Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039611 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 6.2e-202 707.2 347 100.0
CSS0000091 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 2.3e-148 529.3 311 86.5
Rhsim09G0141700 Rhododendron simsii HOM05D005598 ORTHO05D006587 6.5e-135 484.6 311 78.8
TAR636G1340 Trochodendron aralioides HOM05D005598 ORTHO05D006587 1.4e-134 483.4 311 78.8
vmacro10312 Vaccinium macrocarpon HOM05D005598 ORTHO05D006587 2.0e-131 473.0 309 77.3
Lj2C33T4 Lonicera japonica HOM05D005598 ORTHO05D006587 2.2e-130 469.5 311 76.8
Nn6g34854 Nelumbo nucifera HOM05D005598 ORTHO05D006587 4.8e-130 468.4 309 77.3
QL04p046731 Quercus lobata HOM05D005598 ORTHO05D006587 4.8e-130 468.4 305 77.0
Haze_03295 Corylus avellana HOM05D005598 ORTHO05D006587 2.0e-128 463.0 323 74.3
CiPaw.13G040600 Carya illinoinensis HOM05D005598 ORTHO05D006587 2.6e-128 462.6 310 74.2
Cc02_g09610 Coffea canephora HOM05D005598 ORTHO05D006587 2.6e-128 462.6 311 75.9
GSVIVG01010722001 Vitis vinifera HOM05D005598 ORTHO05D006587 7.7e-128 461.1 311 75.2
HanXRQChr11g0342091 Helianthus annuus HOM05D005598 ORTHO05D006587 7.2e-126 454.5 311 73.6
MELO3C017716.2 Cucumis melo HOM05D005598 ORTHO05D006587 2.1e-125 453.0 311 74.3
CsaV3_4G003460 Cucumis sativus L. HOM05D005598 ORTHO05D006587 2.1e-125 453.0 311 74.3
Duzib128G1802 Durio zibethinus HOM05D005598 ORTHO05D006587 2.1e-125 453.0 311 73.6
Potri.008G019800 Populus trichocarpa HOM05D005598 ORTHO05D006587 8.0e-125 451.1 311 75.2
MD02G1261600 Malus domestica HOM05D005598 ORTHO05D006587 3.0e-124 449.1 308 73.1
DCAR_006354 Daucus carota HOM05D005598 ORTHO05D006587 3.9e-124 448.7 311 73.0
Gohir.A05G287700 Gossypium hirsutum HOM05D005598 ORTHO05D006587 3.9e-124 448.7 312 73.4
Gohir.D05G288900 Gossypium hirsutum HOM05D005598 ORTHO05D006587 5.2e-124 448.4 312 73.7
PGR142G4231 Punica granatum HOM05D005598 ORTHO05D006587 1.1e-123 447.2 315 72.7
TWI38G0756 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 1.5e-123 446.8 311 74.0
Gorai.009G304000 Gossypium raimondii HOM05D005598 ORTHO05D006587 2.6e-123 446.0 312 73.4
Thecc.10G109100 Theobroma cacao HOM05D005598 ORTHO05D006587 3.3e-123 445.7 308 73.7
Sed0022725 Sechium edule HOM05D005598 ORTHO05D006587 4.4e-123 445.3 306 72.9
Aqoxy4G02744 Aquilegia oxysepala HOM05D005598 ORTHO05D006587 5.7e-123 444.9 305 72.5
Hund06785 Selenicereus undatus HOM05D005598 ORTHO05D006587 7.4e-123 444.5 306 73.5
PSO339G6152 Papaver somniferum HOM05D005598 ORTHO05D006587 1.3e-122 443.7 306 72.9
Sabra08G0013100 Salix brachista HOM05D005598 ORTHO05D006587 1.3e-122 443.7 306 74.8
Atru.chr12.1043 Acer truncatum HOM05D005598 ORTHO05D006587 1.7e-122 443.4 309 71.2
Lsat_1_v5_gn_2_104400 Lactuca sativa HOM05D005598 ORTHO05D006587 2.8e-122 442.6 309 70.6
Eucgr.G02689 Eucalyptus grandis HOM05D005598 ORTHO05D006587 3.7e-122 442.2 311 72.0
RcHm_v2.0_Chr5g0049931 Rosa chinensis HOM05D005598 ORTHO05D006587 3.7e-122 442.2 311 71.7
arahy.Tifrunner.gnm1.ann1.L8YGTT Arachis hypogaea HOM05D005598 ORTHO05D006587 4.8e-122 441.8 313 70.6
MSTRG.23901 Avicennia marina HOM05D005598 ORTHO05D006587 4.8e-122 441.8 313 71.9
Oeu024809.1 Olea europaea HOM05D005598 ORTHO05D006587 8.2e-122 441.0 344 66.9
ClCG07G015650 Citrullus lanatus HOM05D005598 ORTHO05D006587 1.1e-121 440.7 342 67.3
arahy.Tifrunner.gnm1.ann1.8DLZ0X Arachis hypogaea HOM05D005598 ORTHO05D006587 1.4e-121 440.3 312 69.6
Ciclev10016103m.g Citrus clementina HOM05D005598 ORTHO05D006587 1.8e-121 439.9 311 69.5
Nitab4.5_0003590g0030 Nicotiana tabacum HOM05D005598 ORTHO05D006587 2.4e-121 439.5 311 71.4
Sopen11g002760 Solanum pennellii HOM05D005598 ORTHO05D006587 5.3e-121 438.3 311 70.7
CDE08G1414 Ceratophyllum demersum HOM05D005598 ORTHO05D006587 9.1e-121 437.6 304 71.4
Migut.F01603 Erythranthe guttata HOM05D005598 ORTHO05D006587 1.2e-120 437.2 311 71.4
Solyc11g006860.2 Solanum lycopersicum HOM05D005598 ORTHO05D006587 1.2e-120 437.2 311 70.7
Lj5g0018811 Lotus japonicus HOM05D005598 ORTHO05D006587 1.6e-120 436.8 311 71.7
EL10Ac4g08688 Beta vulgaris HOM05D005598 ORTHO05D006587 2.0e-120 436.4 306 71.6
Peaxi162Scf00173g00110 Petunia axillaris HOM05D005598 ORTHO05D006587 3.5e-120 435.6 311 70.4
PGSC0003DMG400023970 Solanum tuberosum HOM05D005598 ORTHO05D006587 3.5e-120 435.6 311 70.4
AUR62042081 Chenopodium quinoa HOM05D005598 ORTHO05D006587 4.5e-120 435.3 305 71.5
Sc09g0005330 Simmondsia chinensis HOM05D005598 ORTHO05D006587 5.9e-120 434.9 311 70.1
ATR0820G296 Amborella trichopoda HOM05D005598 ORTHO05D006587 3.8e-119 432.2 303 71.0
SalBow6G5745 Salvia bowleyana HOM05D005598 ORTHO05D006587 1.1e-118 430.6 315 70.8
CANSAT56G2222 Cannabis sativa HOM05D005598 ORTHO05D006587 1.5e-118 430.3 311 70.4
CAN.G645.19 Capsicum annuum HOM05D005598 ORTHO05D006587 1.5e-118 430.3 311 69.8
Medtr1g111980 Medicago truncatula HOM05D005598 ORTHO05D006587 1.5e-118 430.3 312 69.2
Phvul.007G022800 Phaseolus vulgaris HOM05D005598 ORTHO05D006587 2.5e-118 429.5 314 70.4
FAN11G2626 Fragaria x ananassa HOM05D005598 ORTHO05D006587 3.2e-118 429.1 311 70.1
Lalb_Chr02g0146251 Lupinus albus HOM05D005598 ORTHO05D006587 4.2e-118 428.7 314 70.1
Ca_25662_v3 Cicer arietinum L. HOM05D005598 ORTHO05D006587 5.5e-118 428.3 312 69.9
THA.LOC104824207 Tarenaya hassleriana HOM05D005598 ORTHO05D006587 7.2e-118 427.9 305 70.5
TPR.G2473 Trifolium pratense HOM05D005598 ORTHO05D006587 7.2e-118 427.9 311 69.1
Dinv11826 Davidia involucrata HOM05D005598 ORTHO05D006587 2.1e-117 426.4 281 79.0
FvH4_3g27560 Fragaria vesca HOM05D005598 ORTHO05D006587 2.7e-117 426.0 311 69.8
VMungo0720G0111 Vigna mungo HOM05D005598 ORTHO05D006587 4.7e-117 425.2 313 69.3
COL.COLO4_38547 Corchorus olitorius HOM05D005598 ORTHO05D006587 6.1e-117 424.9 297 72.1
ECA238G1649 Erigeron canadensis HOM05D005598 ORTHO05D006587 8.0e-117 424.5 304 70.4
FAN16G3025 Fragaria x ananassa HOM05D005598 ORTHO05D006587 8.0e-117 424.5 311 69.5
HPP92_000055 Vanilla planifolia HOM05D005598 ORTHO05D006587 6.8e-116 421.4 303 69.6
Manes.10G062100 Manihot esculenta HOM05D005598 ORTHO05D006587 4.4e-115 418.7 289 73.7
Actinidia34728 Actinidia chinensis HOM05D005598 ORTHO05D006587 1.3e-114 417.2 265 78.5
A04p19500 Brassica napus HOM05D005598 ORTHO05D006587 6.3e-114 414.8 304 67.4
BraA04t17544Z Brassica rapa HOM05D005598 ORTHO05D006587 1.1e-113 414.1 304 67.4
Sp4g04110 Schrenkiella parvula HOM05D005598 ORTHO05D006587 1.4e-113 413.7 311 66.6
BcaB06g28035 Brassica carinata HOM05D005598 ORTHO05D006587 1.8e-113 413.3 304 67.4
BcaC02g08374 Brassica carinata HOM05D005598 ORTHO05D006587 1.8e-113 413.3 304 67.1
C04p55060 Brassica napus HOM05D005598 ORTHO05D006587 1.8e-113 413.3 304 67.1
BolC4t27046H Brassica oleracea HOM05D005598 ORTHO05D006587 1.8e-113 413.3 304 67.1
Carub.0004s0468 Capsella rubella HOM05D005598 ORTHO05D006587 2.4e-113 412.9 311 65.3
Nitab4.5_0002586g0090 Nicotiana tabacum HOM05D005598 ORTHO05D006587 4.1e-113 412.1 346 63.6
Aa31LG7G12150 Aethionema arabicum HOM05D005598 ORTHO05D006587 3.8e-111 405.6 304 66.4
Dinv10930 Davidia involucrata HOM05D005598 ORTHO05D006587 3.8e-111 405.6 255 79.2
AT2G25100 Arabidopsis thaliana HOM05D005598 ORTHO05D006587 6.5e-111 404.8 311 63.7
CARHR116600 Cardamine hirsuta HOM05D005598 ORTHO05D006587 6.5e-111 404.8 311 64.3
Os11g0153900 Oryza sativa ssp. japonica HOM05D005598 ORTHO05D006587 6.5e-111 404.8 302 66.2
TWI63G1098 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 6.8e-108 394.8 310 67.7
SGA_v2.0_scaffold62G21319 Striga asiatica HOM05D005598 ORTHO05D006587 8.8e-108 394.4 334 63.2
SEGI_12354 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 7.7e-104 381.3 303 62.0
PSO801G0206 Papaver somniferum HOM05D005598 ORTHO05D006587 1.0e-103 380.9 248 75.0
Prupe.2G069600 Prunus persica HOM05D005598 ORTHO05D006587 1.3e-103 380.6 253 73.5
Glyma.10G278500 Glycine max HOM05D005598 ORTHO05D006587 2.5e-102 376.3 284 69.0
unitig_736.g22318 Utricularia gibba HOM05D005598 ORTHO05D006587 4.4e-99 365.5 306 61.8
Thhalv10000575m.g Eutrema salsugineum HOM05D005598 ORTHO05D006587 7.5e-99 364.8 304 60.9
Zm00001eb406890 Zea mays HOM05D005598 ORTHO05D006587 3.7e-98 362.5 278 64.7
MBI01_g02157_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 7.0e-97 358.2 259 71.8
Cpa.g.c34135 Carica papaya HOM05D005598 ORTHO05D006587 1.5e-94 350.5 238 73.1
Psat0s4121g0080 Pisum sativum HOM05D005598 ORTHO05D006587 4.9e-90 335.5 254 66.9
Mapoly0006s0052 Marchantia polymorpha HOM05D005598 ORTHO05D006587 1.3e-79 300.8 306 51.0
Pp3c13_7860 Physcomitrium patens HOM05D005598 ORTHO05D006587 1.3e-79 300.8 257 57.6
AagrBONN_evm.TU.Sc2ySwM_362.477 Anthoceros agrestis HOM05D005598 ORTHO05D006587 5.6e-78 295.4 306 50.0
DCAR_006363 Daucus carota HOM05D005598 ORTHO05D006587 1.5e-75 287.3 295 58.6
AUR62041514 Chenopodium quinoa HOM05D005598 ORTHO05D006587 1.1e-73 281.2 401 43.6
AL4G16260 Arabidopsis lyrata HOM05D005598 ORTHO05D006587 3.0e-71 273.1 205 64.4
SMO347G0320 Selaginella moellendorffii HOM05D005598 ORTHO05D006587 1.6e-56 224.2 262 47.3
CiPaw.14G033400 Carya illinoinensis HOM05D005598 ORTHO05D006587 3.5e-56 223.0 265 53.6
Ah.04g160180 Amaranthus hybridus HOM05D005598 ORTHO05D006587 2.2e-50 203.8 135 77.0
Lalb_Chr21g0309151 Lupinus albus HOM05D005598 ORTHO05D006587 1.5e-46 191.0 169 62.1
Cre17.g701350 Chlamydomonas reinhardtii HOM05D005598 ORTHO05D006587 7.4e-46 188.7 308 35.1
Psat4g059000 Pisum sativum HOM05D005598 ORTHO05D006587 4.5e-43 179.5 117 68.4
Haze_26455 Corylus avellana HOM05D005598 ORTHO05D006587 5.8e-43 179.1 256 39.1
CBR_g29781 Chara braunii HOM05D005598 ORTHO05D006587 1.9e-38 164.1 208 46.2
Glyma.07G162800 Glycine max HOM05D005598 ORTHO05D006587 1.9e-38 164.1 137 62.0
MD02G1261400 Malus domestica HOM05D005598 ORTHO05D006587 5.3e-36 156.0 182 51.6
HanXRQChr05g0158341 Helianthus annuus HOM05D005598 ORTHO05D006587 7.9e-32 142.1 102 64.7
Cfa026153 Carpinus fangiana HOM05D005598 ORTHO05D006587 1.4e-28 131.3 247 33.6
Psat0s449g0080 Pisum sativum HOM05D000909 ORTHO05D000928 2.9e-26 123.6 73 78.1
Zm00001eb407010 Zea mays HOM05D005598 ORTHO05D006587 2.6e-19 100.5 82 64.6
Lsat_1_v5_gn_9_94660 Lactuca sativa HOM05D005598 ORTHO05D006587 5.9e-19 99.4 65 75.4
Psat0s1058g0040 Pisum sativum HOM05D005598 ORTHO05D006587 1.0e-18 98.6 52 88.5
MBI01_g19134_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 3.2e-17 93.6 49 87.8
SEGI_12669 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 5.5e-17 92.8 47 85.1
Psat5g185320 Pisum sativum HOM05D000559 ORTHO05D006587 1.6e-16 91.3 137 41.6
Psat4g071240 Pisum sativum HOM05D005598 ORTHO05D006587 5.1e-15 86.3 197 32.5
Psat5g299440 Pisum sativum HOM05D005598 ORTHO05D006587 4.4e-14 83.2 112 42.9
Lalb_Chr21g0309141 Lupinus albus HOM05D005598 ORTHO05D006587 7.0e-12 75.9 54 70.4
Sabra10G0187600 Salix brachista HOM05D005598 ORTHO05D006587 7.0e-12 75.9 51 64.7
Lalb_Chr21g0309161 Lupinus albus HOM05D005598 ORTHO05D006587 8.5e-10 68.9 63 57.1
Actinidia27053 Actinidia chinensis HOM05D005215 ORTHO05D006382 2.7e-08 63.9 52 67.3
BolC8t51460H Brassica oleracea HOM05D005598 ORTHO05D041141 2.3e-07 60.8 42 71.4
Psat7g021760 Pisum sativum HOM05D000559 ORTHO05D000596 2.0e-06 57.8 26 88.5


User provided reference genes

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