Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039632 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 7.8e-222 773.5 386 100.0
Dinv10959 Davidia involucrata HOM05D003724 ORTHO05D004367 2.8e-155 552.4 319 85.3
Actinidia08073 Actinidia chinensis HOM05D003724 ORTHO05D004367 2.9e-152 542.3 319 86.5
Actinidia30650 Actinidia chinensis HOM05D003724 ORTHO05D004367 3.2e-151 538.9 317 86.1
Lj3C1068T3 Lonicera japonica HOM05D003724 ORTHO05D004367 3.2e-151 538.9 319 83.4
Thecc.02G209200 Theobroma cacao HOM05D003724 ORTHO05D004367 1.7e-147 526.6 319 82.4
Rhsim12G0026000 Rhododendron simsii HOM05D003724 ORTHO05D004367 2.2e-147 526.2 325 83.4
TWI75G0323 Tripterygium wilfordii HOM05D003724 ORTHO05D004367 3.7e-147 525.4 319 81.5
Migut.C00176 Erythranthe guttata HOM05D003724 ORTHO05D004367 1.8e-146 523.1 318 80.5
vmacro01062 Vaccinium macrocarpon HOM05D003724 ORTHO05D004367 9.1e-146 520.8 341 78.9
Manes.12G011600 Manihot esculenta HOM05D003724 ORTHO05D004367 2.0e-145 519.6 319 81.2
TAR374G1082 Trochodendron aralioides HOM05D003724 ORTHO05D004367 2.0e-145 519.6 319 81.8
Cpa.g.sc43.54 Carica papaya HOM05D003724 ORTHO05D004367 3.5e-145 518.8 328 80.5
CANSAT01G0850 Cannabis sativa HOM05D003724 ORTHO05D004367 1.5e-143 513.5 319 81.2
Gohir.A03G126400 Gossypium hirsutum HOM05D003724 ORTHO05D004367 7.2e-143 511.1 319 79.9
FvH4_4g23800 Fragaria vesca HOM05D003724 ORTHO05D004367 9.4e-143 510.8 328 79.9
FAN22G0779 Fragaria x ananassa HOM05D003724 ORTHO05D004367 1.2e-142 510.4 328 79.6
RcHm_v2.0_Chr4g0430341 Rosa chinensis HOM05D003724 ORTHO05D004367 1.2e-142 510.4 328 79.6
Atru.chr11.2319 Acer truncatum HOM05D003724 ORTHO05D004367 1.6e-142 510.0 320 81.6
Gorai.005G167400 Gossypium raimondii HOM05D003724 ORTHO05D004367 1.4e-141 506.9 319 79.0
PGR102G1478 Punica granatum HOM05D003724 ORTHO05D004367 1.4e-141 506.9 318 79.6
MD16G1118900 Malus domestica HOM05D003724 ORTHO05D004367 6.7e-141 504.6 327 78.9
Potri.003G173200 Populus trichocarpa HOM05D003724 ORTHO05D004367 6.7e-141 504.6 319 79.9
SGA_v2.0_scaffold9G04687 Striga asiatica HOM05D003724 ORTHO05D004367 8.8e-141 504.2 327 76.5
CAN.G804.4 Capsicum annuum HOM05D003724 ORTHO05D004367 2.0e-140 503.1 324 77.8
THA.LOC104825509 Tarenaya hassleriana HOM05D003724 ORTHO05D004367 3.3e-140 502.3 319 78.4
arahy.Tifrunner.gnm1.ann1.3XH1N1 Arachis hypogaea HOM05D003724 ORTHO05D004367 4.4e-140 501.9 319 77.7
TPR.G28283 Trifolium pratense HOM05D003724 ORTHO05D004367 9.7e-140 500.7 322 76.4
RcHm_v2.0_Chr4g0430291 Rosa chinensis HOM05D003724 ORTHO05D004367 1.7e-139 500.0 328 78.7
Sed0021729 Sechium edule HOM05D003724 ORTHO05D004367 1.7e-139 500.0 319 79.0
CiPaw.05G110100 Carya illinoinensis HOM05D003724 ORTHO05D004367 2.8e-139 499.2 321 79.1
Peaxi162Scf00128g01233 Petunia axillaris HOM05D003724 ORTHO05D004367 2.8e-139 499.2 343 74.9
Nitab4.5_0003981g0060 Nicotiana tabacum HOM05D003724 ORTHO05D004367 6.3e-139 498.0 324 77.2
Lsat_1_v5_gn_8_147680 Lactuca sativa HOM05D003724 ORTHO05D004367 3.1e-138 495.7 323 76.8
VMungo1383G3407 Vigna mungo HOM05D003724 ORTHO05D004367 3.1e-138 495.7 321 76.6
CsaV3_2G025450 Cucumis sativus L. HOM05D003724 ORTHO05D004367 4.1e-138 495.4 321 78.8
Oeu036873.1 Olea europaea HOM05D003724 ORTHO05D004367 5.3e-138 495.0 319 78.7
Glyma.18G006800 Glycine max HOM05D003724 ORTHO05D004367 1.2e-137 493.8 319 77.4
Medtr3g085380 Medicago truncatula HOM05D003724 ORTHO05D004367 1.2e-137 493.8 321 76.9
MELO3C010743.2 Cucumis melo HOM05D003724 ORTHO05D004367 1.6e-137 493.4 319 78.7
FAN17G0970 Fragaria x ananassa HOM05D003724 ORTHO05D004367 1.6e-137 493.4 357 73.1
Solyc04g007330.3 Solanum lycopersicum HOM05D003724 ORTHO05D004367 2.7e-137 492.7 318 78.3
Nitab4.5_0002441g0080 Nicotiana tabacum HOM05D003724 ORTHO05D004367 7.7e-137 491.1 357 71.7
Lj1g0008936 Lotus japonicus HOM05D003724 ORTHO05D004367 1.0e-136 490.7 319 78.1
SalBow2G1610 Salvia bowleyana HOM05D003724 ORTHO05D004367 1.0e-136 490.7 318 76.4
Migut.K00732 Erythranthe guttata HOM05D003724 ORTHO05D004367 3.8e-136 488.8 319 76.5
Lj1g0003468 Lotus japonicus HOM05D003724 ORTHO05D004367 1.1e-135 487.3 319 78.1
Aqoxy5G02771 Aquilegia oxysepala HOM05D003724 ORTHO05D004367 1.9e-135 486.5 320 76.9
QL03p052803 Quercus lobata HOM05D003724 ORTHO05D004367 2.5e-135 486.1 319 76.5
Aa31sc377G30 Aethionema arabicum HOM05D003724 ORTHO05D004367 1.6e-134 483.4 317 77.0
Thhalv10018311m.g Eutrema salsugineum HOM05D003724 ORTHO05D004367 1.6e-134 483.4 320 76.6
MD13G1118700 Malus domestica HOM05D003724 ORTHO05D004367 1.6e-134 483.4 329 76.6
Lalb_Chr01g0009271 Lupinus albus HOM05D003724 ORTHO05D004367 3.6e-134 482.3 318 75.2
Oeu060814.1 Olea europaea HOM05D003724 ORTHO05D004367 3.6e-134 482.3 317 77.3
Psat5g096280 Pisum sativum HOM05D003724 ORTHO05D004367 3.6e-134 482.3 319 75.5
Sopen04g002390 Solanum pennellii HOM05D003724 ORTHO05D004367 3.6e-134 482.3 318 77.0
Sp5g22320 Schrenkiella parvula HOM05D003724 ORTHO05D004367 4.7e-134 481.9 319 76.8
Prupe.1G226200 Prunus persica HOM05D003724 ORTHO05D004367 6.1e-134 481.5 327 76.8
PSO339G4917 Papaver somniferum HOM05D003724 ORTHO05D004367 1.4e-133 480.3 323 75.9
Potri.001G055201 Populus trichocarpa HOM05D003724 ORTHO05D004367 1.5e-132 476.9 319 77.1
PSO478G4090 Papaver somniferum HOM05D003724 ORTHO05D004367 3.4e-132 475.7 323 75.2
PSO478G5007 Papaver somniferum HOM05D003724 ORTHO05D004367 3.4e-132 475.7 323 75.2
Aqoxy7G01914 Aquilegia oxysepala HOM05D003724 ORTHO05D004367 5.7e-132 474.9 320 75.6
AL2G25920 Arabidopsis lyrata HOM05D003724 ORTHO05D004367 9.8e-132 474.2 321 75.1
Lalb_Chr03g0034531 Lupinus albus HOM05D003724 ORTHO05D004367 1.3e-131 473.8 328 72.6
Hund06087 Selenicereus undatus HOM05D003724 ORTHO05D004367 2.2e-131 473.0 360 68.6
ECA233G0767 Erigeron canadensis HOM05D003724 ORTHO05D004367 3.7e-131 472.2 319 75.5
CARHR059910 Cardamine hirsuta HOM05D003724 ORTHO05D004367 1.1e-130 470.7 321 74.5
PSO782G3500 Papaver somniferum HOM05D003724 ORTHO05D004367 1.4e-130 470.3 323 74.0
HanXRQChr08g0207781 Helianthus annuus HOM05D003724 ORTHO05D004367 1.8e-130 469.9 319 75.2
PSO782G1352 Papaver somniferum HOM05D003724 ORTHO05D004367 7.0e-130 468.0 323 74.3
Haze_12416 Corylus avellana HOM05D003724 ORTHO05D004367 9.1e-130 467.6 327 73.7
PSO384G3745 Papaver somniferum HOM05D003724 ORTHO05D004367 9.1e-130 467.6 323 74.3
BcaB03g15202 Brassica carinata HOM05D003724 ORTHO05D004367 5.5e-127 458.4 319 73.0
A07p33960 Brassica napus HOM05D003724 ORTHO05D004367 9.5e-127 457.6 319 72.1
AT1G67370 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 2.8e-126 456.1 321 72.9
BraA07t31023Z Brassica rapa HOM05D003724 ORTHO05D004367 6.1e-126 454.9 318 72.0
BolC6t39148H Brassica oleracea HOM05D003724 ORTHO05D004367 1.0e-125 454.1 319 71.8
CDE05G2922 Ceratophyllum demersum HOM05D003724 ORTHO05D004367 1.4e-125 453.8 320 73.8
C06p42900 Brassica napus HOM05D003724 ORTHO05D004367 6.8e-125 451.4 319 71.5
TAR622G1117 Trochodendron aralioides HOM05D003724 ORTHO05D004367 1.2e-124 450.7 347 70.0
BcaC08g46167 Brassica carinata HOM05D003724 ORTHO05D004367 3.4e-124 449.1 319 71.5
Gohir.D02G149500 Gossypium hirsutum HOM05D003724 ORTHO05D004367 1.3e-123 447.2 324 71.9
Sabra03G0126700 Salix brachista HOM05D003724 ORTHO05D004367 4.9e-123 445.3 319 71.8
Ciclev10033677m.g Citrus clementina HOM05D003724 ORTHO05D004367 8.3e-123 444.5 320 74.4
Ca_16461_v3 Cicer arietinum L. HOM05D003724 ORTHO05D004367 9.2e-122 441.0 319 70.8
ATR0561G244 Amborella trichopoda HOM05D003724 ORTHO05D004367 7.8e-121 438.0 326 71.2
ClCG08G017130 Citrullus lanatus HOM05D003724 ORTHO05D004367 1.0e-120 437.6 319 72.1
Sc04g0010100 Simmondsia chinensis HOM05D003724 ORTHO05D004367 9.5e-119 431.0 286 75.5
Sabra01G0039800 Salix brachista HOM05D003724 ORTHO05D004367 2.1e-118 429.9 349 66.5
HPP92_003196 Vanilla planifolia HOM05D003724 ORTHO05D004367 1.0e-117 427.6 320 68.1
PGSC0003DMG400029108 Solanum tuberosum HOM05D003724 ORTHO05D004367 1.4e-117 427.2 285 75.4
MBI06_g46773_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 3.4e-116 422.5 321 68.5
Nitab4.5_0003884g0070 Nicotiana tabacum HOM05D003724 ORTHO05D004367 7.5e-116 421.4 314 69.4
AUR62021613 Chenopodium quinoa HOM05D003724 ORTHO05D004367 2.2e-115 419.9 321 67.3
Nn3g16465 Nelumbo nucifera HOM05D003724 ORTHO05D004367 3.7e-115 419.1 319 69.0
CSS0007637 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 4.1e-114 415.6 291 76.6
arahy.Tifrunner.gnm1.ann1.QLFJ9Y Arachis hypogaea HOM05D003724 ORTHO05D004367 2.7e-113 412.9 319 67.1
Carub.0002s1366 Capsella rubella HOM05D003724 ORTHO05D004367 2.7e-113 412.9 288 72.2
Os09g0506800 Oryza sativa ssp. japonica HOM05D003724 ORTHO05D004367 6.6e-112 408.3 317 67.8
Zm00001eb102420 Zea mays HOM05D003724 ORTHO05D004367 1.6e-110 403.7 318 65.1
EL10Ac6g13492 Beta vulgaris HOM05D003724 ORTHO05D004367 4.7e-110 402.1 319 66.1
Nitab4.5_0002699g0070 Nicotiana tabacum HOM05D003724 ORTHO05D004367 1.5e-108 397.1 310 67.4
GSVIVG01010479001 Vitis vinifera HOM05D003724 ORTHO05D004367 2.0e-108 396.7 249 79.9
AUR62008480 Chenopodium quinoa HOM05D003724 ORTHO05D004367 3.4e-108 396.0 337 62.6
Sed0012468 Sechium edule HOM05D003724 ORTHO05D004367 1.0e-104 384.4 286 69.2
Ah.01g020690 Amaranthus hybridus HOM05D003724 ORTHO05D004367 8.9e-101 371.3 327 62.1
MBI06_g20299_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 5.8e-100 368.6 359 58.8
Cc09_g04930 Coffea canephora HOM05D003724 ORTHO05D004367 4.9e-99 365.5 275 68.4
PSO339G0549 Papaver somniferum HOM05D003724 ORTHO05D004367 7.1e-98 361.7 248 73.8
RcHm_v2.0_Chr4g0430321 Rosa chinensis HOM05D003724 ORTHO05D004367 2.3e-96 356.7 248 74.2
C06p38720 Brassica napus HOM05D003724 ORTHO05D004367 3.9e-88 329.3 319 56.4
FAN12G2603 Fragaria x ananassa HOM05D003724 ORTHO05D004367 4.0e-85 319.3 257 70.0
CARHR058050 Cardamine hirsuta HOM05D003724 ORTHO05D004367 3.4e-84 316.2 263 64.6
MBI06_g32743_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 2.2e-83 313.5 321 56.4
PSO339G0625 Papaver somniferum HOM05D003724 ORTHO05D004367 3.2e-82 309.7 348 51.1
SHI17968 Sapria himalayana HOM05D003724 ORTHO05D004367 7.1e-82 308.5 242 67.4
AagrBONN_evm.TU.Sc2ySwM_368.2626 Anthoceros agrestis HOM05D003724 ORTHO05D004367 9.3e-82 308.1 339 51.3
Glyma.11G250400 Glycine max HOM05D003724 ORTHO05D004367 2.1e-81 307.0 240 65.8
DCAR_026466 Daucus carota HOM05D003724 ORTHO05D004367 2.0e-76 290.4 176 84.7
AL1G56910 Arabidopsis lyrata HOM05D003724 ORTHO05D004367 7.6e-76 288.5 326 54.0
CBR_g17956 Chara braunii HOM05D003724 ORTHO05D004367 2.3e-72 276.9 224 62.5
unitig_8.g3138 Utricularia gibba HOM05D003724 ORTHO05D004367 9.6e-71 271.6 243 58.0
Mapoly0003s0194 Marchantia polymorpha HOM05D003724 ORTHO05D004367 6.9e-69 265.4 329 46.8
SMO116G0148 Selaginella moellendorffii HOM05D003724 ORTHO05D004367 3.8e-67 259.6 224 58.0
Solyc05g015370.3 Solanum lycopersicum HOM05D003724 ORTHO05D004367 1.2e-60 238.0 208 62.0
AT4G32200 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 2.0e-60 237.3 334 47.0
PSO170G4962 Papaver somniferum HOM05D003724 ORTHO05D004367 1.1e-58 231.5 189 65.6
FAN24G3534 Fragaria x ananassa HOM05D003724 ORTHO05D004367 7.1e-58 228.8 225 56.9
Os12g0606600 Oryza sativa ssp. japonica HOM05D003724 ORTHO05D004367 1.2e-49 201.4 254 48.4
Pp3c5_4780 Physcomitrium patens HOM05D003724 ORTHO05D004367 2.4e-45 187.2 431 33.4
PSO832G0175 Papaver somniferum HOM05D003724 ORTHO05D004367 1.5e-44 184.5 119 78.2
COL.COLO4_20398 Corchorus olitorius HOM05D003724 ORTHO05D004367 1.1e-42 178.3 126 73.0
COL.COLO4_20397 Corchorus olitorius HOM05D003724 ORTHO05D004367 2.4e-37 160.6 129 66.7
Sopen05g010640 Solanum pennellii HOM05D003724 ORTHO05D004367 9.1e-37 158.7 86 89.5
Cre10.g452550 Chlamydomonas reinhardtii HOM05D003724 ORTHO05D004367 1.2e-36 158.3 251 40.2
Nitab4.5_0002119g0030 Nicotiana tabacum HOM05D003724 ORTHO05D004367 1.7e-35 154.5 236 41.5
Hma1.2p1_0200F.1_g085970 Hydrangea macrophylla HOM05D003724 ORTHO05D004367 7.2e-34 149.1 326 32.8
Solyc05g015360.2 Solanum lycopersicum HOM05D003724 ORTHO05D004367 9.4e-34 148.7 82 86.6
Nitab4.5_0000767g0030 Nicotiana tabacum HOM05D003724 ORTHO05D004367 2.6e-28 130.6 142 50.7
vmacro18929 Vaccinium macrocarpon HOM05D003724 ORTHO05D004367 1.1e-26 125.2 153 45.8
Lsat_1_v5_gn_3_110541 Lactuca sativa HOM05D003724 ORTHO05D004367 1.2e-25 121.7 120 55.0
Hma1.2p1_0053F.1_g030850 Hydrangea macrophylla HOM05D003724 ORTHO05D004367 1.6e-25 121.3 316 30.4
TPR.G40282 Trifolium pratense HOM05D003724 ORTHO05D004367 1.0e-24 118.6 122 52.5
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 2.0e-23 114.4 264 34.5
GSVIVG01010478001 Vitis vinifera HOM05D003724 ORTHO05D004367 4.4e-23 113.2 56 98.2
RcHm_v2.0_Chr4g0430331 Rosa chinensis HOM05D003724 ORTHO05D004367 2.2e-22 110.9 55 98.2
SHI17966 Sapria himalayana HOM05D003724 ORTHO05D004367 2.8e-22 110.5 98 61.2
Glyma.11G250351 Glycine max HOM05D003724 ORTHO05D004367 1.1e-21 108.6 61 88.5
Os01g0165800 Oryza sativa ssp. japonica HOM05D020709 ORTHO05D004367 1.2e-20 105.1 113 44.2
PRCOL_00002813 Prasinoderma coloniale HOM05D003724 ORTHO05D004367 5.9e-20 102.8 240 31.2
PSO063G4593 Papaver somniferum HOM05D003724 ORTHO05D004367 3.2e-18 97.1 77 63.6
PSO561G0043 Papaver somniferum HOM05D003724 ORTHO05D004367 8.6e-11 72.4 93 49.5
Ca_24313_v3 Cicer arietinum L. HOM05D000703 ORTHO05D004367 2.8e-09 67.4 105 41.9
PSO782G0388 Papaver somniferum HOM05D003724 ORTHO05D004367 1.8e-08 64.7 45 66.7
Lj3g0010411 Lotus japonicus HOM05D003724 ORTHO05D004367 4.4e-07 60.1 86 44.2
Rhsim02G0239300 Rhododendron simsii HOM05D003724 ORTHO05D004367 1.3e-06 58.5 37 70.3
SHI18623 Sapria himalayana HOM05D003724 ORTHO05D004367 1.7e-06 58.2 46 56.5
Sopen05g010660 Solanum pennellii HOM05D003724 ORTHO05D004367 1.7e-06 58.2 55 61.8
vmacro05008 Vaccinium macrocarpon HOM05D000208 ORTHO05D426771 2.8e-06 57.4 75 44.0


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