Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037173 Camellia sinensis var. sinensis HOM05D004464 ORTHO05D005135 1.8e-99 365.9 183 100.0
CSS0016516 Camellia sinensis var. sinensis HOM05D004464 ORTHO05D005135 2.3e-99 365.5 183 99.5
Dinv33871 Davidia involucrata HOM05D004464 ORTHO05D005135 5.4e-88 327.8 183 87.4
Actinidia26272 Actinidia chinensis HOM05D004464 ORTHO05D005135 5.9e-87 324.3 183 85.8
Dinv34904 Davidia involucrata HOM05D004464 ORTHO05D005135 5.9e-87 324.3 183 86.9
Hma1.2p1_1837F.1_g304810 Hydrangea macrophylla HOM05D004464 ORTHO05D005135 1.3e-86 323.2 183 86.3
Actinidia17608 Actinidia chinensis HOM05D004464 ORTHO05D005135 6.5e-86 320.9 183 84.7
Ciclev10012892m.g Citrus clementina HOM05D004464 ORTHO05D005135 1.1e-85 320.1 183 85.8
Eucgr.J01412 Eucalyptus grandis HOM05D004464 ORTHO05D005135 1.5e-85 319.7 182 85.7
Sabra17G0087000 Salix brachista HOM05D004464 ORTHO05D005135 1.5e-85 319.7 183 83.6
SalBow1G0807 Salvia bowleyana HOM05D004464 ORTHO05D005135 2.5e-85 318.9 183 85.2
SGA_v2.0_scaffold148G36455 Striga asiatica HOM05D004464 ORTHO05D005135 4.2e-85 318.2 183 84.7
Potri.017G101200 Populus trichocarpa HOM05D004464 ORTHO05D005135 5.5e-85 317.8 183 83.6
MSTRG.15432 Avicennia marina HOM05D004464 ORTHO05D005135 7.2e-85 317.4 183 85.8
Duzib150G0689 Durio zibethinus HOM05D004464 ORTHO05D005135 7.2e-85 317.4 183 85.8
Migut.K00882 Erythranthe guttata HOM05D004464 ORTHO05D005135 7.2e-85 317.4 181 85.1
HanXRQChr15g0490131 Helianthus annuus HOM05D004464 ORTHO05D005135 7.2e-85 317.4 181 84.5
Nn4g23543 Nelumbo nucifera HOM05D004464 ORTHO05D005135 9.5e-85 317.0 183 84.7
PGR042G1328 Punica granatum HOM05D004464 ORTHO05D005135 9.5e-85 317.0 183 84.2
Atru.chr12.814 Acer truncatum HOM05D004464 ORTHO05D005135 1.2e-84 316.6 183 83.6
Gohir.D05G003500 Gossypium hirsutum HOM05D004464 ORTHO05D005135 2.8e-84 315.5 183 84.2
Gorai.009G003100 Gossypium raimondii HOM05D004464 ORTHO05D005135 2.8e-84 315.5 183 84.2
Potri.004G113600 Populus trichocarpa HOM05D004464 ORTHO05D005135 2.8e-84 315.5 183 82.5
TAR371G0146 Trochodendron aralioides HOM05D004464 ORTHO05D005135 3.6e-84 315.1 183 82.5
GSVIVG01036537001 Vitis vinifera HOM05D004464 ORTHO05D005135 3.6e-84 315.1 183 83.6
Gohir.A05G003100 Gossypium hirsutum HOM05D004464 ORTHO05D005135 4.7e-84 314.7 183 84.7
Manes.01G100100 Manihot esculenta HOM05D004464 ORTHO05D005135 4.7e-84 314.7 183 83.6
Thecc.01G298100 Theobroma cacao HOM05D004464 ORTHO05D005135 1.4e-83 313.2 183 84.2
Sabra10G0012000 Salix brachista HOM05D004464 ORTHO05D005135 1.8e-83 312.8 190 80.5
COL.COLO4_21291 Corchorus olitorius HOM05D004464 ORTHO05D005135 3.0e-83 312.0 183 83.6
PGSC0003DMG400001469 Solanum tuberosum HOM05D004464 ORTHO05D005135 3.0e-83 312.0 183 83.1
Sopen02g034060 Solanum pennellii HOM05D004464 ORTHO05D005135 4.0e-83 311.6 183 83.1
Cc07_g04530 Coffea canephora HOM05D004464 ORTHO05D005135 5.2e-83 311.2 183 83.6
Solyc02g089280.3 Solanum lycopersicum HOM05D004464 ORTHO05D005135 5.2e-83 311.2 183 83.1
CANSAT11G0238 Cannabis sativa HOM05D004464 ORTHO05D005135 8.9e-83 310.5 183 80.9
Nitab4.5_0001339g0030 Nicotiana tabacum HOM05D004464 ORTHO05D005135 8.9e-83 310.5 183 82.0
Phvul.007G072900 Phaseolus vulgaris HOM05D004464 ORTHO05D005135 1.2e-82 310.1 183 81.4
MBI15_g04989_MAGBIO Magnolia biondii HOM05D004464 ORTHO05D005135 1.5e-82 309.7 183 82.0
MBI15_g11301_MAGBIO Magnolia biondii HOM05D004464 ORTHO05D005135 1.5e-82 309.7 183 82.0
MD17G1066400 Malus domestica HOM05D004464 ORTHO05D005135 1.5e-82 309.7 183 82.0
Prupe.3G248300 Prunus persica HOM05D004464 ORTHO05D005135 1.5e-82 309.7 183 82.5
CDE10G0456 Ceratophyllum demersum HOM05D004464 ORTHO05D005135 2.0e-82 309.3 183 81.4
Glyma.10G232700 Glycine max HOM05D004464 ORTHO05D005135 2.0e-82 309.3 183 81.4
Glyma.20G161600 Glycine max HOM05D004464 ORTHO05D005135 2.0e-82 309.3 183 81.4
SGA_v2.0_scaffold163G37992 Striga asiatica HOM05D004464 ORTHO05D005135 4.4e-82 308.1 183 83.1
CANSAT64G2552 Cannabis sativa HOM05D004464 ORTHO05D005135 7.5e-82 307.4 183 79.8
Peaxi162Scf01039g00131 Petunia axillaris HOM05D004464 ORTHO05D005135 1.3e-81 306.6 183 82.5
MD09G1075700 Malus domestica HOM05D004464 ORTHO05D005135 2.2e-81 305.8 183 80.9
CDE10G0562 Ceratophyllum demersum HOM05D004464 ORTHO05D005135 4.9e-81 304.7 183 82.0
Hund16239 Selenicereus undatus HOM05D004464 ORTHO05D005135 4.9e-81 304.7 183 80.3
TWI36G0525 Tripterygium wilfordii HOM05D004464 ORTHO05D005135 4.9e-81 304.7 183 79.8
TWI36G0787 Tripterygium wilfordii HOM05D004464 ORTHO05D005135 4.9e-81 304.7 183 79.8
ClCG07G016070 Citrullus lanatus HOM05D004464 ORTHO05D005135 8.3e-81 303.9 182 78.6
TWI75G1858 Tripterygium wilfordii HOM05D004464 ORTHO05D005135 8.3e-81 303.9 183 79.8
DCAR_016093 Daucus carota HOM05D004464 ORTHO05D005135 1.4e-80 303.1 183 79.2
CAN.G497.54 Capsicum annuum HOM05D004464 ORTHO05D005135 2.4e-80 302.4 183 80.3
VMungo0720G0545 Vigna mungo HOM05D004464 ORTHO05D005135 2.4e-80 302.4 183 80.3
Lj3g0020854 Lotus japonicus HOM05D004464 ORTHO05D005135 3.1e-80 302.0 183 79.8
Lj4g0017621 Lotus japonicus HOM05D004464 ORTHO05D005135 3.1e-80 302.0 183 79.8
Medtr8g102530 Medicago truncatula HOM05D004464 ORTHO05D005135 4.1e-80 301.6 183 77.6
THA.LOC104820981 Tarenaya hassleriana HOM05D004464 ORTHO05D005135 1.2e-79 300.1 181 80.1
EL10Ac2g04433 Beta vulgaris HOM05D004464 ORTHO05D005135 1.6e-79 299.7 183 78.7
CsaV3_4G010040 Cucumis sativus L. HOM05D004464 ORTHO05D005135 1.6e-79 299.7 182 76.9
Ah.16g101000 Amaranthus hybridus HOM05D004464 ORTHO05D005135 3.5e-79 298.5 183 78.7
ATR0743G033 Amborella trichopoda HOM05D004464 ORTHO05D005135 3.5e-79 298.5 183 78.7
FvH4_6g46310 Fragaria vesca HOM05D004464 ORTHO05D005135 3.5e-79 298.5 183 78.1
FAN02G0274 Fragaria x ananassa HOM05D004464 ORTHO05D005135 3.5e-79 298.5 183 78.1
FAN14G2017 Fragaria x ananassa HOM05D004464 ORTHO05D005135 3.5e-79 298.5 183 78.1
Psat7g017000 Pisum sativum HOM05D004464 ORTHO05D005135 4.5e-79 298.1 183 77.0
Sed0009719 Sechium edule HOM05D004464 ORTHO05D005135 5.9e-79 297.7 182 76.4
arahy.Tifrunner.gnm1.ann1.6V5APJ Arachis hypogaea HOM05D004464 ORTHO05D005135 7.8e-79 297.4 183 77.0
arahy.Tifrunner.gnm1.ann1.AQQ1ZC Arachis hypogaea HOM05D004464 ORTHO05D005135 7.8e-79 297.4 183 77.0
FAN05G3637 Fragaria x ananassa HOM05D004464 ORTHO05D005135 1.3e-78 296.6 183 77.6
vmacro18124 Vaccinium macrocarpon HOM05D004464 ORTHO05D005135 1.3e-78 296.6 182 80.2
unitig_0.g1789 Utricularia gibba HOM05D004464 ORTHO05D005135 1.7e-78 296.2 182 79.1
FAN09G0031 Fragaria x ananassa HOM05D004464 ORTHO05D005135 2.3e-78 295.8 183 77.6
RcHm_v2.0_Chr2g0164761 Rosa chinensis HOM05D004464 ORTHO05D005135 2.3e-78 295.8 183 77.6
AL6G26590 Arabidopsis lyrata HOM05D004464 ORTHO05D005135 5.0e-78 294.7 179 79.9
Ah.10g038200 Amaranthus hybridus HOM05D004464 ORTHO05D005135 6.6e-78 294.3 183 77.6
Lalb_Chr16g0389591 Lupinus albus HOM05D004464 ORTHO05D005135 8.6e-78 293.9 183 76.0
Sc07g0002150 Simmondsia chinensis HOM05D004464 ORTHO05D005135 8.6e-78 293.9 181 78.5
TPR.G29907 Trifolium pratense HOM05D004464 ORTHO05D005135 8.6e-78 293.9 183 74.3
QL09p044371 Quercus lobata HOM05D004464 ORTHO05D005135 1.9e-77 292.7 184 77.7
TPR.G23462 Trifolium pratense HOM05D004464 ORTHO05D005135 3.3e-77 292.0 183 74.3
Aa31LG11G13830 Aethionema arabicum HOM05D004464 ORTHO05D005135 5.6e-77 291.2 179 78.2
AT5G15750 Arabidopsis thaliana HOM05D004464 ORTHO05D005135 5.6e-77 291.2 181 77.3
BcaNung02202 Brassica carinata HOM05D004464 ORTHO05D005135 5.6e-77 291.2 181 76.8
AUR62023152 Chenopodium quinoa HOM05D004464 ORTHO05D005135 5.6e-77 291.2 183 77.6
Aa31LG2G910 Aethionema arabicum HOM05D004464 ORTHO05D005135 9.5e-77 290.4 179 77.7
AUR62009474 Chenopodium quinoa HOM05D004464 ORTHO05D005135 1.2e-76 290.0 183 77.6
PSO782G4050 Papaver somniferum HOM05D004464 ORTHO05D005135 3.6e-76 288.5 183 78.7
BcaC03g18447 Brassica carinata HOM05D004464 ORTHO05D005135 4.7e-76 288.1 181 76.8
C02p07950 Brassica napus HOM05D004464 ORTHO05D005135 4.7e-76 288.1 181 76.8
BolC2t06718H Brassica oleracea HOM05D004464 ORTHO05D005135 4.7e-76 288.1 181 76.8
CiPaw.15G080600 Carya illinoinensis HOM05D004464 ORTHO05D005135 6.1e-76 287.7 184 73.9
A02p03200 Brassica napus HOM05D004464 ORTHO05D005135 8.0e-76 287.3 181 76.8
BraA02t05291Z Brassica rapa HOM05D004464 ORTHO05D005135 8.0e-76 287.3 181 76.8
BcaB01g05028 Brassica carinata HOM05D004464 ORTHO05D005135 1.0e-75 287.0 181 75.7
C03p08530 Brassica napus HOM05D004464 ORTHO05D005135 1.4e-75 286.6 181 75.1
PSO198G0095 Papaver somniferum HOM05D004464 ORTHO05D005135 1.8e-75 286.2 183 78.1
Oeu033412.2 Olea europaea HOM05D004464 ORTHO05D005135 2.3e-75 285.8 228 65.8
BraA03t10058Z Brassica rapa HOM05D004464 ORTHO05D005135 3.0e-75 285.4 181 74.6
CiPaw.06G059900 Carya illinoinensis HOM05D004464 ORTHO05D005135 3.0e-75 285.4 184 73.9
Sp6g28370 Schrenkiella parvula HOM05D004464 ORTHO05D005135 3.0e-75 285.4 179 76.5
Aqoxy3G02935 Aquilegia oxysepala HOM05D004464 ORTHO05D005135 5.2e-75 284.6 183 74.9
Carub.0004s0609 Capsella rubella HOM05D004464 ORTHO05D005135 5.2e-75 284.6 179 77.1
Cfa007699 Carpinus fangiana HOM05D004464 ORTHO05D005135 5.2e-75 284.6 184 76.1
A03p07340 Brassica napus HOM05D004464 ORTHO05D005135 6.8e-75 284.3 181 74.6
Carub.0006s1390 Capsella rubella HOM05D004464 ORTHO05D005135 2.0e-74 282.7 179 77.1
PSO017G3712 Papaver somniferum HOM05D004464 ORTHO05D005135 2.6e-74 282.3 183 76.0
QL02p065152 Quercus lobata HOM05D004464 ORTHO05D005135 2.6e-74 282.3 184 73.9
CARHR197580 Cardamine hirsuta HOM05D004464 ORTHO05D005135 1.3e-73 280.0 179 75.4
ECA285G0012 Erigeron canadensis HOM05D004464 ORTHO05D005135 2.4e-72 275.8 185 73.0
Mapoly0007s0196 Marchantia polymorpha HOM05D004464 ORTHO05D005135 3.2e-72 275.4 183 69.9
MCO12G368 Micromonas commoda HOM05D004464 ORTHO05D005135 2.7e-71 272.3 182 71.4
DCAR_010215 Daucus carota HOM05D004464 ORTHO05D005135 3.5e-71 271.9 219 64.4
SHI12226 Sapria himalayana HOM05D004464 ORTHO05D005135 7.8e-71 270.8 184 69.0
SMO089G0012 Selaginella moellendorffii HOM05D004464 ORTHO05D005135 5.0e-70 268.1 183 69.4
Nitab4.5_0009887g0020 Nicotiana tabacum HOM05D004464 ORTHO05D005135 2.5e-69 265.8 152 83.6
Pp3c13_7750 Physcomitrium patens HOM05D004464 ORTHO05D005135 3.3e-69 265.4 183 68.3
Atru.chr5.3325 Acer truncatum HOM05D004464 ORTHO05D005135 6.8e-67 257.7 183 72.7
Duzib170G0747 Durio zibethinus HOM05D004464 ORTHO05D005135 4.4e-66 255.0 183 72.1
Ca_17363_v3 Cicer arietinum L. HOM05D002451 ORTHO05D007901 9.8e-66 253.8 155 75.5
TAR629G1609 Trochodendron aralioides HOM05D004464 ORTHO05D005135 9.8e-66 253.8 155 79.4
Glyma.16G058000 Glycine max HOM05D004464 ORTHO05D005135 6.4e-65 251.1 152 79.6
Cre03.g170750 Chlamydomonas reinhardtii HOM05D004464 ORTHO05D005135 7.0e-64 247.7 181 63.5
Lsat_1_v5_gn_3_96881 Lactuca sativa HOM05D004464 ORTHO05D005135 1.5e-61 240.0 181 68.0
Haze_14377 Corylus avellana HOM05D004464 ORTHO05D005135 2.5e-61 239.2 188 68.1
Zm00001eb280020 Zea mays HOM05D004464 ORTHO05D005135 8.1e-60 234.2 181 65.2
Thhalv10014794m.g Eutrema salsugineum HOM05D004464 ORTHO05D005135 1.5e-58 229.9 136 79.4
PSO478G4867 Papaver somniferum HOM05D004464 ORTHO05D005135 4.4e-58 228.4 183 66.1
SEGI_12415 Sequoiadendron giganteum HOM05D004464 ORTHO05D005135 3.9e-54 215.3 138 72.5
Nn3g17540 Nelumbo nucifera HOM05D004464 ORTHO05D005135 3.3e-53 212.2 183 62.8
HPP92_025702 Vanilla planifolia HOM05D004464 ORTHO05D005135 3.1e-51 205.7 150 68.7
SMO302G0020 Selaginella moellendorffii HOM05D004464 ORTHO05D005135 5.8e-50 201.4 175 59.4
AagrBONN_evm.TU.Sc2ySwM_362.1773 Anthoceros agrestis HOM05D004464 ORTHO05D005135 1.7e-49 199.9 152 64.5
Gorai.007G357000 Gossypium raimondii HOM05D004464 ORTHO05D005135 7.1e-48 194.5 179 59.8
BcaNung00660 Brassica carinata HOM05D004464 ORTHO05D005135 5.1e-46 188.3 158 58.9
Rhsim08G0077600 Rhododendron simsii HOM05D004464 ORTHO05D005135 5.6e-45 184.9 123 73.2
Cpa.g.sc14.239 Carica papaya HOM05D004464 ORTHO05D005135 1.2e-44 183.7 102 86.3
Lju361C7T5 Lonicera japonica HOM05D004464 ORTHO05D005135 2.1e-44 183.0 100 87.0
MELO3C000036.2 Cucumis melo HOM05D004464 ORTHO05D005135 3.6e-44 182.2 154 58.4
Gorai.007G356600 Gossypium raimondii HOM05D004464 ORTHO05D005135 9.9e-42 174.1 100 84.0
Cfa025099 Carpinus fangiana HOM05D002539 ORTHO05D005135 1.3e-41 173.7 186 46.8
Gorai.007G357200 Gossypium raimondii HOM05D004464 ORTHO05D005135 2.2e-41 172.9 99 82.8
BcaNung00661 Brassica carinata HOM05D004464 ORTHO05D005135 2.1e-39 166.4 158 54.4
CBR_g26031 Chara braunii HOM05D004464 ORTHO05D005135 2.7e-39 166.0 146 56.2
BolC3t13358H Brassica oleracea HOM05D004464 ORTHO05D005135 2.5e-37 159.5 106 71.7
AagrBONN_evm.TU.Sc2ySwM_344.90 Anthoceros agrestis HOM05D004464 ORTHO05D005135 1.1e-35 154.1 134 59.7
ECA246G0747 Erigeron canadensis HOM05D004464 ORTHO05D005135 4.5e-34 148.7 105 67.6
Lju361A7T16 Lonicera japonica HOM05D004464 ORTHO05D005135 1.9e-32 143.3 81 85.2
BolC1t00394H Brassica oleracea HOM05D004464 ORTHO05D005135 2.5e-29 132.9 99 63.6
Oeu003765.1 Olea europaea HOM05D007961 ORTHO05D005135 9.6e-29 131.0 78 80.8
MELO3C001556.2 Cucumis melo HOM05D004464 ORTHO05D005135 1.2e-26 124.0 81 71.6
SHI12394 Sapria himalayana HOM05D004464 ORTHO05D005135 7.6e-26 121.3 106 57.5
AagrBONN_evm.TU.Sc2ySwM_368.3154 Anthoceros agrestis HOM05D004464 ORTHO05D005135 2.2e-25 119.8 101 60.4
SHI40216 Sapria himalayana HOM05D004464 ORTHO05D005135 1.4e-19 100.5 68 64.7
Thecc.01G298200 Theobroma cacao HOM05D004464 ORTHO05D005135 5.5e-16 88.6 106 50.0
MELO3C000032.2 Cucumis melo HOM05D004464 ORTHO05D005135 2.1e-15 86.7 52 76.9
C09p61360 Brassica napus HOM05D004464 ORTHO05D005135 1.3e-12 77.4 127 42.5
Os04g0662100 Oryza sativa ssp. japonica HOM05D004464 ORTHO05D005135 1.4e-06 57.4 37 70.3
BcaC04g18941 Brassica carinata HOM05D004464 ORTHO05D005135 2.3e-06 56.6 87 40.2
BolC9t58977H Brassica oleracea HOM05D004464 ORTHO05D005135 2.3e-06 56.6 81 43.2
MCO09G009 Micromonas commoda HOM05D001645 ORTHO05D001749 5.1e-06 55.5 130 26.9


User provided reference genes

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