moellendorffii HOM05D005173 ORTHO05D006214 1.9e-10 70.5 40 70.0
ClCG07G005020 Citrullus lanatus HOM05D005173 ORTHO05D006214 5.6e-10 68.9 43 72.1
Pp3c15_14310 Physcomitrium patens HOM05D005173 ORTHO05D006214 1.7e-06 57.4 54 42.6


User provided reference genes

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